Result of FASTA (ccds) for
pFN21AE3095
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3095, 263 aa
1>>>pF1KE3095 263 - 263 aa - 263 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3637+/-0.000822; mu= 14.4162+/- 0.049
mean_var=65.2373+/-12.888, 0's: 0 Z-trim(106.8): 27 B-trim: 0 in 0/51
Lambda= 0.158791
statistics sampled from 9183 (9208) to 9183 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.283), width: 16
Scan time: 2.330
The best scores are: opt bits E(32554)
CCDS3099.1 NME9 gene_id:347736|Hs108|chr3 ( 263) 1757 411.1 4e-115
CCDS4197.1 NME5 gene_id:8382|Hs108|chr5 ( 212) 287 74.3 7.9e-14
CCDS77734.1 NME6 gene_id:10201|Hs108|chr3 ( 186) 278 72.2 2.9e-13
CCDS2763.1 NME6 gene_id:10201|Hs108|chr3 ( 194) 278 72.2 3.1e-13
CCDS44274.1 NME7 gene_id:29922|Hs108|chr1 ( 340) 278 72.3 4.9e-13
CCDS1277.1 NME7 gene_id:29922|Hs108|chr1 ( 376) 278 72.3 5.4e-13
CCDS5452.1 NME8 gene_id:51314|Hs108|chr7 ( 588) 279 72.7 6.7e-13
>>CCDS3099.1 NME9 gene_id:347736|Hs108|chr3 (263 aa)
initn: 1757 init1: 1757 opt: 1757 Z-score: 2180.3 bits: 411.1 E(32554): 4e-115
Smith-Waterman score: 1757; 100.0% identity (100.0% similar) in 263 aa overlap (1-263:1-263)
10 20 30 40 50 60
pF1KE3 MLSSKGLTVVDVYQGWCGPCKPVVSLFQKMRIEVGLDLLHFALAEADRLDVLEKYRGKCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MLSSKGLTVVDVYQGWCGPCKPVVSLFQKMRIEVGLDLLHFALAEADRLDVLEKYRGKCE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 PTFLFYAIKDEALSDEDECVSHGKNNGEDEDMVSSERTCTLAIIKPDAVAHGKTDEIIMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 PTFLFYAIKDEALSDEDECVSHGKNNGEDEDMVSSERTCTLAIIKPDAVAHGKTDEIIMK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 IQEAGFEILTNEERTMTEAEVRLFYQHKAGEEAFEKLVHHMCSGPSHLLILTRTEGFEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 IQEAGFEILTNEERTMTEAEVRLFYQHKAGEEAFEKLVHHMCSGPSHLLILTRTEGFEDV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VTTWRTVMGPRDPNVARREQPESLRAQYGTEMPFNAVHGSRDREDADRELALLFPSLKFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VTTWRTVMGPRDPNVARREQPESLRAQYGTEMPFNAVHGSRDREDADRELALLFPSLKFS
190 200 210 220 230 240
250 260
pF1KE3 DKDTEAPQGESSTQPRLKITDLD
:::::::::::::::::::::::
CCDS30 DKDTEAPQGESSTQPRLKITDLD
250 260
>>CCDS4197.1 NME5 gene_id:8382|Hs108|chr5 (212 aa)
initn: 286 init1: 168 opt: 287 Z-score: 361.8 bits: 74.3 E(32554): 7.9e-14
Smith-Waterman score: 287; 39.0% identity (63.2% similar) in 136 aa overlap (100-235:15-144)
70 80 90 100 110 120
pF1KE3 DEALSDEDECVSHGKNNGEDEDMVSSERTCTLAIIKPDAVAHGKTDEIIMKIQEAGFEIL
:::::::: : : .:: : ..:: :.
