Result of FASTA (ccds) for
pFN21AE2620
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2620, 548 aa
1>>>pF1KE2620 548 - 548 aa - 548 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5576+/-0.00098; mu= 6.1308+/- 0.059
mean_var=259.3650+/-49.850, 0's: 0 Z-trim(115.3): 73 B-trim: 5 in 2/52
Lambda= 0.079638
statistics sampled from 15751 (15822) to 15751 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.486), width: 16
Scan time: 3.720
The best scores are: opt bits E(32554)
CCDS10414.1 WFIKKN1 gene_id:117166|Hs108|chr16 ( 548) 3953 467.3 2e-131
CCDS11575.1 WFIKKN2 gene_id:124857|Hs108|chr17 ( 576) 1582 194.9 2.1e-49
CCDS82159.1 WFIKKN2 gene_id:124857|Hs108|chr17 ( 483) 1279 160.1 5.7e-39
>>CCDS10414.1 WFIKKN1 gene_id:117166|Hs108|chr16 (548 aa)
initn: 3953 init1: 3953 opt: 3953 Z-score: 2472.9 bits: 467.3 E(32554): 2e-131
Smith-Waterman score: 3953; 100.0% identity (100.0% similar) in 548 aa overlap (1-548:1-548)
10 20 30 40 50 60
pF1KE2 MPALRPLLPLLLLLRLTSGAGLLPGLGSHPGVCPNQLSPNLWVDAQSTCERECSRDQDCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MPALRPLLPLLLLLRLTSGAGLLPGLGSHPGVCPNQLSPNLWVDAQSTCERECSRDQDCA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 AAEKCCINVCGLHSCVAARFPGSPAAPTTAASCEGFVCPQQGSDCDIWDGQPVCRCRDRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AAEKCCINVCGLHSCVAARFPGSPAAPTTAASCEGFVCPQQGSDCDIWDGQPVCRCRDRC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 EKEPSFTCASDGLTYYNRCYMDAEACLRGLHLHIVPCKHVLSWPPSSPGPPETTARPTPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EKEPSFTCASDGLTYYNRCYMDAEACLRGLHLHIVPCKHVLSWPPSSPGPPETTARPTPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 AAPVPPALYSSPSPQAVQVGGTASLHCDVSGRPPPAVTWEKQSHQRENLIMRPDQMYGNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AAPVPPALYSSPSPQAVQVGGTASLHCDVSGRPPPAVTWEKQSHQRENLIMRPDQMYGNV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 VVTSIGQLVLYNARPEDAGLYTCTARNAAGLLRADFPLSVVQREPARDAAPSIPAPAECL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VVTSIGQLVLYNARPEDAGLYTCTARNAAGLLRADFPLSVVQREPARDAAPSIPAPAECL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 PDVQACTGPTSPHLVLWHYDPQRGGCMTFPARGCDGAARGFETYEACQQACARGPGDACV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PDVQACTGPTSPHLVLWHYDPQRGGCMTFPARGCDGAARGFETYEACQQACARGPGDACV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 LPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDACPVPRTPPCRAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDACPVPRTPPCRAC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 RLRSKLALSLCRSDFAIVGRLTEVLEEPEAAGGIARVALEDVLKDDKMGLKFLGTKYLEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RLRSKLALSLCRSDFAIVGRLTEVLEEPEAAGGIARVALEDVLKDDKMGLKFLGTKYLEV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 TLSGMDWACPCPNMTAGDGPLVIMGEVRDGVAVLDAGSYVRAASEKRVKKILELLEKQAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TLSGMDWACPCPNMTAGDGPLVIMGEVRDGVAVLDAGSYVRAASEKRVKKILELLEKQAC
