Result of FASTA (omim) for
pFN21AE2736
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2736, 237 aa
1>>>pF1KE2736 237 - 237 aa - 237 aa
Library: /omim/omim.rfq.tfa
65279912 residues in 92274 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8022+/-0.000376; mu= 17.1812+/- 0.023
mean_var=62.6860+/-13.289, 0's: 0 Z-trim(110.9): 98 B-trim: 748 in 1/54
Lambda= 0.161990
statistics sampled from 19988 (20117) to 19988 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.561), E-opt: 0.2 (0.218), width: 16
Scan time: 2.800
The best scores are: opt bits E(92274)
NP_004607 (OMIM: 600769) tetraspanin-8 [Homo sapie ( 237) 1549 370.7 1.4e-102
XP_006719646 (OMIM: 600769) tetraspanin-8 isoform ( 237) 1549 370.7 1.4e-102
XP_016875402 (OMIM: 600769) tetraspanin-8 isoform ( 237) 1549 370.7 1.4e-102
NP_001020407 (OMIM: 602644) tetraspanin-4 isoform ( 238) 505 126.7 3.8e-29
NP_001020405 (OMIM: 602644) tetraspanin-4 isoform ( 238) 505 126.7 3.8e-29
NP_001020406 (OMIM: 602644) tetraspanin-4 isoform ( 238) 505 126.7 3.8e-29
XP_005253159 (OMIM: 602644) tetraspanin-4 isoform ( 238) 505 126.7 3.8e-29
NP_001020409 (OMIM: 602644) tetraspanin-4 isoform ( 238) 505 126.7 3.8e-29
NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [ ( 238) 505 126.7 3.8e-29
NP_001020408 (OMIM: 602644) tetraspanin-4 isoform ( 238) 505 126.7 3.8e-29
NP_006666 (OMIM: 613137) tetraspanin-9 [Homo sapie ( 239) 475 119.7 5e-27
NP_001161792 (OMIM: 613137) tetraspanin-9 [Homo sa ( 239) 475 119.7 5e-27
XP_011518638 (OMIM: 602644) tetraspanin-4 isoform ( 269) 432 109.7 5.8e-24
NP_001760 (OMIM: 143030) CD9 antigen isoform 1 [Ho ( 228) 414 105.4 9.3e-23
NP_001254627 (OMIM: 155740) CD63 antigen isoform A ( 238) 399 101.9 1.1e-21
NP_001771 (OMIM: 155740) CD63 antigen isoform A [H ( 238) 399 101.9 1.1e-21
XP_024305051 (OMIM: 155740) CD63 antigen isoform X ( 238) 399 101.9 1.1e-21
NP_001244318 (OMIM: 155740) CD63 antigen isoform A ( 238) 399 101.9 1.1e-21
NP_001244320 (OMIM: 155740) CD63 antigen isoform A ( 238) 399 101.9 1.1e-21
NP_001244319 (OMIM: 155740) CD63 antigen isoform A ( 238) 399 101.9 1.1e-21
XP_005253871 (OMIM: 143030) CD9 antigen isoform X1 ( 249) 384 98.4 1.3e-20
NP_005718 (OMIM: 613170) tetraspanin-1 [Homo sapie ( 241) 377 96.8 3.9e-20
NP_004347 (OMIM: 186845,613496) CD81 antigen isofo ( 236) 372 95.6 8.6e-20
XP_011518642 (OMIM: 602644) tetraspanin-4 isoform ( 174) 368 94.6 1.3e-19
XP_011518643 (OMIM: 602644) tetraspanin-4 isoform ( 174) 368 94.6 1.3e-19
XP_011518640 (OMIM: 602644) tetraspanin-4 isoform ( 174) 368 94.6 1.3e-19
XP_011518639 (OMIM: 602644) tetraspanin-4 isoform ( 174) 368 94.6 1.3e-19
NP_001020410 (OMIM: 602644) tetraspanin-4 isoform ( 174) 368 94.6 1.3e-19
NP_001244321 (OMIM: 155740) CD63 antigen isoform C ( 215) 358 92.3 7.8e-19
NP_620598 (OMIM: 179620,602243,609057) CD151 antig ( 253) 358 92.3 8.8e-19
NP_001034579 (OMIM: 179620,602243,609057) CD151 an ( 253) 358 92.3 8.8e-19
NP_004348 (OMIM: 179620,602243,609057) CD151 antig ( 253) 358 92.3 8.8e-19
NP_620599 (OMIM: 179620,602243,609057) CD151 antig ( 253) 358 92.3 8.8e-19
XP_024304548 (OMIM: 179620,602243,609057) CD151 an ( 253) 358 92.3 8.8e-19
NP_005715 (OMIM: 613134) tetraspanin-3 isoform 1 [ ( 253) 350 90.5 3.2e-18
NP_001035122 (OMIM: 151525) leukocyte surface anti ( 219) 346 89.5 5.5e-18
