Result of FASTA (ccds) for
pFN21AE2798
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2798, 590 aa
1>>>pF1KE2798 590 - 590 aa - 590 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0891+/-0.00162; mu= 16.5399+/- 0.097
mean_var=118.3770+/-24.613, 0's: 0 Z-trim(99.7): 108 B-trim: 293 in 2/48
Lambda= 0.117880
statistics sampled from 5810 (5913) to 5810 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.467), E-opt: 0.2 (0.177), width: 16
Scan time: 1.420
The best scores are: opt bits E(33420)
CCDS54253.1 SBSN gene_id:374897|Hs109|chr19 ( 590) 4032 698.0 8.7e-201
CCDS12464.1 SBSN gene_id:374897|Hs109|chr19 ( 247) 969 176.8 3e-44
CCDS30859.1 HRNR gene_id:388697|Hs109|chr1 (2850) 338 70.4 3.5e-11
>>CCDS54253.1 SBSN gene_id:374897|Hs109|chr19 (590 aa)
initn: 4032 init1: 4032 opt: 4032 Z-score: 3718.4 bits: 698.0 E(33420): 8.7e-201
Smith-Waterman score: 4032; 100.0% identity (100.0% similar) in 590 aa overlap (1-590:1-590)
10 20 30 40 50 60
pF1KE2 MHLARLVGSCSLLLLLGALSGWAASDDPIEKVIEGINRGLSNAEREVGKALDGINSGITH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MHLARLVGSCSLLLLLGALSGWAASDDPIEKVIEGINRGLSNAEREVGKALDGINSGITH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AGREVEKVFNGLSNMGSHTGKELDKGVQGLNHGMDKVAHEINHGIGQAGKEAEKLGHGVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 AGREVEKVFNGLSNMGSHTGKELDKGVQGLNHGMDKVAHEINHGIGQAGKEAEKLGHGVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 NAAGQVGKEADKLIHHGVHHGANQAGSEAGKFGQGVDNAAGQAGNEAGRFGQGVHHAAGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NAAGQVGKEADKLIHHGVHHGANQAGSEAGKFGQGVDNAAGQAGNEAGRFGQGVHHAAGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 AGNEAGRFGQGVHHAAGQAGNEAGRFGQGAHHGLSEGWKETEKFGQGIHHAAGQVGKEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 AGNEAGRFGQGVHHAAGQAGNEAGRFGQGAHHGLSEGWKETEKFGQGIHHAAGQVGKEAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 KFGQGAHHAAGQAGNEAGRFGQGVHHGLSEGWKETEKFGQGVHHTAGQVGKEAEKFGQGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KFGQGAHHAAGQAGNEAGRFGQGVHHGLSEGWKETEKFGQGVHHTAGQVGKEAEKFGQGA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 HHAAGQAGNEAGRFGQGAHHAAGQAGNEAGRFGQGVHHGLSEGWKETEKFGQGVHHAASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 HHAAGQAGNEAGRFGQGAHHAAGQAGNEAGRFGQGVHHGLSEGWKETEKFGQGVHHAASQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 FGKETEKLGHGVHHGVNEAWKEAEKFGQGVHHAASQVGKEEDRVVQGLHHGVSQAGREAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FGKETEKLGHGVHHGVNEAWKEAEKFGQGVHHAASQVGKEEDRVVQGLHHGVSQAGREAG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 QFGHDIHHTAGQAGKEGDIAVHGVQPGVHEAGKEAGQFGQGVHHTLEQAGKEADKAVQGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QFGHDIHHTAGQAGKEGDIAVHGVQPGVHEAGKEAGQFGQGVHHTLEQAGKEADKAVQGF
