Result of FASTA (omim) for
pFN21AE2622
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2622, 349 aa
1>>>pF1KE2622 349 - 349 aa - 349 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0954+/-0.000454; mu= 7.4612+/- 0.028
mean_var=176.9242+/-37.460, 0's: 0 Z-trim(115.1): 254 B-trim: 938 in 2/59
Lambda= 0.096423
statistics sampled from 24935 (25324) to 24935 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.664), E-opt: 0.2 (0.297), width: 16
Scan time: 6.690
The best scores are: opt bits E(85289)
XP_016881684 (OMIM: 615747) PREDICTED: carcinoembr ( 349) 2327 336.4 5.7e-92
NP_001807 (OMIM: 615747) carcinoembryonic antigen- ( 349) 2327 336.4 5.7e-92
XP_016881683 (OMIM: 615747) PREDICTED: carcinoembr ( 368) 2162 313.4 4.8e-85
XP_011524642 (OMIM: 615747) PREDICTED: carcinoembr ( 415) 2162 313.5 5.3e-85
XP_016881685 (OMIM: 615747) PREDICTED: carcinoembr ( 331) 2152 312.0 1.2e-84
NP_002474 (OMIM: 163980) carcinoembryonic antigen- ( 344) 1792 261.9 1.4e-69
NP_001171745 (OMIM: 109770) carcinoembryonic antig ( 368) 1778 260.0 5.8e-69
NP_001171742 (OMIM: 109770) carcinoembryonic antig ( 430) 1778 260.1 6.5e-69
XP_011525508 (OMIM: 109770) PREDICTED: carcinoembr ( 351) 1730 253.3 5.8e-67
NP_001020083 (OMIM: 109770) carcinoembryonic antig ( 464) 1725 252.8 1.1e-66
NP_001192273 (OMIM: 109770) carcinoembryonic antig ( 468) 1725 252.8 1.1e-66
NP_001703 (OMIM: 109770) carcinoembryonic antigen- ( 526) 1725 252.8 1.2e-66
NP_001171744 (OMIM: 109770) carcinoembryonic antig ( 461) 1722 252.3 1.5e-66
XP_011525292 (OMIM: 163980) PREDICTED: carcinoembr ( 324) 1714 251.1 2.6e-66
XP_005258470 (OMIM: 114890) PREDICTED: carcinoembr ( 524) 1614 237.4 5.5e-62
XP_016881634 (OMIM: 114890) PREDICTED: carcinoembr ( 701) 1614 237.5 6.7e-62
NP_001295327 (OMIM: 114890) carcinoembryonic antig ( 701) 1614 237.5 6.7e-62
NP_004354 (OMIM: 114890) carcinoembryonic antigen- ( 702) 1614 237.5 6.7e-62
NP_001278413 (OMIM: 114890) carcinoembryonic antig ( 702) 1614 237.5 6.7e-62
XP_011524624 (OMIM: 114890) PREDICTED: carcinoembr ( 524) 1607 236.4 1.1e-61
XP_011524643 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 1586 233.1 5e-61
XP_016881687 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 1586 233.1 5e-61
XP_011524644 (OMIM: 615747) PREDICTED: carcinoembr ( 255) 1586 233.1 5e-61
XP_011525428 (OMIM: 176392) PREDICTED: pregnancy-s ( 357) 1304 194.1 4e-49
XP_011525288 (OMIM: 176397) PREDICTED: pregnancy-s ( 326) 1300 193.5 5.6e-49
XP_005259132 (OMIM: 176398) PREDICTED: pregnancy-s ( 402) 1285 191.5 2.7e-48
NP_001288637 (OMIM: 176398) pregnancy-specific bet ( 333) 1281 190.8 3.5e-48
NP_998798 (OMIM: 176393) pregnancy-specific beta-1 ( 326) 1277 190.3 5.1e-48
NP_112536 (OMIM: 176391) pregnancy-specific beta-1 ( 335) 1274 189.9 7e-48
XP_016882491 (OMIM: 176393) PREDICTED: pregnancy-s ( 333) 1273 189.7 7.6e-48
NP_001263424 (OMIM: 176393) pregnancy-specific bet ( 326) 1270 189.3 1e-47
XP_011525427 (OMIM: 176390) PREDICTED: pregnancy-s ( 333) 1267 188.9 1.4e-47
XP_016882490 (OMIM: 176393) PREDICTED: pregnancy-s ( 333) 1266 188.8 1.5e-47
NP_001317453 (OMIM: 176390) pregnancy-specific bet ( 326) 1262 188.2 2.2e-47
NP_001123486 (OMIM: 176394) pregnancy-specific bet ( 335) 1262 188.2 2.2e-47
NP_002772 (OMIM: 176394) pregnancy-specific beta-1 ( 335) 1262 188.2 2.2e-47
XP_016882492 (OMIM: 176394) PREDICTED: pregnancy-s ( 335) 1262 188.2 2.2e-47
XP_005259122 (OMIM: 176390) PREDICTED: pregnancy-s ( 333) 1257 187.5 3.6e-47
NP_002776 (OMIM: 176401) pregnancy-specific beta-1 ( 335) 1255 187.2 4.4e-47
XP_016882494 (OMIM: 176398) PREDICTED: pregnancy-s ( 402) 1246 186.1 1.2e-46
NP_001288636 (OMIM: 176398) pregnancy-specific bet ( 333) 1242 185.4 1.5e-46
XP_016881635 (OMIM: 114890) PREDICTED: carcinoembr ( 617) 1220 182.6 1.9e-45
XP_016881686 (OMIM: 615747) PREDICTED: carcinoembr ( 295) 1203 179.9 6e-45
XP_016882489 (OMIM: 176393) PREDICTED: pregnancy-s ( 342) 1168 175.1 1.9e-43