NP_000551 (OMIM: 151525) leukocyte surface antigen ( 219) 346 89.5 5.5e-18
NP_003261 (OMIM: 300191) tetraspanin-6 isoform a [ ( 245) 344 89.1 8.3e-18
NP_002222 (OMIM: 176807,600623) CD82 antigen isofo ( 267) 339 87.9 2e-17
XP_006718286 (OMIM: 176807,600623) CD82 antigen is ( 267) 339 87.9 2e-17
NP_001295245 (OMIM: 613133) tetraspanin-2 isoform ( 193) 336 87.1 2.5e-17
NP_005716 (OMIM: 613133) tetraspanin-2 isoform 1 [ ( 221) 336 87.2 2.8e-17
XP_011538762 (OMIM: 613170) tetraspanin-1 isoform ( 258) 333 86.5 5.1e-17
NP_001020015 (OMIM: 176807,600623) CD82 antigen is ( 242) 329 85.6 9.3e-17
NP_004606 (OMIM: 300096,300210) tetraspanin-7 [Hom ( 249) 311 81.4 1.8e-15
XP_011519214 (OMIM: 613137) tetraspanin-9 isoform ( 175) 302 79.1 5.8e-15
XP_011519215 (OMIM: 613137) tetraspanin-9 isoform ( 175) 302 79.1 5.8e-15
NP_848657 (OMIM: 610120) tetraspanin-33 [Homo sapi ( 283) 299 78.6 1.4e-14
NP_005714 (OMIM: 613136) tetraspanin-5 [Homo sapie ( 268) 295 77.6 2.5e-14
XP_006716023 (OMIM: 610120) tetraspanin-33 isoform ( 282) 295 77.7 2.6e-14
>>NP_004607 (OMIM: 600769) tetraspanin-8 [Homo sapiens] (237 aa)
initn: 1549 init1: 1549 opt: 1549 Z-score: 1963.4 bits: 370.7 E(92274): 1.4e-102
Smith-Waterman score: 1549; 98.7% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MAGVSACIKYSMFTFNFLFWLCGILILALAIWVRISNDSQAIFGSEDVGSSSYVAVDILI
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
NP_004 MAGVSACIKYSMFTFNFLFWLCGILILALAIWVRVSNDSQAIFGSEDVGSSSYVAVDILI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AVGAIIMILGFLACCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIVNET
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
NP_004 AVGAIIMILGFLGCCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIVNET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELCACLDKQRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELCACLDKQRP
130 140 150 160 170 180
190 200 210 220 230
pF1KE2 CQSYNGKQVYKETCISFIKDFLAKNLIIVIGIAFGLAVIEILGLVFSMVLYCQIGNK
::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
NP_004 CQSYNGKQVYKETCISFIKDFLAKNLIIVIGISFGLAVIEILGLVFSMVLYCQIGNK
190 200 210 220 230
>>XP_006719646 (OMIM: 600769) tetraspanin-8 isoform X1 [ (237 aa)
initn: 1549 init1: 1549 opt: 1549 Z-score: 1963.4 bits: 370.7 E(92274): 1.4e-102
Smith-Waterman score: 1549; 98.7% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MAGVSACIKYSMFTFNFLFWLCGILILALAIWVRISNDSQAIFGSEDVGSSSYVAVDILI
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_006 MAGVSACIKYSMFTFNFLFWLCGILILALAIWVRVSNDSQAIFGSEDVGSSSYVAVDILI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AVGAIIMILGFLACCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIVNET
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AVGAIIMILGFLGCCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIVNET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELCACLDKQRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELCACLDKQRP
130 140 150 160 170 180
190 200 210 220 230
pF1KE2 CQSYNGKQVYKETCISFIKDFLAKNLIIVIGIAFGLAVIEILGLVFSMVLYCQIGNK
::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
XP_006 CQSYNGKQVYKETCISFIKDFLAKNLIIVIGISFGLAVIEILGLVFSMVLYCQIGNK
190 200 210 220 230
>>XP_016875402 (OMIM: 600769) tetraspanin-8 isoform X1 [ (237 aa)