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 HTGVHQAGKEAEKLGQGVNHAADQAGKEVEKLGQGAHHAAGQAGKELQNAHNGVNQASKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 HTGVHQAGKEAEKLGQGVNHAADQAGKEVEKLGQGAHHAAGQAGKELQNAHNGVNQASKE
490 500 510 520 530 540
550 560 570 580 590
pF1KE2 ANQLLNGNHQSGSSSHQGGATTTPLASGASVNTPFINLPALWRSVANIMP
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ANQLLNGNHQSGSSSHQGGATTTPLASGASVNTPFINLPALWRSVANIMP
550 560 570 580 590
>>CCDS12464.1 SBSN gene_id:374897|Hs109|chr19 (247 aa)
initn: 886 init1: 886 opt: 969 Z-score: 908.1 bits: 176.8 E(33420): 3e-44
Smith-Waterman score: 1102; 75.7% identity (90.0% similar) in 230 aa overlap (1-227:1-225)
10 20 30 40 50 60
pF1KE2 MHLARLVGSCSLLLLLGALSGWAASDDPIEKVIEGINRGLSNAEREVGKALDGINSGITH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MHLARLVGSCSLLLLLGALSGWAASDDPIEKVIEGINRGLSNAEREVGKALDGINSGITH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AGREVEKVFNGLSNMGSHTGKELDKGVQGLNHGMDKVAHEINHGIGQAGKEAEKLGHGVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 AGREVEKVFNGLSNMGSHTGKELDKGVQGLNHGMDKVAHEINHGIGQAGKEAEKLGHGVN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 NAAGQVGKEADKLIHHGVHHGANQAGSEAGKFGQGVDNAAGQAGNEAGRFGQGVHHAAGQ
:::::.:::::: .. : : :..:::.:: :.::::..:: :::.:. ..:::.::::::
CCDS12 NAAGQAGKEADKAVQ-GFHTGVHQAGKEAEKLGQGVNHAADQAGKEVEKLGQGAHHAAGQ
130 140 150 160 170
190 200 210 220 230
pF1KE2 AGNEAGRFGQGVHHAAGQAGNEAGRFGQGAHHGLS---EGWKETEKFGQGIHHAAGQVGK
::.: :..:....::..::... .: :.. : .: : ...:
CCDS12 AGKEL----QNAHNGVNQASKEANQLLNGNHQSGSSSHQGGATTTPLASGASVNTPFINL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 EAEKFGQGAHHAAGQAGNEAGRFGQGVHHGLSEGWKETEKFGQGVHHTAGQVGKEAEKFG
CCDS12 PALWRSVANIMP
240
>>CCDS30859.1 HRNR gene_id:388697|Hs109|chr1 (2850 aa)
initn: 62 init1: 62 opt: 338 Z-score: 314.4 bits: 70.4 E(33420): 3.5e-11
Smith-Waterman score: 381; 23.3% identity (58.5% similar) in 532 aa overlap (70-558:724-1231)
40 50 60 70 80 90
pF1KE2 LSNAEREVGKALDGINSGITHAGREVEKVFNGLSNMGSHTGKELDKGVQGLNHGMDKVAH
.: . ::..:. . .: . :...
CCDS30 VSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYG
700 710 720 730 740 750
100 110 120 130 140 150
pF1KE2 EINHGIGQAGKEAEKLGHGVNNAAGQV--GKEADKLIHHGVHHGANQAGSEAGKFGQGVD
. . : :.. .... : : ... ..: :. . . :: : .... .: :.. .:
CCDS30 QHGSGSHQSSGHGRQ-GSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSSCGHYESGSG
760 770 780 790 800 810
160 170 180 190 200 210
pF1KE2 NAAGQAGNEAGRFGQGVHHAAGQAGNEAGRFG-QGVHHAAGQAGNEAGRFGQGAHHGLSE
.:.: . .:.: ::: .: :. .:.:. :: : :. .:. .....: :
CCDS30 QASGFGQHESGS-GQGY----SQHGSASGHFSSQGRH------GSTSGQSSSSGQHDSSS
820 830 840 850 860
220 230 240 250 260 270
pF1KE2 GWKETEKFGQ---GIHHAAGQVGKEAEKFGQGAHHAAGQAGNEAGRFGQGVHHGLSEGWK
: .. ..:: . :::.:. :... ::. : :: :. .:. . .:: . : .