XP_016882488 (OMIM: 176393) PREDICTED: pregnancy-s ( 349) 1164 174.6 2.9e-43
XP_016882487 (OMIM: 176393) PREDICTED: pregnancy-s ( 349) 1157 173.6 5.7e-43
XP_011525429 (OMIM: 176392) PREDICTED: pregnancy-s ( 272) 946 144.1 3.3e-34
NP_066296 (OMIM: 176392) pregnancy-specific beta-1 ( 428) 777 120.8 5.3e-27
NP_001276971 (OMIM: 176396) putative pregnancy-spe ( 238) 762 118.5 1.5e-26
NP_001193579 (OMIM: 176396) putative pregnancy-spe ( 297) 762 118.6 1.8e-26
>>XP_016881684 (OMIM: 615747) PREDICTED: carcinoembryoni (349 aa)
initn: 2327 init1: 2327 opt: 2327 Z-score: 1772.1 bits: 336.4 E(85289): 5.7e-92
Smith-Waterman score: 2327; 100.0% identity (100.0% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
250 260 270 280 290 300
310 320 330 340
pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI
310 320 330 340
>>NP_001807 (OMIM: 615747) carcinoembryonic antigen-rela (349 aa)
initn: 2327 init1: 2327 opt: 2327 Z-score: 1772.1 bits: 336.4 E(85289): 5.7e-92
Smith-Waterman score: 2327; 100.0% identity (100.0% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
250 260 270 280 290 300
310 320 330 340
pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI
310 320 330 340
>>XP_016881683 (OMIM: 615747) PREDICTED: carcinoembryoni (368 aa)
initn: 2209 init1: 2155 opt: 2162 Z-score: 1647.7 bits: 313.4 E(85289): 4.8e-85
Smith-Waterman score: 2162; 97.9% identity (98.5% similar) in 331 aa overlap (1-328:1-331)
10 20 30 40 50 60
pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
250 260 270 280 290 300
310 320 330 340
pF1KE2 TTNSATGRNRTTVRMITVSDAL-VQG--SSPGLSARATVSIMIGVLARVALI
::::::::::::::::::: : .:: .::
XP_016 TTNSATGRNRTTVRMITVSAARNIQGFETSPQRSPNGRRSPLDDGGAAQTAPISAPSSLL
310 320 330 340 350 360
XP_016 PAIETCHN
>>XP_011524642 (OMIM: 615747) PREDICTED: carcinoembryoni (415 aa)
initn: 2209 init1: 2155 opt: 2162 Z-score: 1647.1 bits: 313.5 E(85289): 5.3e-85
Smith-Waterman score: 2162; 97.9% identity (98.5% similar) in 331 aa overlap (1-328:1-331)
10 20 30 40 50 60
pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
250 260 270 280 290 300
310 320 330 340
pF1KE2 TTNSATGRNRTTVRMITVSDAL-VQG--SSPGLSARATVSIMIGVLARVALI
::::::::::::::::::: : .:: .::
XP_011 TTNSATGRNRTTVRMITVSAARNIQGFETSPQRSPNGRRSPLDDGGAAQTAPISAPSSLV
310 320 330 340 350 360
XP_011 TGPALTPPGVGPRCMEKVLRWPIPNLAKSSCQLKPSLPPVRLHKNGKTGSLREDS
370 380 390 400 410
>>XP_016881685 (OMIM: 615747) PREDICTED: carcinoembryoni (331 aa)
initn: 2152 init1: 2152 opt: 2152 Z-score: 1640.8 bits: 312.0 E(85289): 1.2e-84
Smith-Waterman score: 2152; 100.0% identity (100.0% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
250 260 270 280 290 300
310 320 330 340
pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI
:::::::::::::::::::
XP_016 TTNSATGRNRTTVRMITVSAPCHRDLPQLRH
310 320 330
>>NP_002474 (OMIM: 163980) carcinoembryonic antigen-rela (344 aa)
initn: 1706 init1: 1706 opt: 1792 Z-score: 1369.9 bits: 261.9 E(85289): 1.4e-69
Smith-Waterman score: 1792; 78.2% identity (89.4% similar) in 349 aa overlap (1-349:1-344)
10 20 30 40 50 60
pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
::: ::: :: ..::. .::::::.:::::::::.::::..: :.:::::::::.:::::
NP_002 MGPPSAPPCRLHVPWKEVLLTASLLTFWNPPTTAKLTIESTPFNVAEGKEVLLLAHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
. ::.::::: ::.: :.::::..:: :::::::.:::::::::::..:::.:::: :
NP_002 NRIGYSWYKGERVDGNSLIVGYVIGTQQATPGPAYSGRETIYPNASLLIQNVTQNDTGFY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
:::::: .:..::.:::: :.:: ::::::::::::::::::::::::::.:::::::::
NP_002 TLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPEVQNTTYLWWV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
::::::::::::::::: ::::::: :::.: :::::::::::: :::::::::::::.:
NP_002 NGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQNPASANRSDPVTLNVLYGPDVP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
::::: . :. : :::::::::::::.:::: .:::::: ::.:::::::..::::: :.