initn: 1549 init1: 1549 opt: 1549 Z-score: 1963.4 bits: 370.7 E(92274): 1.4e-102
Smith-Waterman score: 1549; 98.7% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KE2 MAGVSACIKYSMFTFNFLFWLCGILILALAIWVRISNDSQAIFGSEDVGSSSYVAVDILI
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
XP_016 MAGVSACIKYSMFTFNFLFWLCGILILALAIWVRVSNDSQAIFGSEDVGSSSYVAVDILI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AVGAIIMILGFLACCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIVNET
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVGAIIMILGFLGCCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIVNET
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELCACLDKQRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELCACLDKQRP
130 140 150 160 170 180
190 200 210 220 230
pF1KE2 CQSYNGKQVYKETCISFIKDFLAKNLIIVIGIAFGLAVIEILGLVFSMVLYCQIGNK
::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
XP_016 CQSYNGKQVYKETCISFIKDFLAKNLIIVIGISFGLAVIEILGLVFSMVLYCQIGNK
190 200 210 220 230
>>NP_001020407 (OMIM: 602644) tetraspanin-4 isoform a [H (238 aa)
initn: 442 init1: 215 opt: 505 Z-score: 644.8 bits: 126.7 E(92274): 3.8e-29
Smith-Waterman score: 505; 37.3% identity (69.1% similar) in 236 aa overlap (6-234:4-230)
10 20 30 40 50
pF1KE2 MAGVSAC---IKYSMFTFNFLFWLCGILILALAIWVRISNDSQAIFGSEDVGSSSYVAVD
:: .:: ::.::.:::: : .:...::. .. : : ..: . : :..
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSS---SFPSLSAAN
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 ILIAVGAIIMILGFLACCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIV
.:: .::..: .::..: :::::..:.:: ::. :::..::... .:: .. .: :: .
NP_001 LLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NETLYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGN--NFQHYPELCACL
.. : .. .: .. :. . .: ..: .:.::: :.. .:: . : . :. : ::
NP_001 QQDLKKGLHLYGTQGNV--GLTNAWSIIQTDFRCCG-VSNYTDWFEVYNATRVPDSC-CL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 DKQRPCQSYNGKQVYKETCISFIKDFLAKNLIIVIGIAFGL--AVIEILGLVFSMVLYCQ
. .. : . .: : .: .: .::. ..:: ::: :...::::.:.:..:::
NP_001 EFSESCGLHAPGTWWKAPCYETVKVWLQENLL-AVGI-FGLCTALVQILGLTFAMTMYCQ
180 190 200 210 220
pF1KE2 IGNK
.
NP_001 VVKADTYCA
230
>>NP_001020405 (OMIM: 602644) tetraspanin-4 isoform a [H (238 aa)
initn: 442 init1: 215 opt: 505 Z-score: 644.8 bits: 126.7 E(92274): 3.8e-29
Smith-Waterman score: 505; 37.3% identity (69.1% similar) in 236 aa overlap (6-234:4-230)
10 20 30 40 50
pF1KE2 MAGVSAC---IKYSMFTFNFLFWLCGILILALAIWVRISNDSQAIFGSEDVGSSSYVAVD
:: .:: ::.::.:::: : .:...::. .. : : ..: . : :..
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSS---SFPSLSAAN
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 ILIAVGAIIMILGFLACCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIV
.:: .::..: .::..: :::::..:.:: ::. :::..::... .:: .. .: :: .
NP_001 LLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NETLYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGN--NFQHYPELCACL
.. : .. .: .. :. . .: ..: .:.::: :.. .:: . : . :. : ::
NP_001 QQDLKKGLHLYGTQGNV--GLTNAWSIIQTDFRCCG-VSNYTDWFEVYNATRVPDSC-CL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 DKQRPCQSYNGKQVYKETCISFIKDFLAKNLIIVIGIAFGL--AVIEILGLVFSMVLYCQ
. .. : . .: : .: .: .::. ..:: ::: :...::::.:.:..:::
NP_001 EFSESCGLHAPGTWWKAPCYETVKVWLQENLL-AVGI-FGLCTALVQILGLTFAMTMYCQ
180 190 200 210 220
pF1KE2 IGNK
.