CCDS30 G--QSSSYGQHESASHHASGR-GRHGSGSGQSPGH--GQRGSGSGQSPSYGRHGSGSGRS
870 880 890 900 910
280 290 300 310 320
pF1KE2 ETE-KFGQGVHHTAG-----QVGKEA--EKFGQGAHHAAG--QAGNEAGRFGQGAHHAAG
. . :.: ...: . :. . . :.:. :... : :...:. ... .:...
CCDS30 SSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSS
920 930 940 950 960 970
330 340 350 360 370
pF1KE2 QAGNEA-GRFGQGVHHGLSEGWKETEKFGQGVHHAASQFGKETEKLGHGVHHG---VNEA
.... . :. :.: ...:..: . . :.: . :. :.. :.. .: . .
CCDS30 SGSSSSYGQHGSGSRQSLGHGQHGS---GSGQSPSPSR-GRHGSGSGQSSSYGPYRSGSG
980 990 1000 1010 1020 1030
380 390 400 410 420 430
pF1KE2 WKEAE-KFGQGVHHAASQVGKEEDRVVQGLHHGVSQAGREAGQFG-HDIH-HTAGQA---
:. .. . .: :. : .:..:.: .: : .: : .:. . : : :.::.
CCDS30 WSSSRGPYESGSGHS-SGLGHRESR--SGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSC
1040 1050 1060 1070 1080
440 450 460 470 480
pF1KE2 GKEGDIAVHGVQPGVHEAG--------KEAGQFGQGVHHTLEQAGKEADKAV--QGFHTG
:..: . .. . : : .: .... ::. : . .:.. . . .: .:
CCDS30 GQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSG
1090 1100 1110 1120 1130 1140
490 500 510 520 530
pF1KE2 -VHQAGKEAEKLGQ--GVNHAADQAGKE--VEKLGQGAHHAAG--QAGKELQNAHNGVNQ
..:... ::. : .: ...:. . :.:. :..: : :.. .. : .
CCDS30 RSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERH
1150 1160 1170 1180 1190 1200
540 550 560 570 580 590
pF1KE2 ASKEANQLLNGNHQSGSSSHQGGATTTPLASGASVNTPFINLPALWRSVANIMP
.:. ... :.: ::: . .:
CCDS30 GSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSS
1210 1220 1230 1240 1250 1260
>--
initn: 99 init1: 44 opt: 366 Z-score: 340.2 bits: 75.2 E(33420): 1.3e-12
Smith-Waterman score: 386; 24.2% identity (56.8% similar) in 542 aa overlap (53-558:1331-1846)
30 40 50 60 70 80
pF1KE2 AASDDPIEKVIEGINRGLSNAEREVGKALDGINSGITHAGREVEKVFNGLSNMGSHTGKE
: .:. : : . .: . :. .:.
CCDS30 GSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQS-SGYGRHGAGSGQS
1310 1320 1330 1340 1350
90 100 110 120 130 140
pF1KE2 LDKGVQGLNHGMDKVAHEINHGIGQAGKEAEKLGHGVNNAAGQVGKEADKLIHHG-VHHG
..: .: . : .. . . : : ... . . : : ....: .:... : ..::
CCDS30 PSRGRHGSGSGHSSSYGQHGSGSGWSSSSG-RHGSGSGQSSGFGHHESSSWQSSGCTQHG
1360 1370 1380 1390 1400 1410
150 160 170 180 190
pF1KE2 AN--------QAGSEAGKFGQGVDNAAGQAGNEA-GRFGQGVHHAAGQAGNEAGRFGQGV
.. : ::..:. ..: ........ . :. :.: ... :.. . .: ::.
