Result of FASTA (omim) for
pFN21AE3289
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3289, 745 aa
1>>>pF1KE3289 745 - 745 aa - 745 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9119+/-0.000394; mu= 17.5052+/- 0.024
mean_var=86.4137+/-17.705, 0's: 0 Z-trim(112.9): 27 B-trim: 94 in 1/53
Lambda= 0.137969
statistics sampled from 21974 (21992) to 21974 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.609), E-opt: 0.2 (0.258), width: 16
Scan time: 12.230
The best scores are: opt bits E(85289)
XP_011534479 (OMIM: 609101) PREDICTED: F-box only ( 745) 5095 1024.8 0
XP_016866842 (OMIM: 609101) PREDICTED: F-box only ( 745) 5095 1024.8 0
NP_115521 (OMIM: 609101) F-box only protein 30 [Ho ( 745) 5095 1024.8 0
XP_005267216 (OMIM: 609101) PREDICTED: F-box only ( 745) 5095 1024.8 0
NP_057382 (OMIM: 609107) F-box only protein 40 [Ho ( 709) 601 130.2 2.8e-29
>>XP_011534479 (OMIM: 609101) PREDICTED: F-box only prot (745 aa)
initn: 5095 init1: 5095 opt: 5095 Z-score: 5480.6 bits: 1024.8 E(85289): 0
Smith-Waterman score: 5095; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)
10 20 30 40 50 60
pF1KE3 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP
670 680 690 700 710 720
730 740
pF1KE3 LPCMCVTRELTKEGRSLRSVLKPVL
:::::::::::::::::::::::::
XP_011 LPCMCVTRELTKEGRSLRSVLKPVL
730 740
>>XP_016866842 (OMIM: 609101) PREDICTED: F-box only prot (745 aa)
initn: 5095 init1: 5095 opt: 5095 Z-score: 5480.6 bits: 1024.8 E(85289): 0
Smith-Waterman score: 5095; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)
10 20 30 40 50 60
pF1KE3 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP
670 680 690 700 710 720
730 740
pF1KE3 LPCMCVTRELTKEGRSLRSVLKPVL
:::::::::::::::::::::::::
XP_016 LPCMCVTRELTKEGRSLRSVLKPVL
730 740
>>NP_115521 (OMIM: 609101) F-box only protein 30 [Homo s (745 aa)
initn: 5095 init1: 5095 opt: 5095 Z-score: 5480.6 bits: 1024.8 E(85289): 0
Smith-Waterman score: 5095; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)
10 20 30 40 50 60
pF1KE3 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP
670 680 690 700 710 720
730 740
pF1KE3 LPCMCVTRELTKEGRSLRSVLKPVL
:::::::::::::::::::::::::
NP_115 LPCMCVTRELTKEGRSLRSVLKPVL
730 740
>>XP_005267216 (OMIM: 609101) PREDICTED: F-box only prot (745 aa)
initn: 5095 init1: 5095 opt: 5095 Z-score: 5480.6 bits: 1024.8 E(85289): 0
Smith-Waterman score: 5095; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)
10 20 30 40 50 60
pF1KE3 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPFERVPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVDEVAQL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVDEESYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKDQDHLY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQVIDQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGTVQHILMPDDE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAILATSTMVGEIASA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFRRKEFSSHFKNVH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPCVSTVLVEP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARNCVLGLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMRDVCGSLLQSRGMVILQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHLKKCSYNVVEKREEAIP
670 680 690 700 710 720
730 740
pF1KE3 LPCMCVTRELTKEGRSLRSVLKPVL
:::::::::::::::::::::::::
XP_005 LPCMCVTRELTKEGRSLRSVLKPVL
730 740
>>NP_057382 (OMIM: 609107) F-box only protein 40 [Homo s (709 aa)
initn: 1544 init1: 578 opt: 601 Z-score: 646.5 bits: 130.2 E(85289): 2.8e-29
Smith-Waterman score: 1464; 35.6% identity (65.8% similar) in 748 aa overlap (6-742:11-700)
10 20 30 40 50
pF1KE3 MEEELQHSHCVNCVSRRCMTRPEPGISCDLIGCPLVCGAVFHSCKADEHRLLCPF
.: :: .: .:.: ::. :: .:.: :.:::.:: :: ::.::::.
NP_057 MGKARRSPPGHHRHCEGCFNRHCHIPVEPNTSCLVISCHLLCGATFHMCKEAEHQLLCPL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 ERVPCLNSDFGCPFTMARNKVAEHLEMCPASVVCCTMEWNRWPVSYADRKSYENLSRDVD
:.::::::..:::..:.:.:.:.::..::::::::.::::::: .. .::. ...