NP_002 TISPSKANYRPGENLNLSCHAASNPPAQYSWFINGTFQQSTQELFIPNITVNNSGSYMCQ
250 260 270 280 290 300
310 320 330 340
pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI
. ::::: ::::: ::::: ::.: ::: :::.: ::::::::::
NP_002 AHNSATGLNRTTVTMITVS-----GSAPVLSAVATVGITIGVLARVALI
310 320 330 340
>>NP_001171745 (OMIM: 109770) carcinoembryonic antigen-r (368 aa)
initn: 1837 init1: 1727 opt: 1778 Z-score: 1359.1 bits: 260.0 E(85289): 5.8e-69
Smith-Waterman score: 1778; 76.9% identity (90.9% similar) in 350 aa overlap (1-349:1-348)
10 20 30 40 50 60
pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
:: .::: : :.:::::::::::.:::::::::::: :..: :.:::::::::::::::
NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
. ::.::::: ::.::.:.::.:..:: ::::: :.:::::::::::..:::.:::: :
NP_001 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
:::::: .:..::.:::: :.:: ::::::::::::::::::::::::::::.::::::.
NP_001 TLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWWI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
:.:::::::::::::::::::::::::::.::::::::::.::: :::::::: ::::.:
NP_001 NNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
:::::::::. :.::.:::.::::::.:::: .:::::: ::.:::::::..:::::.::
NP_001 TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCH
250 260 270 280 290 300
310 320 330 340
pF1KE2 TTNSATGRNRTTVRMITVSD-ALVQGSSPGLSARATVSIMIGVLARVALI
..::.:: :::::. : :.: :: : . ::: : ..:.:::.: ::::
NP_001 ANNSVTGCNRTTVKTIIVTDNALPQEN--GLSPGAIAGIVIGVVALVALIAVALACFLHF
310 320 330 340 350
NP_001 GKTGSSGPLQ
360
>>NP_001171742 (OMIM: 109770) carcinoembryonic antigen-r (430 aa)
initn: 1837 init1: 1727 opt: 1778 Z-score: 1358.2 bits: 260.1 E(85289): 6.5e-69
Smith-Waterman score: 1778; 76.9% identity (90.9% similar) in 350 aa overlap (1-349:1-348)
10 20 30 40 50 60
pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
:: .::: : :.:::::::::::.:::::::::::: :..: :.:::::::::::::::
NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
. ::.::::: ::.::.:.::.:..:: ::::: :.:::::::::::..:::.:::: :
NP_001 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
:::::: .:..::.:::: :.:: ::::::::::::::::::::::::::::.::::::.
NP_001 TLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWWI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
:.:::::::::::::::::::::::::::.::::::::::.::: :::::::: ::::.:
NP_001 NNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
:::::::::. :.::.:::.::::::.:::: .:::::: ::.:::::::..:::::.::
NP_001 TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCH
250 260 270 280 290 300
310 320 330 340
pF1KE2 TTNSATGRNRTTVRMITVSD-ALVQGSSPGLSARATVSIMIGVLARVALI
..::.:: :::::. : :.: :: : . ::: : ..:.:::.: ::::
NP_001 ANNSVTGCNRTTVKTIIVTDNALPQEN--GLSPGAIAGIVIGVVALVALIAVALACFLHF
310 320 330 340 350
NP_001 GKTGRASDQRDLTEHKPSVSNHTQDHSNDPPNKMNEVTYSTLNFEAQQPTQPTSASPSLT
360 370 380 390 400 410
>>XP_011525508 (OMIM: 109770) PREDICTED: carcinoembryoni (351 aa)
initn: 1788 init1: 1729 opt: 1730 Z-score: 1323.2 bits: 253.3 E(85289): 5.8e-67
Smith-Waterman score: 1730; 77.1% identity (91.3% similar) in 332 aa overlap (1-329:1-332)
10 20 30 40 50 60
pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
:: .::: : :.:::::::::::.:::::::::::: :..: :.:::::::::::::::
XP_011 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
. ::.::::: ::.::.:.::.:..:: ::::: :.:::::::::::..:::.:::: :
XP_011 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
:::::: .:..::.:::: :.:: ::::::::::::::::::::::::::::.::::::.