CCDS30 SGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGS-GQSP
1420 1430 1440 1450 1460 1470
200 210 220 230 240
pF1KE2 HHAAGQAGNEAGRFGQGAHHGLSEGWKETE-KFGQGIHHAAGQVGKEAEKFGQ----GAH
. :. :. .:. .. . .: . ::. .. . .: :..: .:.. . :: : :
CCDS30 SPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSG-LGHRESRSGQSSGYGQH
1480 1490 1500 1510 1520 1530
250 260 270 280 290
pF1KE2 -----HAA--GQAGNEAGRFGQGVHHGLSEGWKETE-KFGQGVHHTAGQVGKEAEKFGQG
:.. :: :. .:. .. .:: : : . .. . :.: ...: :... ::.
CCDS30 GSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGY-GRQGSGSGQS
1540 1550 1560 1570 1580 1590
300 310 320 330 340 350
pF1KE2 AHHAAGQAGNEA----GRFGQGAHHAA--GQAGNEAGRFGQGVHHGLSEGWKET-EKFGQ
:. .:.. :: :.:. ... :: :. :. . :: : : . . . :.
CCDS30 PGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGS
1600 1610 1620 1630 1640 1650
360 370 380 390 400 410
pF1KE2 GVHHAAS--QFGKETEKLGHGVHHGVNEAWKEAEKFGQGVHHAASQVGKEEDRVVQGLHH
: :... : :... . ..: .:: . . . ..:: : ..:. .. . : ::
CCDS30 GSGHSSGYGQHGSRSGQSSRGERHGSSS--RSSSRYGQ--HGSGSRQSSGHGR--QGSGS
1660 1670 1680 1690 1700
420 430 440 450 460
pF1KE2 GVSQA-GREAGQFGHDIHHTAGQAGK-EGDIAVHGVQPGVHEAGKEAGQFGQGVHHTLEQ
: : . ::... .::. : :: :. : . .: : ..:. .. ::: :..
CCDS30 GQSPSRGRHGSGLGHSSSH--GQHGSGSGRSSSRG--PYESRSGH-SSVFGQ--HES--G
1710 1720 1730 1740 1750 1760
470 480 490 500 510 520
pF1KE2 AGKEADKAVQGFHTGVHQAGKEAEKLGQGVNHAADQAGKEVEKLGQGAHHAAGQAGKELQ
.:. . . .: .: : .. . .: . . :: :. . ::.. : :: :. .
CCDS30 SGHSSAYSQHGSGSG-HFCSQGQHGSTSGQSSTFDQEGS---STGQSSSH--GQHGSGSS
1770 1780 1790 1800 1810
530 540 550 560 570 580
pF1KE2 NAHNGVNQASKEANQLLNGNHQSGS--SSHQGGATTTPLASGASVNTPFINLPALWRSVA
.. . .:.: ... : : ::: :: :
CCDS30 QSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHH
1820 1830 1840 1850 1860 1870
590
pF1KE2 NIMP
CCDS30 ESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSL
1880 1890 1900 1910 1920 1930
>--
initn: 44 init1: 44 opt: 352 Z-score: 327.3 bits: 72.8 E(33420): 6.7e-12
Smith-Waterman score: 392; 23.7% identity (57.9% similar) in 558 aa overlap (76-580:2293-2833)
50 60 70 80 90 100
pF1KE2 EVGKALDGINSGITHAGREVEKVFNGLSNMGSHTGKELDKGVQGLNHGMDKVAHEINHGI
:: .:. ..: .: . : .. . . :
CCDS30 FDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGS
2270 2280 2290 2300 2310 2320
110 120 130 140 150
pF1KE2 GQAGKEAEKLGHGVNNAAGQVGKEADKLIHHG-VHHGAN--------QAGSEAGKFGQGV
: ... ... : : ....: .:... : ..::.. : ::..:. ..:
CCDS30 GWSSSSGRH-GSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGE
2330 2340 2350 2360 2370 2380
160 170 180 190 200 210
pF1KE2 DNAAGQAGNEA-GRFGQGVHHAAGQAGNEAGRFGQGVHHAAGQAGNEAGRFGQGAHHGLS
........ . :. :.: ... :.. . .: ::. . :. :. .:. .. . .: .