CCDS41 MEISMPPPQIYVEKTLAIIKPDIV--DKEEEIQDIILRSGFTIV
10 20 30 40
130 140 150 160 170 180
pF1KE3 TNEERTMTEAEVRLFYQHKAGEEAFEKLVHHMCSGPSHLLILTRTEGFEDVVTTWRTVMG
.. .. . :: .: :. : .:. .: ::: .::.: . ... : ..:
CCDS41 QRRKLRLSPEQCSNFYVEKYGKMFFPNLTAYMSSGPLVAMILARHK----AISYWLELLG
50 60 70 80 90
190 200 210 220 230 240
pF1KE3 PRDPNVARREQPESLRAQYGTEMPFNAVHGSRDREDADRELALLFPSLKFSDKDTEAPQG
: . ::.. .:.:::: :::. ::.::: : :.::. ..::
CCDS41 PNNSLVAKETHPDSLRAIYGTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAK
100 110 120 130 140 150
250 260
pF1KE3 ESSTQPRLKITDLD
CCDS41 DYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
160 170 180 190 200 210
>>CCDS77734.1 NME6 gene_id:10201|Hs108|chr3 (186 aa)
initn: 256 init1: 141 opt: 278 Z-score: 351.5 bits: 72.2 E(32554): 2.9e-13
Smith-Waterman score: 278; 35.9% identity (62.7% similar) in 153 aa overlap (100-248:14-160)
70 80 90 100 110 120
pF1KE3 DEALSDEDECVSHGKNNGEDEDMVSSERTCTLAIIKPDAVAHGKTDEII-MKIQEAGFEI
:::.:::::::: : . ..: : :
CCDS77 MASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLI
10 20 30 40
130 140 150 160 170 180
pF1KE3 LTNEERTMTEAEVRLFYQHKAGEEAFEKLVHHMCSGPSHLLILTRTEGFEDVVTTWRTVM
. .: . . . ::... :. ...::. : ::: . ::.. .:.. :::.:
CCDS77 VRMRELLWRKEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAH----KDAIQLWRTLM
50 60 70 80 90
190 200 210 220 230 240
pF1KE3 GPRDPNVARREQPESLRAQYGTEMPFNAVHGSRDREDADRELALLFPSLKFSDK---DTE
:: ::. :.:.:...: :..::: . .:.::.: .::. ::.. . :
CCDS77 GPTRVFRARHVAPDSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPD--FSEQRWYEEE
100 110 120 130 140 150
250 260
pF1KE3 APQGESSTQPRLKITDLD
::
CCDS77 EPQLRCGPVCYSPEGGVHYVAGTGGLGPA
160 170 180
>>CCDS2763.1 NME6 gene_id:10201|Hs108|chr3 (194 aa)
initn: 256 init1: 141 opt: 278 Z-score: 351.2 bits: 72.2 E(32554): 3.1e-13
Smith-Waterman score: 278; 35.9% identity (62.7% similar) in 153 aa overlap (100-248:22-168)
70 80 90 100 110 120
pF1KE3 DEALSDEDECVSHGKNNGEDEDMVSSERTCTLAIIKPDAVAHGKTDEII-MKIQEAGFEI
:::.:::::::: : . ..: : :
CCDS27 MTQNLGSEMASILRSPQALQLTLALIKPDAVAHPLILEAVHQQILSNKFLI
10 20 30 40 50
130 140 150 160 170 180
pF1KE3 LTNEERTMTEAEVRLFYQHKAGEEAFEKLVHHMCSGPSHLLILTRTEGFEDVVTTWRTVM
. .: . . . ::... :. ...::. : ::: . ::.. .:.. :::.:
CCDS27 VRMRELLWRKEDCQRFYREHEGRFFYQRLVEFMASGPIRAYILAH----KDAIQLWRTLM
60 70 80 90 100
190 200 210 220 230 240
pF1KE3 GPRDPNVARREQPESLRAQYGTEMPFNAVHGSRDREDADRELALLFPSLKFSDK---DTE
:: ::. :.:.:...: :..::: . .:.::.: .::. ::.. . :
CCDS27 GPTRVFRARHVAPDSIRGSFGLTDTRNTTHGSDSVVSASREIAAFFPD--FSEQRWYEEE
110 120 130 140 150 160
250 260
pF1KE3 APQGESSTQPRLKITDLD
::
CCDS27 EPQLRCGPVCYSPEGGVHYVAGTGGLGPA
170 180 190
>>CCDS44274.1 NME7 gene_id:29922|Hs108|chr1 (340 aa)
initn: 271 init1: 169 opt: 278 Z-score: 347.5 bits: 72.3 E(32554): 4.9e-13
Smith-Waterman score: 278; 31.2% identity (62.4% similar) in 173 aa overlap (64-236:24-188)
40 50 60 70 80 90
pF1KE3 VGLDLLHFALAEADRLDVLEKYRGKCEPTFLFYAIKDEALSDEDECVSHGKNNGEDEDMV
:: . : ...: . ...: . . .
CCDS44 MHDVKNHRTFLKRTKYDNLHLEDLFIGNKVNVFSRQLVLIDYGDQYTARQ--L
10 20 30 40 50
100 110 120 130 140 150
pF1KE3 SSERTCTLAIIKPDAVAHGKTDEIIMKIQEAGFEILTNEERTMTEAEVRLFYQHKAGEEA
.:.. :::.:::::.. :. ::: :..::: : . ... :. :. . ..
CCDS44 GSRKEKTLALIKPDAIS--KAGEIIEIINKAGFTITKLKMMMLSRKEALDFHVDHQSRPF
60 70 80 90 100
160 170 180 190 200 210
pF1KE3 FEKLVHHMCSGPSHLLILTRTEGFEDVVTTWRTVMGPRDPNVARREQPESLRAQYGTEMP
:..:.. . .:: . . : .:.. :. ..:: . .::: . ::.:: .::.
