Result of FASTA (omim) for
pFN21AE3071
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3071, 229 aa
1>>>pF1KE3071 229 - 229 aa - 229 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9663+/-0.000408; mu= 15.9477+/- 0.026
mean_var=80.3928+/-16.152, 0's: 0 Z-trim(114.6): 456 B-trim: 543 in 1/50
Lambda= 0.143043
statistics sampled from 24024 (24576) to 24024 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.288), width: 16
Scan time: 6.250
The best scores are: opt bits E(85289)
NP_112586 (OMIM: 605950,615222) ras-related protei ( 229) 1556 330.6 1.4e-90
XP_011530601 (OMIM: 605950,615222) PREDICTED: ras- ( 277) 1556 330.6 1.6e-90
NP_004785 (OMIM: 300333) ras-related protein Rab-3 ( 237) 882 191.5 1.1e-48
XP_016885452 (OMIM: 300333) PREDICTED: ras-related ( 161) 577 128.4 7.1e-30
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 521 116.9 2.6e-26
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 514 115.5 6.9e-26
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 514 115.5 6.9e-26
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 514 115.5 6.9e-26
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 514 115.5 6.9e-26
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 506 113.8 2.2e-25
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 503 113.2 3.5e-25
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 500 112.6 5.2e-25
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 488 110.1 2.9e-24
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 481 108.7 8e-24
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 480 108.5 8.9e-24
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 478 108.0 1.2e-23
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 464 105.1 8.7e-23
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 458 103.9 2.2e-22
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 457 103.8 2.8e-22
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 453 102.9 4.4e-22
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 451 102.5 5.9e-22
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 441 100.4 2.5e-21
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 439 100.0 3e-21
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 439 100.1 3.6e-21
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 439 100.1 3.6e-21
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 438 99.8 3.8e-21
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 438 99.8 3.8e-21
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 438 99.8 3.8e-21
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 438 99.8 3.8e-21
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 434 98.9 6.3e-21
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 434 99.0 6.5e-21
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 434 99.0 6.8e-21
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 434 99.0 7e-21
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 429 98.0 1.4e-20
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 426 97.3 2.1e-20
XP_016873867 (OMIM: 612565) PREDICTED: ras-related ( 237) 414 94.9 1.3e-19
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 410 94.0 2.1e-19
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 410 94.0 2.1e-19
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 410 94.0 2.1e-19
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 410 94.0 2.1e-19
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 409 93.8 2.4e-19
XP_011519339 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 410 94.4 3.7e-19
XP_011519340 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 410 94.4 3.7e-19
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 405 93.0 4.3e-19
NP_001138430 (OMIM: 614178) EF-hand calcium-bindin ( 731) 410 94.5 5e-19
XP_011519336 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 410 94.5 5e-19
XP_006719084 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 410 94.5 5e-19
XP_011519338 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 410 94.5 5e-19
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 402 92.4 6.7e-19
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 402 92.4 6.8e-19
>>NP_112586 (OMIM: 605950,615222) ras-related protein Ra (229 aa)
initn: 1556 init1: 1556 opt: 1556 Z-score: 1747.2 bits: 330.6 E(85289): 1.4e-90
Smith-Waterman score: 1556; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEEMESSLEASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MAEEMESSLEASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 RTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 SFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 SFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAK
130 140 150 160 170 180
190 200 210 220
pF1KE3 NPNDNDHVEAIFMTLAHKLKSHKPLMLSQPPDNGIILKPEPKPAMTCWC
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 NPNDNDHVEAIFMTLAHKLKSHKPLMLSQPPDNGIILKPEPKPAMTCWC
190 200 210 220
>>XP_011530601 (OMIM: 605950,615222) PREDICTED: ras-rela (277 aa)
initn: 1556 init1: 1556 opt: 1556 Z-score: 1746.2 bits: 330.6 E(85289): 1.6e-90
Smith-Waterman score: 1556; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:49-277)
10 20 30
pF1KE3 MAEEMESSLEASFSSSGAVSGASGFLPPAR
::::::::::::::::::::::::::::::
XP_011 KRYVDAGTDPTPEPSAPSLPLLSSLGRVGGMAEEMESSLEASFSSSGAVSGASGFLPPAR
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE3 SRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTA
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE3 GQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKC
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE3 DLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQP
200 210 220 230 240 250
220
pF1KE3 PDNGIILKPEPKPAMTCWC
:::::::::::::::::::
XP_011 PDNGIILKPEPKPAMTCWC
260 270
>>NP_004785 (OMIM: 300333) ras-related protein Rab-33A [ (237 aa)
initn: 872 init1: 872 opt: 882 Z-score: 995.3 bits: 191.5 E(85289): 1.1e-48
Smith-Waterman score: 882; 64.5% identity (84.7% similar) in 203 aa overlap (32-229:35-237)
10 20 30 40 50 60
pF1KE3 AEEMESSLEASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDR
:::::::::::::::::::.:::.: :::.