CCDS30 RHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGS-GQSPSPSRGRHGSGSGQSSSYSPYGSG
2390 2400 2410 2420 2430 2440
220 230 240 250 260
pF1KE2 EGWKETE-KFGQGIHHAAGQVGKEAEKFGQ----GAH-----HAA--GQAGNEAGRFGQG
::. .. . .: :..: .:.. . :: : : :.. :: :. .:. ..
CCDS30 SGWSSSRGPYESGSGHSSG-LGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSC
2450 2460 2470 2480 2490
270 280 290 300 310
pF1KE2 VHHGLSEGWKETE-KFGQGVHHTAGQVGKEAEKFGQGAHHAAGQAGNEA----GRFGQGA
.:: : : . .. . :.: ...: :... ::. :. .:.. :: :.:.
CCDS30 GQHGASSGQSSSHGQHGSGSSQSSGY-GRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGS
2500 2510 2520 2530 2540 2550
320 330 340 350 360 370
pF1KE2 HHAA--GQAGNEAGRFGQGVHHGLSEGWKET-EKFGQGVHHAAS--QFGKETEKLGHGVH
... :: :. :. . :: : : . . . :.: :... : :... . ..: .
CCDS30 GRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGER
2560 2570 2580 2590 2600 2610
380 390 400 410 420
pF1KE2 HGVNEAWKEAEKFGQGVHHAASQVGKEEDRVVQGLHHGVSQA-GREAGQFGHDIHHT---
:: . . . ..:: : ..:. .. . : :: : : . ::... .::. :
CCDS30 HGSSSG--SSSHYGQ--HGSGSRQSSGHGR--QGSGSGQSPSRGRHGSGLGHSSSHGQHG
2620 2630 2640 2650 2660 2670
430 440 450 460 470
pF1KE2 --AGQAGKEGDIAV---HGVQPGVHEAGK----EAGQFGQGVHHTLEQ------AGKEAD
.:.....: :. : ::.:. .: :.: : : .:. .
CCDS30 SGSGRSSSRGPYESRLGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSST
2680 2690 2700 2710 2720 2730
480 490 500 510 520 530
pF1KE2 KAVQGFHTGVHQA-GKEAEKLGQGVNHAADQAGKEVEKLGQGAHHA-AGQAGKELQNAHN
.: :: .. :... .:. ... ::. ..:..: : . .::... :.. .
CCDS30 FDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSG-QSLSHGRHGSGSGQSSSYGQHG-S
2740 2750 2760 2770 2780 2790
540 550 560 570 580 590
pF1KE2 GVNQASKEANQLLNGNHQSGSSSHQGGATTTPLASGASVNTPFINLPALWRSVANIMP
: .:.: . : .:. :.: : .::.. .:.: .. :...:.
CCDS30 GSGQSSGYS-QHGSGSGQDGYSYCKGGSNH----DGGSSGSYFLSFPSSTSPYEYVQEQR
2800 2810 2820 2830 2840
CCDS30 CYFYQ
2850
>--
initn: 62 init1: 62 opt: 343 Z-score: 319.0 bits: 71.3 E(33420): 1.9e-11
Smith-Waterman score: 374; 23.6% identity (59.5% similar) in 556 aa overlap (35-561:209-721)
10 20 30 40 50 60
pF1KE2 RLVGSCSLLLLLGALSGWAASDDPIEKVIEGINRGLSNAEREVGKALDGINSGIT-HAGR
: . : :... :.. .: .::.. : .
