FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3261, 626 aa
  1>>>pF1KE3261 626 - 626 aa - 626 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5022+/-0.000824; mu= 18.3629+/- 0.050
 mean_var=72.1873+/-14.612, 0's: 0 Z-trim(107.5): 21  B-trim: 2 in 1/50
 Lambda= 0.150954
 statistics sampled from 9602 (9608) to 9602 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.295), width:  16
 Scan time:  3.600

The best scores are:                                      opt bits E(32554)
CCDS5861.1 ADCK2 gene_id:90956|Hs108|chr7          ( 626) 4137 910.4       0


>>CCDS5861.1 ADCK2 gene_id:90956|Hs108|chr7               (626 aa)
 initn: 4137 init1: 4137 opt: 4137  Z-score: 4865.4  bits: 910.4 E(32554):    0
Smith-Waterman score: 4137; 99.7% identity (99.8% similar) in 626 aa overlap (1-626:1-626)

               10        20        30        40        50        60
pF1KE3 MVAPWRVSVRVCLSHLRCFELRQGLSLLRPSECPRDARLCWLLLGTLPKVVSLCGDVGEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MVAPWRVSVRVCLSHLRCFELRQGLSLLRPSECPRDARLCWLLLGTLPKVVSLCGDVGEG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 APDVLGRRRVRCSGAAGAGPAESLPRAGPLGGVFLHLRLWLRAGALLVKFFPLLLLYPLT
       :::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 APDVLSRRRVRCSGAAGAGPAESLPRAGPLGGVFLHLRLWLRAGALLVKFFPLLLLYPLT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 YLAPSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YLAPSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 HTERFLRQAFGDDWGSILSFENREPVGSGCVAQVYKAYANTAFLETDSVQRLGRASCLPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HTERFLRQAFGDDWGSILSFENREPVGSGCVAQVYKAYANTAFLETDSVQRLGRASCLPP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 FSHTGAVGGLRELFGYLGNGRKPPENLADQSFLERLLLPKADLVGSNAGVSRAQVPGHQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FSHTGAVGGLRELFGYLGNGRKPPENLADQSFLERLLLPKADLVGSNAGVSRAQVPGHQP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 EATNLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQ
       :::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQ
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE3 IDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSSYQQAGIPVDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSSYQQAGIPVDL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE3 KRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSSQEAQLQQADICDTLVVAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSSQEAQLQQADICDTLVVAV
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE3 PSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARASECRDVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARASECRDVE
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE3 GFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGL
              550       560       570       580       590       600

              610       620      
pF1KE3 GRSLDPKLDILEAARPFLLTGPVCPP
       ::::::::::::::::::::::::::
CCDS58 GRSLDPKLDILEAARPFLLTGPVCPP
              610       620      




626 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 23:36:26 2016 done: Sat Nov  5 23:36:27 2016
 Total Scan time:  3.600 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]