NP_001 VVKADTYCA
230
>>NP_001020406 (OMIM: 602644) tetraspanin-4 isoform a [H (238 aa)
initn: 442 init1: 215 opt: 505 Z-score: 644.8 bits: 126.7 E(92274): 3.8e-29
Smith-Waterman score: 505; 37.3% identity (69.1% similar) in 236 aa overlap (6-234:4-230)
10 20 30 40 50
pF1KE2 MAGVSAC---IKYSMFTFNFLFWLCGILILALAIWVRISNDSQAIFGSEDVGSSSYVAVD
:: .:: ::.::.:::: : .:...::. .. : : ..: . : :..
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSS---SFPSLSAAN
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 ILIAVGAIIMILGFLACCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIV
.:: .::..: .::..: :::::..:.:: ::. :::..::... .:: .. .: :: .
NP_001 LLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NETLYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGN--NFQHYPELCACL
.. : .. .: .. :. . .: ..: .:.::: :.. .:: . : . :. : ::
NP_001 QQDLKKGLHLYGTQGNV--GLTNAWSIIQTDFRCCG-VSNYTDWFEVYNATRVPDSC-CL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 DKQRPCQSYNGKQVYKETCISFIKDFLAKNLIIVIGIAFGL--AVIEILGLVFSMVLYCQ
. .. : . .: : .: .: .::. ..:: ::: :...::::.:.:..:::
NP_001 EFSESCGLHAPGTWWKAPCYETVKVWLQENLL-AVGI-FGLCTALVQILGLTFAMTMYCQ
180 190 200 210 220
pF1KE2 IGNK
.
NP_001 VVKADTYCA
230
>>XP_005253159 (OMIM: 602644) tetraspanin-4 isoform X2 [ (238 aa)
initn: 442 init1: 215 opt: 505 Z-score: 644.8 bits: 126.7 E(92274): 3.8e-29
Smith-Waterman score: 505; 37.3% identity (69.1% similar) in 236 aa overlap (6-234:4-230)
10 20 30 40 50
pF1KE2 MAGVSAC---IKYSMFTFNFLFWLCGILILALAIWVRISNDSQAIFGSEDVGSSSYVAVD
:: .:: ::.::.:::: : .:...::. .. : : ..: . : :..
XP_005 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSS---SFPSLSAAN
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 ILIAVGAIIMILGFLACCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIV
.:: .::..: .::..: :::::..:.:: ::. :::..::... .:: .. .: :: .
XP_005 LLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NETLYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGN--NFQHYPELCACL
.. : .. .: .. :. . .: ..: .:.::: :.. .:: . : . :. : ::
XP_005 QQDLKKGLHLYGTQGNV--GLTNAWSIIQTDFRCCG-VSNYTDWFEVYNATRVPDSC-CL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 DKQRPCQSYNGKQVYKETCISFIKDFLAKNLIIVIGIAFGL--AVIEILGLVFSMVLYCQ
. .. : . .: : .: .: .::. ..:: ::: :...::::.:.:..:::
XP_005 EFSESCGLHAPGTWWKAPCYETVKVWLQENLL-AVGI-FGLCTALVQILGLTFAMTMYCQ
180 190 200 210 220
pF1KE2 IGNK
.
XP_005 VVKADTYCA
230
>>NP_001020409 (OMIM: 602644) tetraspanin-4 isoform a [H (238 aa)
initn: 442 init1: 215 opt: 505 Z-score: 644.8 bits: 126.7 E(92274): 3.8e-29
Smith-Waterman score: 505; 37.3% identity (69.1% similar) in 236 aa overlap (6-234:4-230)
10 20 30 40 50
pF1KE2 MAGVSAC---IKYSMFTFNFLFWLCGILILALAIWVRISNDSQAIFGSEDVGSSSYVAVD
:: .:: ::.::.:::: : .:...::. .. : : ..: . : :..
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSS---SFPSLSAAN
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 ILIAVGAIIMILGFLACCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIV
.:: .::..: .::..: :::::..:.:: ::. :::..::... .:: .. .: :: .