CCDS30 YGEQNSDSHQSSGRGQCGSGSGQSPNYGQHGSGSGQSSSNDTHGSG-SGQSSGFSQHKSS
180 190 200 210 220 230
70 80 90 100 110
pF1KE2 EVEKVFNGLSNMGSHTGKELDKGVQGLNHGMDKVA--HEINHG----IGQAGKEAEK-LG
.. .: :. :: .:. : .: :... . :. . : :: :. ... ::
CCDS30 SGQS--SGYSQHGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLG
240 250 260 270 280 290
120 130 140 150 160 170
pF1KE2 HGVNNAAGQVGKEADKLIHHGVHHGANQAGSEAGKFGQGVDNAAGQAGNEAGR-----FG
:: . :. .... . ..:: :.....:. :. :.: . . ... :.: ::
CCDS30 HGRQ---GSGSRQSPSHVRHG--SGSGHSSSH-GQHGSGSSYSYSRGHYESGSGQTSGFG
300 310 320 330 340
180 190 200 210 220
pF1KE2 QGVHHAAGQAGNEAG--RFGQGVHHAA--GQAGNEAGRFGQGAHHGLSEGWKETEKFGQ-
: : .: .:. .: . :.: :.. :: :. .:. .....:: : ... ..::
CCDS30 Q---HESG-SGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHGSSS--RQSSSYGQH
350 360 370 380 390 400
230 240 250 260 270 280
pF1KE2 --GIHHAAGQVGKEAEKFGQGAHHAAGQAGNEAGRFGQGVHHGLSEGWKETEKFGQGVHH
. .:..:. :... ::. : :: :. .:. .. .:: :. .. . : :
CCDS30 ESASRHSSGR-GQHSSGSGQSPGH--GQRGSGSGQSPSSGQHGT--GFGRSSSSGPYVSG
410 420 430 440 450
290 300 310 320 330 340
pF1KE2 TAGQVGKEAEKFGQGAHHAAGQAGNEAGRFGQGAHHAAG--QAGNEAGRFGQGVHHGLSE
.. . : ::. :..... .. . :.:. :..: : :...:. ..: ..: :
CCDS30 SGYSSG-----FGH--HESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSA
460 470 480 490 500 510
350 360 370 380 390 400
pF1KE2 GWKETEKFGQGVHHAASQFGKETEKLGHGVHHGVNEAWKEAEKFGQGVHHAASQVGKEED
: . ..:: : ..:. ..:::. .:: . . . . . :. :...:. ..
CCDS30 G--SSSSYGQ--HGSGSR-----QSLGHS-RHGSGSGQSPSPSRGR--HESGSRQSSSYG
520 530 540 550
410 420 430 440 450 460
pF1KE2 RVVQGLHHGVSQAGREAGQFGHD--IHHTAGQAGKEGDIAVHGVQPGVHEAGKEAGQFGQ
: .. :.. :.:. ::. . : ...:. . . :: . : : . . :: :.
CCDS30 PHGYGSGRSSSRGPYESGS-GHSSGLGHQESRSGQSSGYGQHGSSSG-HSSTH--GQHGS
560 570 580 590 600 610
470 480 490 500 510
pF1KE2 --GVHHTLEQAGKEADKAV-QGFH-TGVHQAGKEAEK-LGQGVNHAADQAGKEVEKLGQG
: . : : . .. .: : .: :... ... :.: . . . :.. . ..
CCDS30 TSGQSSSCGQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSY
620 630 640 650 660 670
520 530 540 550 560 570
pF1KE2 AHHAAGQAGKELQNAHNGVNQASKEANQLLNGNHQSGSSSHQGGATTTPLASGASVNTPF
..:..:.. . .. :..:. :. .. .....:: :.: .:..
CCDS30 GQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQ
680 690 700 710 720 730
580 590
pF1KE2 INLPALWRSVANIMP
CCDS30 SSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHG
740 750 760 770 780 790
590 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Aug 16 14:36:48 2021 done: Mon Aug 16 14:36:48 2021
Total Scan time: 1.420 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]