XP_011 TLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWWI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
:.:::::::::::::::::::::::::::.::::::::::.::: :::::::: ::::.:
XP_011 NNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
:::::::::. :.::.:::.::::::.:::: .:::::: ::.:::::::..:::::.::
XP_011 TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCH
250 260 270 280 290 300
310 320 330 340
pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSS---PGLSARATVSIMIGVLARVALI
..::.:: :::::. : :... : : . ::
XP_011 ANNSVTGCNRTTVKTIIVTESPVLGEDEAVPGQHHPQHKPCQEGGCWDVLV
310 320 330 340 350
>>NP_001020083 (OMIM: 109770) carcinoembryonic antigen-r (464 aa)
initn: 1831 init1: 1721 opt: 1725 Z-score: 1318.0 bits: 252.8 E(85289): 1.1e-66
Smith-Waterman score: 1725; 76.1% identity (90.7% similar) in 335 aa overlap (1-335:1-335)
10 20 30 40 50 60
pF1KE2 MGPISAPSCRWRIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQ
:: .::: : :.:::::::::::.:::::::::::: :..: :.:::::::::::::::
NP_001 MGHLSAPLHRVRVPWQGLLLTASLLTFWNPPTTAQLTTESMPFNVAEGKEVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DPRGYNWYKGETVDANRRIIGYVISNQQITPGPAYSNRETIYPNASLLMRNVTRNDTGSY
. ::.::::: ::.::.:.::.:..:: ::::: :.:::::::::::..:::.:::: :
NP_001 QLFGYSWYKGERVDGNRQIVGYAIGTQQATPGPANSGRETIYPNASLLIQNVTQNDTGFY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TLQVIKLNLMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWV
:::::: .:..::.:::: :.:: ::::::::::::::::::::::::::::.::::::.
NP_001 TLQVIKSDLVNEEATGQFHVYPELPKPSISSNNSNPVEDKDAVAFTCEPETQDTTYLWWI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 NGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYGPDAP
:.:::::::::::::::::::::::::::.::::::::::.::: :::::::: ::::.:
NP_001 NNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVTLNVTYGPDTP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 TISPSDTYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACH
:::::::::. :.::.:::.::::::.:::: .:::::: ::.:::::::..:::::.::
NP_001 TISPSDTYYRPGANLSLSCYAASNPPAQYSWLINGTFQQSTQELFIPNITVNNSGSYTCH
250 260 270 280 290 300
310 320 330 340
pF1KE2 TTNSATGRNRTTVRMITVSDALVQGSSPGLSARATVSIMIGVLARVALI
..::.:: :::::. : :.. ..: ..: :
NP_001 ANNSVTGCNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWF
310 320 330 340 350 360
NP_001 FKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALP
370 380 390 400 410 420
>--
initn: 351 init1: 248 opt: 256 Z-score: 213.6 bits: 48.4 E(85289): 3.7e-05
Smith-Waterman score: 256; 45.5% identity (68.2% similar) in 88 aa overlap (159-244:340-427)
130 140 150 160 170 180
pF1KE2 LMSEEVTGQFSVHPETPKPSISSNNSNPVEDKDAVAFTCEPETQNTTYLWWVNGQSLPVS
:::.: .:: . . . :. ..:::: :
NP_001 RTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSS
310 320 330 340 350 360
190 200 210 220 230 240
pF1KE2 PRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPASANFSDPVTLNVLYG--PDAPTISPSD
:..::.:: ::.. : :.:.: : ::. :: : : :::. ::: :. :. .::
NP_001 ERMKLSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLSPGA
370 380 390 400 410 420
250 260 270 280 290 300
pF1KE2 TYYHAGVNLNLSCHAASNPPSQYSWSVNGTFQQYTQKLFIPNITTKNSGSYACHTTNSAT
NP_001 IAGIVIGVVALVALIAVALACFLHFGKTGSSGPLQ
430 440 450 460
349 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 17:14:03 2016 done: Tue Nov 8 17:14:04 2016
Total Scan time: 6.690 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]