Result of FASTA (omim) for
pFN21AE2737
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2737, 281 aa
1>>>pF1KE2737 281 - 281 aa - 281 aa
Library: /omim/omim.rfq.tfa
65279912 residues in 92274 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6961+/-0.00039; mu= 18.6057+/- 0.024
mean_var=64.8153+/-12.891, 0's: 0 Z-trim(111.9): 102 B-trim: 0 in 0/51
Lambda= 0.159307
statistics sampled from 21392 (21496) to 21392 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.597), E-opt: 0.2 (0.233), width: 16
Scan time: 3.210
The best scores are: opt bits E(92274)
NP_001765 (OMIM: 151523) leukocyte antigen CD37 is ( 281) 1896 444.6 1.1e-124
XP_005259492 (OMIM: 151523) leukocyte antigen CD37 ( 365) 1752 411.6 1.2e-114
NP_001035120 (OMIM: 151523) leukocyte antigen CD37 ( 213) 1449 341.8 7.2e-94
XP_011525846 (OMIM: 151523) leukocyte antigen CD37 ( 213) 1449 341.8 7.2e-94
XP_016883002 (OMIM: 151523) leukocyte antigen CD37 ( 213) 1449 341.8 7.2e-94
XP_011525844 (OMIM: 151523) leukocyte antigen CD37 ( 297) 1305 308.8 8.5e-84
XP_011525845 (OMIM: 151523) leukocyte antigen CD37 ( 297) 1305 308.8 8.5e-84
XP_005259493 (OMIM: 151523) leukocyte antigen CD37 ( 297) 1305 308.8 8.5e-84
XP_006718286 (OMIM: 176807,600623) CD82 antigen is ( 267) 503 124.4 2.4e-28
NP_002222 (OMIM: 176807,600623) CD82 antigen isofo ( 267) 503 124.4 2.4e-28
NP_001020405 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20
NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [ ( 238) 378 95.7 9.9e-20
XP_005253159 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20
NP_001020408 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20
NP_001020406 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20
NP_001020409 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20
NP_001020407 (OMIM: 602644) tetraspanin-4 isoform ( 238) 378 95.7 9.9e-20
NP_001035122 (OMIM: 151525) leukocyte surface anti ( 219) 334 85.5 1e-16
NP_000551 (OMIM: 151525) leukocyte surface antigen ( 219) 334 85.5 1e-16
XP_024304548 (OMIM: 179620,602243,609057) CD151 an ( 253) 329 84.4 2.5e-16
NP_004348 (OMIM: 179620,602243,609057) CD151 antig ( 253) 329 84.4 2.5e-16
NP_620599 (OMIM: 179620,602243,609057) CD151 antig ( 253) 329 84.4 2.5e-16
NP_001034579 (OMIM: 179620,602243,609057) CD151 an ( 253) 329 84.4 2.5e-16
NP_620598 (OMIM: 179620,602243,609057) CD151 antig ( 253) 329 84.4 2.5e-16
XP_011518369 (OMIM: 176807,600623) CD82 antigen is ( 236) 319 82.1 1.2e-15
NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapie ( 239) 313 80.7 3.1e-15
NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sa ( 239) 313 80.7 3.1e-15
XP_011518638 (OMIM: 602644) tetraspanin-4 isoform ( 269) 304 78.7 1.4e-14
NP_001020015 (OMIM: 176807,600623) CD82 antigen is ( 242) 298 77.3 3.4e-14
NP_005718 (OMIM: 613170) tetraspanin-1 [Homo sapie ( 241) 286 74.5 2.3e-13
XP_011538762 (OMIM: 613170) tetraspanin-1 isoform ( 258) 286 74.5 2.4e-13
NP_005715 (OMIM: 613134) tetraspanin-3 isoform 1 [ ( 253) 285 74.3 2.8e-13
NP_004347 (OMIM: 186845,613496) CD81 antigen isofo ( 236) 275 72.0 1.3e-12
NP_004607 (OMIM: 600769) tetraspanin-8 [Homo sapie ( 237) 273 71.5 1.8e-12
XP_016875402 (OMIM: 600769) tetraspanin-8 isoform ( 237) 273 71.5 1.8e-12
XP_006719646 (OMIM: 600769) tetraspanin-8 isoform ( 237) 273 71.5 1.8e-12
XP_024306825 (OMIM: 151525) leukocyte surface anti ( 218) 270 70.8 2.7e-12
NP_001760 (OMIM: 143030) CD9 antigen isoform 1 [Ho ( 228) 266 69.9 5.4e-12
XP_016877346 (OMIM: 613134) tetraspanin-3 isoform ( 214) 257 67.8 2.1e-11
NP_001307567 (OMIM: 151525) leukocyte surface anti ( 160) 249 65.9 6.2e-11
NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapie ( 268) 251 66.5 6.6e-11
XP_011518642 (OMIM: 602644) tetraspanin-4 isoform ( 174) 247 65.4 9e-11
NP_001020410 (OMIM: 602644) tetraspanin-4 isoform ( 174) 247 65.4 9e-11
XP_011518639 (OMIM: 602644) tetraspanin-4 isoform ( 174) 247 65.4 9e-11
XP_011518640 (OMIM: 602644) tetraspanin-4 isoform ( 174) 247 65.4 9e-11
XP_011518643 (OMIM: 602644) tetraspanin-4 isoform ( 174) 247 65.4 9e-11