NP_004 ILGHGSLQPASAAGLASLELDSSLDQYVQIRIFKIIVIGDSNVGKTCLTFRFCGGTFPDK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 TEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMAS
:::::::::::..:::.::.::.:.::::::::::::::.::::::::::::::.:.:.:
NP_004 TEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVTKMTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 FHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKN
: .: ::.::. : . .:..::::::::: ::::..:: ::::.:.: :::::::.
NP_004 FTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFETSAKD
130 140 150 160 170 180
190 200 210 220
pF1KE3 PNDNDHVEAIFMTLAHKLKSHKPLMLSQPP-DNGIILKPE-PKPA---MTCWC
:.....::.::: :: .::..: :. . ..: . : : :. : .: :
NP_004 PKESQNVESIFMCLACRLKAQKSLLYRDAERQQGKVQKLEFPQEANSKTSCPC
190 200 210 220 230
>>XP_016885452 (OMIM: 300333) PREDICTED: ras-related pro (161 aa)
initn: 554 init1: 554 opt: 577 Z-score: 657.3 bits: 128.4 E(85289): 7.1e-30
Smith-Waterman score: 577; 56.9% identity (79.7% similar) in 153 aa overlap (82-229:9-161)
60 70 80 90 100 110
pF1KE3 RFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVV
. .:.::::::::::::::.::::::::::
XP_016 MMPTQEALLAVQVWDTAGQERFRKSMVEHYYRNVHAVV
10 20 30
120 130 140 150 160 170
pF1KE3 FVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHS
::::.:.:.:: .: ::.::. : . .:..::::::::: ::::..:: ::::.:.
XP_016 FVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHN
40 50 60 70 80 90
180 190 200 210 220
pF1KE3 MPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQPP-DNGIILKPE-PKPA---MT
: :::::::.:.....::.::: :: .::..: :. . ..: . : : :. : .
XP_016 MLLFETSAKDPKESQNVESIFMCLACRLKAQKSLLYRDAERQQGKVQKLEFPQEANSKTS
100 110 120 130 140 150
pF1KE3 CWC
: :
XP_016 CPC
160
>>NP_004152 (OMIM: 179508) ras-related protein Rab-1A is (205 aa)
initn: 508 init1: 272 opt: 521 Z-score: 593.5 bits: 116.9 E(85289): 2.6e-26
Smith-Waterman score: 521; 44.0% identity (74.9% similar) in 175 aa overlap (26-200:4-173)
10 20 30 40 50 60
pF1KE3 MAEEMESSLEASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPD
. : . .::...::::.:::.:: :: . .
NP_004 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTE
10 20 30
70 80 90 100 110 120
pF1KE3 RTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMA
.::::::. :..:.::. ::.:.:::::::::: .... :::..:... :::.:..
NP_004 SYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFR-TITSSYYRGAHGIIVVYDVTDQE
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE3 SFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAK
::... .:..: .. : . ..:::::::: . : :..:::. ..:..:::::
NP_004 SFNNVKQWLQEIDRYASEN-VNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAK
100 110 120 130 140 150
190 200 210 220
pF1KE3 NPNDNDHVEAIFMTLAHKLKSHKPLMLSQPPDNGIILKPEPKPAMTCWC
: .. :: :::.: ..:
NP_004 NATN---VEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGCC
160 170 180 190 200
>>NP_001272988 (OMIM: 605693) ras-related protein Rab-30 (203 aa)
initn: 481 init1: 284 opt: 514 Z-score: 585.7 bits: 115.5 E(85289): 6.9e-26
Smith-Waterman score: 514; 47.9% identity (76.3% similar) in 169 aa overlap (33-201:9-172)
10 20 30 40 50 60
pF1KE3 EEMESSLEASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRT
.:::..::...::::::. :: : ::
NP_001 MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQ
10 20 30
70 80 90 100 110 120
pF1KE3 EATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASF
::::::: ..:::.::..:.:.:::::::::: :..: :::...:....::.: ::
NP_001 GATIGVDFMIKTVEINGEKVKLQIWDTAGQERFR-SITQSYYRSANALILTYDITCEESF
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE3 HSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNP
. :: :..: .:. .: . .::::: :: .: . :..:.....: .:::::
NP_001 RCLPEWLREIEQYA-SNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK--
100 110 120 130 140 150
190 200 210 220
pF1KE3 NDNDHVEAIFMTLAHKLKSHKPLMLSQPPDNGIILKPEPKPAMTCWC
..:.:: .:. :: .: :
NP_001 -ESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTCCNFN
160 170 180 190 200
>>NP_001272990 (OMIM: 605693) ras-related protein Rab-30 (203 aa)
initn: 481 init1: 284 opt: 514 Z-score: 585.7 bits: 115.5 E(85289): 6.9e-26
Smith-Waterman score: 514; 47.9% identity (76.3% similar) in 169 aa overlap (33-201:9-172)
10 20 30 40 50 60
pF1KE3 EEMESSLEASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRT
.:::..::...::::::. :: : ::
