Result of FASTA (omim) for
pFN21AE2724
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2724, 199 aa
1>>>pF1KE2724 199 - 199 aa - 199 aa
Library: /omim/omim.rfq.tfa
64536644 residues in 91102 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9454+/-0.000312; mu= 15.2228+/- 0.019
mean_var=59.6341+/-12.169, 0's: 0 Z-trim(115.9): 36 B-trim: 1289 in 1/53
Lambda= 0.166084
statistics sampled from 27527 (27563) to 27527 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.303), width: 16
Scan time: 2.710
The best scores are: opt bits E(91102)
XP_006717226 (OMIM: 608704) nicotinamide riboside ( 199) 1339 328.7 3.9e-90
XP_016870359 (OMIM: 608704) nicotinamide riboside ( 199) 1339 328.7 3.9e-90
NP_060351 (OMIM: 608704) nicotinamide riboside kin ( 199) 1339 328.7 3.9e-90
NP_001317608 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86
NP_001317607 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86
XP_016870358 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86
XP_011517119 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86
XP_024303358 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86
XP_016870357 (OMIM: 608704) nicotinamide riboside ( 203) 1284 315.6 3.7e-86
NP_733778 (OMIM: 608705) nicotinamide riboside kin ( 230) 715 179.3 4.5e-45
NP_001276046 (OMIM: 608705) nicotinamide riboside ( 235) 695 174.5 1.3e-43
NP_001121075 (OMIM: 608704) nicotinamide riboside ( 175) 679 170.6 1.4e-42
XP_016870363 (OMIM: 608704) nicotinamide riboside ( 175) 679 170.6 1.4e-42
XP_016870361 (OMIM: 608704) nicotinamide riboside ( 179) 624 157.4 1.3e-38
XP_024303360 (OMIM: 608704) nicotinamide riboside ( 179) 624 157.4 1.3e-38
XP_016870360 (OMIM: 608704) nicotinamide riboside ( 179) 624 157.4 1.3e-38
XP_024303359 (OMIM: 608704) nicotinamide riboside ( 179) 624 157.4 1.3e-38
XP_016870362 (OMIM: 608704) nicotinamide riboside ( 179) 624 157.4 1.3e-38
XP_016882086 (OMIM: 608705) nicotinamide riboside ( 145) 462 118.5 5.5e-27
XP_006722789 (OMIM: 608705) nicotinamide riboside ( 150) 442 113.7 1.6e-25
XP_024307220 (OMIM: 608705) nicotinamide riboside ( 206) 340 89.4 4.6e-18
XP_006722788 (OMIM: 608705) nicotinamide riboside ( 211) 254 68.8 7.5e-12
>>XP_006717226 (OMIM: 608704) nicotinamide riboside kina (199 aa)
initn: 1339 init1: 1339 opt: 1339 Z-score: 1739.6 bits: 328.7 E(91102): 3.9e-90
Smith-Waterman score: 1339; 100.0% identity (100.0% similar) in 199 aa overlap (1-199:1-199)
10 20 30 40 50 60
pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ
130 140 150 160 170 180
190
pF1KE2 VYEDLIQELAKQKCLQVTA
:::::::::::::::::::
XP_006 VYEDLIQELAKQKCLQVTA
190
>>XP_016870359 (OMIM: 608704) nicotinamide riboside kina (199 aa)
initn: 1339 init1: 1339 opt: 1339 Z-score: 1739.6 bits: 328.7 E(91102): 3.9e-90
Smith-Waterman score: 1339; 100.0% identity (100.0% similar) in 199 aa overlap (1-199:1-199)
10 20 30 40 50 60
pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ
130 140 150 160 170 180
190
pF1KE2 VYEDLIQELAKQKCLQVTA
:::::::::::::::::::
XP_016 VYEDLIQELAKQKCLQVTA
190
>>NP_060351 (OMIM: 608704) nicotinamide riboside kinase (199 aa)
initn: 1339 init1: 1339 opt: 1339 Z-score: 1739.6 bits: 328.7 E(91102): 3.9e-90
Smith-Waterman score: 1339; 100.0% identity (100.0% similar) in 199 aa overlap (1-199:1-199)
10 20 30 40 50 60
pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSYFLTI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEEDLFLQ
130 140 150 160 170 180
190
pF1KE2 VYEDLIQELAKQKCLQVTA
:::::::::::::::::::
NP_060 VYEDLIQELAKQKCLQVTA
190
>>NP_001317608 (OMIM: 608704) nicotinamide riboside kina (203 aa)
initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86
Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203)
10 20 30 40 50
pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
:: ::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
130 140 150 160 170 180
180 190