CCDS44 FNELIQFITTGPIIAMEILR----DDAICEWKRLLGPANSGVARTDASESIRALFGTDGI
110 120 130 140 150 160
220 230 240 250 260
pF1KE3 FNAVHGSRDREDADRELALLFPSLKFSDKDTEAPQGESSTQPRLKITDLD
::.:: . .: ::. :.:::
CCDS44 RNAAHGPDSFASAAREMELFFPSSGGCGPANTAKFTNCTCCIVKPHAVSEGLLGKILMAI
170 180 190 200 210 220
>>CCDS1277.1 NME7 gene_id:29922|Hs108|chr1 (376 aa)
initn: 271 init1: 169 opt: 278 Z-score: 346.8 bits: 72.3 E(32554): 5.4e-13
Smith-Waterman score: 278; 31.2% identity (62.4% similar) in 173 aa overlap (64-236:60-224)
40 50 60 70 80 90
pF1KE3 VGLDLLHFALAEADRLDVLEKYRGKCEPTFLFYAIKDEALSDEDECVSHGKNNGEDEDMV
:: . : ...: . ...: . . .
CCDS12 PGDGSVEMHDVKNHRTFLKRTKYDNLHLEDLFIGNKVNVFSRQLVLIDYGDQYTARQ--L
30 40 50 60 70 80
100 110 120 130 140 150
pF1KE3 SSERTCTLAIIKPDAVAHGKTDEIIMKIQEAGFEILTNEERTMTEAEVRLFYQHKAGEEA
.:.. :::.:::::.. :. ::: :..::: : . ... :. :. . ..
CCDS12 GSRKEKTLALIKPDAIS--KAGEIIEIINKAGFTITKLKMMMLSRKEALDFHVDHQSRPF
90 100 110 120 130 140
160 170 180 190 200 210
pF1KE3 FEKLVHHMCSGPSHLLILTRTEGFEDVVTTWRTVMGPRDPNVARREQPESLRAQYGTEMP
:..:.. . .:: . . : .:.. :. ..:: . .::: . ::.:: .::.
CCDS12 FNELIQFITTGPIIAMEILR----DDAICEWKRLLGPANSGVARTDASESIRALFGTDGI
150 160 170 180 190 200
220 230 240 250 260
pF1KE3 FNAVHGSRDREDADRELALLFPSLKFSDKDTEAPQGESSTQPRLKITDLD
::.:: . .: ::. :.:::
CCDS12 RNAAHGPDSFASAAREMELFFPSSGGCGPANTAKFTNCTCCIVKPHAVSEGLLGKILMAI
210 220 230 240 250 260
>>CCDS5452.1 NME8 gene_id:51314|Hs108|chr7 (588 aa)
initn: 648 init1: 167 opt: 279 Z-score: 345.1 bits: 72.7 E(32554): 6.7e-13
Smith-Waterman score: 404; 36.0% identity (61.2% similar) in 242 aa overlap (1-207:23-261)
10 20 30
pF1KE3 MLSSKGLTVVDVYQGWCGPCKPVVSLFQKMRIEVGLD-
::..:::::.::::.:::::. . ::.:.. :.. :
CCDS54 MASKKREVQLQTVINNQSLWDEMLQNKGLTVIDVYQAWCGPCRAMQPLFRKLKNELNEDE
10 20 30 40 50 60
40 50 60 70 80
pF1KE3 LLHFALAEADRLDVLEKYRGKCEPTFLFYA---------------IKDEALS--DEDECV
.::::.:::: . .:. .: ::::.::: . .. .... ::.. .
CCDS54 ILHFAVAEADNIVTLQPFRDKCEPVFLFSVNGKIIEKIQGANAPLVNKKVINLIDEERKI
70 80 90 100 110 120
90 100 110 120
pF1KE3 SHGKNNGE--------DEDM-VSSERTC-------TLAIIKPDAVAHGKTDEIIMKIQEA
. :. : : :: : : ..:::::::: :. :: :: .:
CCDS54 AAGEMARPQYPEIPLVDSDSEVSEESPCESVQELYSIAIIKPDAVISKKVLEIKRKITKA
130 140 150 160 170 180
130 140 150 160 170 180
pF1KE3 GFEILTNEERTMTEAEVRLFYQHKAGEEAFEKLVHHMCSGPSHLLILTRTEGFEDVVTTW
:: : .... ..:: .: ::.. : . ::..: : :: :..:... .: . .
CCDS54 GFIIEAEHKTVLTEEQVVNFYSRIADQCDFEEFVSFMTSGLSYILVVS--QGSKHNPPSE
190 200 210 220 230
190 200 210 220 230 240
pF1KE3 RTV-MGPRDPNVARREQPESLRAQYGTEMPFNAVHGSRDREDADRELALLFPSLKFSDKD
.: . .:: ..::: ..::
CCDS54 ETEPQTDTEPNERSEDQPE-VEAQVTPGMMKNKQDSLQEYLERQHLAQLCDIEEDAANVA
240 250 260 270 280 290
263 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 02:24:35 2016 done: Sun Nov 6 02:24:35 2016
Total Scan time: 2.330 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]