NP_001 LLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NETLYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGN--NFQHYPELCACL
.. : .. .: .. :. . .: ..: .:.::: :.. .:: . : . :. : ::
NP_001 QQDLKKGLHLYGTQGNV--GLTNAWSIIQTDFRCCG-VSNYTDWFEVYNATRVPDSC-CL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 DKQRPCQSYNGKQVYKETCISFIKDFLAKNLIIVIGIAFGL--AVIEILGLVFSMVLYCQ
. .. : . .: : .: .: .::. ..:: ::: :...::::.:.:..:::
NP_001 EFSESCGLHAPGTWWKAPCYETVKVWLQENLL-AVGI-FGLCTALVQILGLTFAMTMYCQ
180 190 200 210 220
pF1KE2 IGNK
.
NP_001 VVKADTYCA
230
>>NP_003262 (OMIM: 602644) tetraspanin-4 isoform a [Homo (238 aa)
initn: 442 init1: 215 opt: 505 Z-score: 644.8 bits: 126.7 E(92274): 3.8e-29
Smith-Waterman score: 505; 37.3% identity (69.1% similar) in 236 aa overlap (6-234:4-230)
10 20 30 40 50
pF1KE2 MAGVSAC---IKYSMFTFNFLFWLCGILILALAIWVRISNDSQAIFGSEDVGSSSYVAVD
:: .:: ::.::.:::: : .:...::. .. : : ..: . : :..
NP_003 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSS---SFPSLSAAN
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 ILIAVGAIIMILGFLACCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIV
.:: .::..: .::..: :::::..:.:: ::. :::..::... .:: .. .: :: .
NP_003 LLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NETLYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGN--NFQHYPELCACL
.. : .. .: .. :. . .: ..: .:.::: :.. .:: . : . :. : ::
NP_003 QQDLKKGLHLYGTQGNV--GLTNAWSIIQTDFRCCG-VSNYTDWFEVYNATRVPDSC-CL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 DKQRPCQSYNGKQVYKETCISFIKDFLAKNLIIVIGIAFGL--AVIEILGLVFSMVLYCQ
. .. : . .: : .: .: .::. ..:: ::: :...::::.:.:..:::
NP_003 EFSESCGLHAPGTWWKAPCYETVKVWLQENLL-AVGI-FGLCTALVQILGLTFAMTMYCQ
180 190 200 210 220
pF1KE2 IGNK
.
NP_003 VVKADTYCA
230
>>NP_001020408 (OMIM: 602644) tetraspanin-4 isoform a [H (238 aa)
initn: 442 init1: 215 opt: 505 Z-score: 644.8 bits: 126.7 E(92274): 3.8e-29
Smith-Waterman score: 505; 37.3% identity (69.1% similar) in 236 aa overlap (6-234:4-230)
10 20 30 40 50
pF1KE2 MAGVSAC---IKYSMFTFNFLFWLCGILILALAIWVRISNDSQAIFGSEDVGSSSYVAVD
:: .:: ::.::.:::: : .:...::. .. : : ..: . : :..
NP_001 MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSS---SFPSLSAAN
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 ILIAVGAIIMILGFLACCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIV
.:: .::..: .::..: :::::..:.:: ::. :::..::... .:: .. .: :: .
NP_001 LLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NETLYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGN--NFQHYPELCACL
.. : .. .: .. :. . .: ..: .:.::: :.. .:: . : . :. : ::
NP_001 QQDLKKGLHLYGTQGNV--GLTNAWSIIQTDFRCCG-VSNYTDWFEVYNATRVPDSC-CL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 DKQRPCQSYNGKQVYKETCISFIKDFLAKNLIIVIGIAFGL--AVIEILGLVFSMVLYCQ
. .. : . .: : .: .: .::. ..:: ::: :...::::.:.:..:::
NP_001 EFSESCGLHAPGTWWKAPCYETVKVWLQENLL-AVGI-FGLCTALVQILGLTFAMTMYCQ
180 190 200 210 220
pF1KE2 IGNK
.
NP_001 VVKADTYCA
230
237 residues in 1 query sequences
65279912 residues in 92274 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Dec 20 16:32:36 2018 done: Thu Dec 20 16:32:37 2018
Total Scan time: 2.800 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]