NP_057 EQVPCLNSEYGCPLSMSRHKLAKHLQVCPASVVCCSMEWNRWPNVDSETTLHENIMKETP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 EVAQLDMALALQDQRMLLESLKVATMMSKATDKVSKPREQISVKSSVPEIPHANGLVSVD
:: :::::::..:..:::.. .. . : .... . .. ..:: :. : : :..
NP_057 SEECLDTALALQDQKVLFRSLKMVELFPE-TREATEEEPTMNGETSVEEMGGAVGGVDI-
130 140 150 160 170
180 190 200 210 220 230
pF1KE3 EESYGALYQATVETTRSLAAALDILNTATRDIGMLNTSVPNDMDEQQNARESLEDQNLKD
: . .. :. .: :. :.. ...:... .. .
NP_057 ----GLVPHGLSATNGEMAE----LSQEEREV-------------LAKTKEGMDLVKFGQ
180 190 200 210
240 250 260 270 280 290
pF1KE3 QDHLYEEEIGAVGGIDYNDTNQNAQSEQNGSSDLLCDLNTSSYDTSALCNGFPLENICTQ
.... .: :.... ::..:. :.....: . .:... . .: : . .
NP_057 WENIFSKE-HAASAL----TNSSASCESKNKNDSEKEQISSGHNM-VEGEGAPKK----K
220 230 240 250 260
300 310 320 330 340 350
pF1KE3 VIDQNQNLHGDSKQSNLTNGDCVASSDGTSKPSSSLAVAAQLREIIPSSALPNGT--VQH
..::. . : . . :.: . .::. . .. :: :. .. . :: ..
NP_057 EPQENQKQQ-DVRTAMETTG-LAPWQDGVLERLKT-AVDAKDYNMY---LVHNGRMLIHF
270 280 290 300 310 320
360 370 380 390 400
pF1KE3 ILMPD-DEGEGELCWKKVDLGDVKNVDVLSF--SHAPSFNFLSNSCWS-KPKEDKAVDTS
:: : .. . :.. .::.: ... :. . :... : ::.: ::::::
NP_057 GQMPACTPKERDFVYGKLEAQEVKTVYTFKVPVSYCGKRARLGDAMLSCKPSEHKAVDTS
330 340 350 360 370 380
410 420 430 440 450 460
pF1KE3 DLEVA-EDPMGLQGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSLPSAIL
:: .. :: : ::: ..: : :. ::.:: : .: .:::... .
NP_057 DLGITVED---LPKSDLIKTTLQCALERELKGHVISESRSIDGLFMDFATQTYNFEPEQF
390 400 410 420 430
470 480 490 500 510 520
pF1KE3 ATSTMVGEIASASACDHANPQLSNPSPFQTLGLDLVLECVARYQPKQRSMFTFVCGQLFR
...:.......:. :. : ..: :::.: . :. : :::.:...::
NP_057 SSGTVLADLTAAT-----------PG---GLHVELHSECVTRRHNKSSSAFTFTCNKFFR
440 450 460 470 480
530 540 550 560 570 580
pF1KE3 RKEFSSHFKNVHGDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSIQGAKIIHDRHLRSFG
: :: :::::: ::.. ::::...:::::: :::. : .: : : ::.:....:..:.
NP_057 RDEFPLHFKNVHTDIQSCLNGWFQHRCPLAYLGCTFVQNHFRPPGQKAKVIYSQELKTFA
490 500 510 520 530 540
590 600 610 620 630 640
pF1KE3 VQPCVSTVLVEPARNCVL----GLHNDHLSSLPFEVLQHIAGFLDGFSLCQLSCVSKLMR
..: :. : : .: : : .. :.:::.:.:..::::::. :: ::: :: :::
NP_057 IKPEVAPELSEGRKNNHLLGHGGKSQNSLTSLPLEILKYIAGFLDSVSLAQLSQVSVLMR
550 560 570 580 590 600
650 660 670 680 690 700
pF1KE3 DVCGSLLQSRGMVILQWGKRKYPEGNSSWQIKEKVWRFSTAFCSVNEWKFADILSMADHL
..:..::: ::::.::: :..: .:..::......:.::. : ... :.: .. ::..::
NP_057 NICATLLQERGMVLLQWKKKRYSHGGTSWRVHREIWQFSSLFSKIKSWEFNEVTSMSEHL
610 620 630 640 650 660
710 720 730 740
pF1KE3 KKCSYNVVEKREEAIPLPCMCVTRELTKEGRSLRSVLKPVL
:.: .:.::.. . : : :: :: ..: :: :...
NP_057 KSCPFNIVEHKTDPILLTSMCQPREQARE--SLVSTFRIRPRGRYVS
670 680 690 700
745 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 03:37:19 2016 done: Mon Nov 7 03:37:21 2016
Total Scan time: 12.230 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]