pF1KE2 LFLQVYEDLIQELAKQKCLQVTA
:::::::::::::::::::::::
NP_001 LFLQVYEDLIQELAKQKCLQVTA
190 200
>>NP_001317607 (OMIM: 608704) nicotinamide riboside kina (203 aa)
initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86
Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203)
10 20 30 40 50
pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
:: ::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
130 140 150 160 170 180
180 190
pF1KE2 LFLQVYEDLIQELAKQKCLQVTA
:::::::::::::::::::::::
NP_001 LFLQVYEDLIQELAKQKCLQVTA
190 200
>>XP_016870358 (OMIM: 608704) nicotinamide riboside kina (203 aa)
initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86
Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203)
10 20 30 40 50
pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
:: ::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
130 140 150 160 170 180
180 190
pF1KE2 LFLQVYEDLIQELAKQKCLQVTA
:::::::::::::::::::::::
XP_016 LFLQVYEDLIQELAKQKCLQVTA
190 200
>>XP_011517119 (OMIM: 608704) nicotinamide riboside kina (203 aa)
initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86
Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203)
10 20 30 40 50
pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
:: ::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
130 140 150 160 170 180
180 190
pF1KE2 LFLQVYEDLIQELAKQKCLQVTA
:::::::::::::::::::::::
XP_011 LFLQVYEDLIQELAKQKCLQVTA
190 200
>>XP_024303358 (OMIM: 608704) nicotinamide riboside kina (203 aa)
initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86
Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203)
10 20 30 40 50
pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
:: ::::::::::::::::::::::::::::::::::::::::::::::
XP_024 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
130 140 150 160 170 180
180 190
pF1KE2 LFLQVYEDLIQELAKQKCLQVTA
:::::::::::::::::::::::
XP_024 LFLQVYEDLIQELAKQKCLQVTA
190 200
>>XP_016870357 (OMIM: 608704) nicotinamide riboside kina (203 aa)
initn: 1284 init1: 1284 opt: 1284 Z-score: 1668.3 bits: 315.6 E(91102): 3.7e-86
Smith-Waterman score: 1284; 99.5% identity (99.5% similar) in 192 aa overlap (8-199:12-203)
10 20 30 40 50
pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
:: ::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGKRRHRRGNVISCVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLEALNMEKMMSAISCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
130 140 150 160 170 180
180 190
pF1KE2 LFLQVYEDLIQELAKQKCLQVTA
:::::::::::::::::::::::
XP_016 LFLQVYEDLIQELAKQKCLQVTA
190 200
>>NP_733778 (OMIM: 608705) nicotinamide riboside kinase (230 aa)
initn: 697 init1: 434 opt: 715 Z-score: 930.7 bits: 179.3 E(91102): 4.5e-45
Smith-Waterman score: 715; 57.0% identity (77.7% similar) in 193 aa overlap (1-189:1-191)
10 20 30 40 50 60
pF1KE2 MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEA
:: .:.::.:.::.:::::...: . :::: :: :::::::...: . ..:: :.::::.
NP_733 MK-LIVGIGGMTNGGKTTLTNSLLRALPNCCVIHQDDFFKPQDQIAVGEDGFKQWDVLES
10 20 30 40 50
70 80 90 100 110
pF1KE2 LNMEKMMSAISCWMES----ARHSVVSTDQESAEEIPILIIEGFLLFNYKPLDTIWNRSY
:.:: :..... :. : :: ::. : : . ::..:::::..:::: ...: :
NP_733 LDMEAMLDTVQAWLSSPQKFARAHGVSV-QPEASDTHILLLEGFLLYSYKPLVDLYSRRY
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 FLTIPYEECKRRRSTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTKSEED
:::.:::::: ::::: : :: :: ::::::::: ::::::. ::::::: ::.:.
NP_733 FLTVPYEECKWRRSTRNYTVPDPPGLFDGHVWPMYQKYRQEMEANGVEVVYLDGMKSREE
120 130 140 150 160 170
180 190
pF1KE2 LFLQVYEDLIQELAKQKCLQVTA
:: .: ::. . :
NP_733 LFREVLEDIQNSLLNRSQESAPSPARPARTQGPGRGCGHRTARPAASQQDSM
180 190 200 210 220 230
199 residues in 1 query sequences
64536644 residues in 91102 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Jun 13 19:13:02 2018 done: Wed Jun 13 19:13:02 2018
Total Scan time: 2.710 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]