XP_005253871 (OMIM: 143030) CD9 antigen isoform X1 ( 249) 233 62.3 1.1e-09
NP_001295245 (OMIM: 613133) tetraspanin-2 isoform ( 193) 228 61.1 2e-09
NP_005716 (OMIM: 613133) tetraspanin-2 isoform 1 [ ( 221) 228 61.2 2.2e-09
XP_006716023 (OMIM: 610120) tetraspanin-33 isoform ( 282) 225 60.6 4.3e-09
>>NP_001765 (OMIM: 151523) leukocyte antigen CD37 isofor (281 aa)
initn: 1896 init1: 1896 opt: 1896 Z-score: 2360.4 bits: 444.6 E(92274): 1.1e-124
Smith-Waterman score: 1896; 100.0% identity (100.0% similar) in 281 aa overlap (1-281:1-281)
10 20 30 40 50 60
pF1KE2 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN
190 200 210 220 230 240
250 260 270 280
pF1KE2 NLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLARYR
:::::::::::::::::::::::::::::::::::::::::
NP_001 NLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLARYR
250 260 270 280
>>XP_005259492 (OMIM: 151523) leukocyte antigen CD37 iso (365 aa)
initn: 1752 init1: 1752 opt: 1752 Z-score: 2180.0 bits: 411.6 E(92274): 1.2e-114
Smith-Waterman score: 1752; 97.4% identity (98.5% similar) in 268 aa overlap (1-268:1-268)
10 20 30 40 50 60
pF1KE2 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN
190 200 210 220 230 240
250 260 270 280
pF1KE2 NLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLARYR
::::::::::::::::. :.::. : :
XP_005 NLISIVGICLGVGLLEMTVMVLSVQLQRRALRRKCEPHVPGAGDSSPGPSLIADGGGGHS
250 260 270 280 290 300
>>NP_001035120 (OMIM: 151523) leukocyte antigen CD37 iso (213 aa)
initn: 1449 init1: 1449 opt: 1449 Z-score: 1806.8 bits: 341.8 E(92274): 7.2e-94
Smith-Waterman score: 1449; 100.0% identity (100.0% similar) in 213 aa overlap (69-281:1-213)
40 50 60 70 80 90
pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF
::::::::::::::::::::::::::::::
NP_001 MGIALLGCVGALKELRCLLGLYFGMLLLLF
10 20 30
100 110 120 130 140 150
pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA
160 170 180 190 200 210
280
pF1KE2 RYR
:::
NP_001 RYR
>>XP_011525846 (OMIM: 151523) leukocyte antigen CD37 iso (213 aa)
initn: 1449 init1: 1449 opt: 1449 Z-score: 1806.8 bits: 341.8 E(92274): 7.2e-94
Smith-Waterman score: 1449; 100.0% identity (100.0% similar) in 213 aa overlap (69-281:1-213)
40 50 60 70 80 90
pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF
::::::::::::::::::::::::::::::
XP_011 MGIALLGCVGALKELRCLLGLYFGMLLLLF
10 20 30
100 110 120 130 140 150
pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA
160 170 180 190 200 210
280
pF1KE2 RYR
:::
XP_011 RYR
>>XP_016883002 (OMIM: 151523) leukocyte antigen CD37 iso (213 aa)
initn: 1449 init1: 1449 opt: 1449 Z-score: 1806.8 bits: 341.8 E(92274): 7.2e-94
Smith-Waterman score: 1449; 100.0% identity (100.0% similar) in 213 aa overlap (69-281:1-213)
40 50 60 70 80 90
pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF
::::::::::::::::::::::::::::::
XP_016 MGIALLGCVGALKELRCLLGLYFGMLLLLF
10 20 30
100 110 120 130 140 150
pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA
160 170 180 190 200 210
280
pF1KE2 RYR
:::
XP_016 RYR
>>XP_011525844 (OMIM: 151523) leukocyte antigen CD37 iso (297 aa)
initn: 1305 init1: 1305 opt: 1305 Z-score: 1626.0 bits: 308.8 E(92274): 8.5e-84
Smith-Waterman score: 1305; 96.5% identity (98.0% similar) in 200 aa overlap (69-268:1-200)
40 50 60 70 80 90
pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF
::::::::::::::::::::::::::::::
XP_011 MGIALLGCVGALKELRCLLGLYFGMLLLLF
10 20 30
100 110 120 130 140 150
pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA
::::::::::::::::::::::::::::::::::::::. :.::. : :
XP_011 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLEMTVMVLSVQLQRRALRRKCEPH
160 170 180 190 200 210
280
pF1KE2 RYR
XP_011 VPGAGDSSPGPSLIADGGGGHSGSLWGGWGMAGACPNWGDKAPQGKLPMALGLWPLWVQD
220 230 240 250 260 270
>>XP_011525845 (OMIM: 151523) leukocyte antigen CD37 iso (297 aa)
initn: 1305 init1: 1305 opt: 1305 Z-score: 1626.0 bits: 308.8 E(92274): 8.5e-84
Smith-Waterman score: 1305; 96.5% identity (98.0% similar) in 200 aa overlap (69-268:1-200)
40 50 60 70 80 90
pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF
::::::::::::::::::::::::::::::
XP_011 MGIALLGCVGALKELRCLLGLYFGMLLLLF
10 20 30
100 110 120 130 140 150
pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA
::::::::::::::::::::::::::::::::::::::. :.::. : :
XP_011 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLEMTVMVLSVQLQRRALRRKCEPH
160 170 180 190 200 210
280
pF1KE2 RYR
XP_011 VPGAGDSSPGPSLIADGGGGHSGSLWGGWGMAGACPNWGDKAPQGKLPMALGLWPLWVQD
220 230 240 250 260 270
>>XP_005259493 (OMIM: 151523) leukocyte antigen CD37 iso (297 aa)
initn: 1305 init1: 1305 opt: 1305 Z-score: 1626.0 bits: 308.8 E(92274): 8.5e-84
Smith-Waterman score: 1305; 96.5% identity (98.0% similar) in 200 aa overlap (69-268:1-200)
40 50 60 70 80 90
pF1KE2 DKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLF
::::::::::::::::::::::::::::::
XP_005 MGIALLGCVGALKELRCLLGLYFGMLLLLF
10 20 30
100 110 120 130 140 150
pF1KE2 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ATQITLGILISTQRAQLERSLRDVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYP
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE2 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QDWFQVLILRGNGSEAHRVPCSCYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE2 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLELGFMTLSIFLCRNLDHVYNRLA
::::::::::::::::::::::::::::::::::::::. :.::. : :
XP_005 VPAESHIYREGCAQGLQKWLHNNLISIVGICLGVGLLEMTVMVLSVQLQRRALRRKCEPH
160 170 180 190 200 210
280
pF1KE2 RYR
XP_005 VPGAGDSSPGPSLIADGGGGHSGSLWGGWGMAGACPNWGDKAPQGKLPMALGLWPLWVQD
220 230 240 250 260 270
>>XP_006718286 (OMIM: 176807,600623) CD82 antigen isofor (267 aa)
initn: 640 init1: 341 opt: 503 Z-score: 630.4 bits: 124.4 E(92274): 2.4e-28
Smith-Waterman score: 630; 36.6% identity (68.5% similar) in 276 aa overlap (6-280:4-267)
10 20 30 40 50 60
pF1KE2 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV
.:... :::::.:::.::.::..:. ::.::: ::.::.: . . :.. . :
XP_006 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYV
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR
. : :: ...:::.::..:.::::::::..:::.. .:.: : :. . ..:.. .
XP_006 FIGVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS
.: . :. :... :.. ...::::: :..:::: .: . : : :. :::
XP_006 GIVTELIRDYNSSREDSL-QDAWDYVQAQVKCCGWVSFYNWTDNAELM-NRPEV-TYPCS
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN
: .... .:... : : . .. : . .:.::: . .: ::..
XP_006 C-EVKGEEDNSLS--------VRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQE
180 190 200 210 220
250 260 270 280
pF1KE2 NLISIVGICLGVGLLELGFMTLSIFLCRNL-DHVYNRLARYR
:: :.:. .::...:: :.::: :::.. .. :... .:
XP_006 NLGIILGVGVGVAIIELLGMVLSICLCRHVHSEDYSKVPKY
230 240 250 260
>>NP_002222 (OMIM: 176807,600623) CD82 antigen isoform 1 (267 aa)
initn: 640 init1: 341 opt: 503 Z-score: 630.4 bits: 124.4 E(92274): 2.4e-28
Smith-Waterman score: 630; 36.6% identity (68.5% similar) in 276 aa overlap (6-280:4-267)
10 20 30 40 50 60
pF1KE2 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV
.:... :::::.:::.::.::..:. ::.::: ::.::.: . . :.. . :
NP_002 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYV
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR
. : :: ...:::.::..:.::::::::..:::.. .:.: : :. . ..:.. .
NP_002 FIGVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS
.: . :. :... :.. ...::::: :..:::: .: . : : :. :::
NP_002 GIVTELIRDYNSSREDSL-QDAWDYVQAQVKCCGWVSFYNWTDNAELM-NRPEV-TYPCS
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN
: .... .:... : : . .. : . .:.::: . .: ::..
NP_002 C-EVKGEEDNSLS--------VRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQE
180 190 200 210 220
250 260 270 280
pF1KE2 NLISIVGICLGVGLLELGFMTLSIFLCRNL-DHVYNRLARYR
:: :.:. .::...:: :.::: :::.. .. :... .:
NP_002 NLGIILGVGVGVAIIELLGMVLSICLCRHVHSEDYSKVPKY
230 240 250 260
281 residues in 1 query sequences
65279912 residues in 92274 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Dec 20 16:33:02 2018 done: Thu Dec 20 16:33:03 2018
Total Scan time: 3.210 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]