FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3115, 291 aa
  1>>>pF1KE3115 291 - 291 aa - 291 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8437+/-0.00082; mu= 18.3430+/- 0.050
 mean_var=70.6364+/-14.199, 0's: 0 Z-trim(107.7): 36  B-trim: 0 in 0/50
 Lambda= 0.152602
 statistics sampled from 9744 (9766) to 9744 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.3), width:  16
 Scan time:  2.520

The best scores are:                                      opt bits E(32554)
CCDS31307.1 METTL10 gene_id:399818|Hs108|chr10     ( 291) 1946 437.3 6.4e-123


>>CCDS31307.1 METTL10 gene_id:399818|Hs108|chr10          (291 aa)
 initn: 1946 init1: 1946 opt: 1946  Z-score: 2320.3  bits: 437.3 E(32554): 6.4e-123
Smith-Waterman score: 1946; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)

               10        20        30        40        50        60
pF1KE3 MSSGADGGGGAAVAARSDKGSPGEDGFVPSALGTREHWDAVYERELQTFREYGDTGEIWF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MSSGADGGGGAAVAARSDKGSPGEDGFVPSALGTREHWDAVYERELQTFREYGDTGEIWF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 GEESMNRLIRWMQKHKIPLDASVLDIGTGNGVFLVELAKFGFSNITGIDYSPSAIQLSGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GEESMNRLIRWMQKHKIPLDASVLDIGTGNGVFLVELAKFGFSNITGIDYSPSAIQLSGS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 IIEKEGLSNIKLKVEDFLNLSTQLSGFHICIDKGTFDAISLNPDNAIEKRKQYVKSLSRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IIEKEGLSNIKLKVEDFLNLSTQLSGFHICIDKGTFDAISLNPDNAIEKRKQYVKSLSRV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 LKVKGFFLITSCNWTKEELLNEFSEGWSTVAGFWLTAALTSWAQAIFSTSASRVGGTTGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LKVKGFFLITSCNWTKEELLNEFSEGWSTVAGFWLTAALTSWAQAIFSTSASRVGGTTGT
              190       200       210       220       230       240

              250       260       270       280       290 
pF1KE3 HHHAWIIFVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGLYHARPSLAF
       :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 HHHAWIIFVFLAETRFCHVVQAGLELLGSSDSPTWPPKVLGLYHARPSLAF
              250       260       270       280       290 




291 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 12:36:24 2016 done: Sun Nov  6 12:36:24 2016
 Total Scan time:  2.520 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]