NP_001 MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQ
10 20 30
70 80 90 100 110 120
pF1KE3 EATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASF
::::::: ..:::.::..:.:.:::::::::: :..: :::...:....::.: ::
NP_001 GATIGVDFMIKTVEINGEKVKLQIWDTAGQERFR-SITQSYYRSANALILTYDITCEESF
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE3 HSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNP
. :: :..: .:. .: . .::::: :: .: . :..:.....: .:::::
NP_001 RCLPEWLREIEQYA-SNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK--
100 110 120 130 140 150
190 200 210 220
pF1KE3 NDNDHVEAIFMTLAHKLKSHKPLMLSQPPDNGIILKPEPKPAMTCWC
..:.:: .:. :: .: :
NP_001 -ESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTCCNFN
160 170 180 190 200
>>NP_055303 (OMIM: 605693) ras-related protein Rab-30 [H (203 aa)
initn: 481 init1: 284 opt: 514 Z-score: 585.7 bits: 115.5 E(85289): 6.9e-26
Smith-Waterman score: 514; 47.9% identity (76.3% similar) in 169 aa overlap (33-201:9-172)
10 20 30 40 50 60
pF1KE3 EEMESSLEASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRT
.:::..::...::::::. :: : ::
NP_055 MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQ
10 20 30
70 80 90 100 110 120
pF1KE3 EATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASF
::::::: ..:::.::..:.:.:::::::::: :..: :::...:....::.: ::
NP_055 GATIGVDFMIKTVEINGEKVKLQIWDTAGQERFR-SITQSYYRSANALILTYDITCEESF
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE3 HSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNP
. :: :..: .:. .: . .::::: :: .: . :..:.....: .:::::
NP_055 RCLPEWLREIEQYA-SNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK--
100 110 120 130 140 150
190 200 210 220
pF1KE3 NDNDHVEAIFMTLAHKLKSHKPLMLSQPPDNGIILKPEPKPAMTCWC
..:.:: .:. :: .: :
NP_055 -ESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTCCNFN
160 170 180 190 200
>>NP_001272989 (OMIM: 605693) ras-related protein Rab-30 (203 aa)
initn: 481 init1: 284 opt: 514 Z-score: 585.7 bits: 115.5 E(85289): 6.9e-26
Smith-Waterman score: 514; 47.9% identity (76.3% similar) in 169 aa overlap (33-201:9-172)
10 20 30 40 50 60
pF1KE3 EEMESSLEASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRT
.:::..::...::::::. :: : ::
NP_001 MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQ
10 20 30
70 80 90 100 110 120
pF1KE3 EATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASF
::::::: ..:::.::..:.:.:::::::::: :..: :::...:....::.: ::
NP_001 GATIGVDFMIKTVEINGEKVKLQIWDTAGQERFR-SITQSYYRSANALILTYDITCEESF
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE3 HSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNP
. :: :..: .:. .: . .::::: :: .: . :..:.....: .:::::
NP_001 RCLPEWLREIEQYA-SNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK--
100 110 120 130 140 150
190 200 210 220
pF1KE3 NDNDHVEAIFMTLAHKLKSHKPLMLSQPPDNGIILKPEPKPAMTCWC
..:.:: .:. :: .: :
NP_001 -ESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTCCNFN
160 170 180 190 200
>>NP_112243 (OMIM: 612565) ras-related protein Rab-1B [H (201 aa)
initn: 491 init1: 272 opt: 506 Z-score: 576.9 bits: 113.8 E(85289): 2.2e-25
Smith-Waterman score: 506; 40.3% identity (70.1% similar) in 201 aa overlap (26-224:1-196)
10 20 30 40 50 60
pF1KE3 MAEEMESSLEASFSSSGAVSGASGFLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPD
. : . .::...::::.:::.:: :: . .
NP_112 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTE
10 20 30
70 80 90 100 110 120
pF1KE3 RTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMA
.::::::. :..:.::. ::.:.:::::::::: .... :::..:... :::.:..
NP_112 SYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFR-TITSSYYRGAHGIIVVYDVTDQE
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE3 SFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAK
:. .. .:..: .. : . ..::::: :: . : . :..:::. ..:..:::::
NP_112 SYANVKQWLQEIDRYASEN-VNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAK
100 110 120 130 140 150
190 200 210 220
pF1KE3 NPNDNDHVEAIFMTLAHKLKSHK-PLMLSQPPDNGIILKPEP-KPAMTCWC
: .. :: :::.: ..:.. : : .. . : :::
NP_112 NATN---VEQAFMTMAAEIKKRMGPGAASGGERPNLKIDSTPVKPAGGGCC
160 170 180 190 200
229 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:20:06 2016 done: Sun Nov 6 05:20:07 2016
Total Scan time: 6.250 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]