490 500 510 520 530 540
pF1KE2 ELLNRFQD
::::::::
CCDS10 ELLNRFQD
>>CCDS11575.1 WFIKKN2 gene_id:124857|Hs108|chr17 (576 aa)
initn: 1756 init1: 535 opt: 1582 Z-score: 1000.4 bits: 194.9 E(32554): 2.1e-49
Smith-Waterman score: 2193; 56.1% identity (77.0% similar) in 560 aa overlap (7-546:19-572)
10 20 30 40
pF1KE2 MPALRPLLPLLLLLRLTSGAGLLPGLG-SHPGVCPNQLSPNLWVDAQS
:: ::::: . . :: . :: :.:::...:::::::::
CCDS11 MWAPRCRRFWSRWEQVAALLLLLLLLGVPPRSLALPPIRYSHAGICPNDMNPNLWVDAQS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE2 TCERECSRDQDCAAAEKCCINVCGLHSCVAARF---PGS--PAAPTTAASCEGFVCPQQG
::.::: ::.: . :::: :::: .::::::. :. :.. :.:. :.: :::
CCDS11 TCRRECETDQECETYEKCCPNVCGTKSCVAARYMDVKGKKGPVGMPKEATCDHFMCLQQG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE2 SDCDIWDGQPVCRCRDRCEKEPSFTCASDGLTYYNRCYMDAEACLRGLHLHIVPCKHVLS
:.::::::::::.:.::::::::::::::::::::::::::::: .:. : .: :.. ..
CCDS11 SECDIWDGQPVCKCKDRCEKEPSFTCASDGLTYYNRCYMDAEACSKGITLAVVTCRYHFT
130 140 150 160 170 180
170 180 190 200 210
pF1KE2 WPPSSPGPPETTARPTPGAAPVP------PALYSSPSPQAVQVGGTASLHCDVSGRPPPA
:: .:: ::::: .:: .. .: ::: ..: :.: .: :.:. ::: ::: :
CCDS11 WPNTSPPPPETTMHPTTASPETPELDMAAPALLNNPVHQSVTMGETVSFLCDVVGRPRPE
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE2 VTWEKQSHQRENLIMRPDQMYGNVVVTSIGQLVLYNARPEDAGLYTCTARNAAGLLRADF
.::::: ..:::..:::... ::::::.:.:::.:::. .:::.:::::::.::.:::::
CCDS11 ITWEKQLEDRENVVMRPNHVRGNVVVTNIAQLVIYNAQLQDAGIYTCTARNVAGVLRADF
250 260 270 280 290 300
280 290 300 310 320
pF1KE2 PLSVVQREPARDAAPSIPA----PA-ECL--PDVQACTGPTSPHLVLWHYDPQRGGCMTF
:::::. . : .. : : :: ::: :: . : : . . ::.: : ..:.::
CCDS11 PLSVVRGHQAAATSESSPNGTAFPAAECLKPPDSEDC-GEEQTR---WHFDAQANNCLTF
310 320 330 340 350
330 340 350 360 370 380
pF1KE2 PARGCDGAARGFETYEACQQACARGPGDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVY
: :::::::. :: :: :: :::.::::... :::::. ::. :::
CCDS11 TFGHCHRNLNHFETYEACMLACMSGPLAACSLPALQGPCKAYAPRWAYNSQTGQCQSFVY
360 370 380 390 400 410
390 400 410 420 430 440
pF1KE2 GGCEGNGNNFHSRESCEDACPVPR-TPPCRACRLRSKLALSLCRSDFAIVGRLTEVLEEP
::::::::::.:::.::..:: :: . ::::. :.::. :.:::::.:.::..:. :::
CCDS11 GGCEGNGNNFESREACEESCPFPRGNQRCRACKPRQKLVTSFCRSDFVILGRVSELTEEP
420 430 440 450 460 470
450 460 470 480 490 500
pF1KE2 EAAGGIARVALEDVLKDDKMGLKFLGTKYLEVTLSGMDWACPCPNMTAGDGPLVIMGEVR
.. : : :....::::.:::::::: . ::::: .::::::::.:... ::.:::::
CCDS11 DS--GRALVTVDEVLKDEKMGLKFLGQEPLEVTLLHVDWACPCPNVTVSEMPLIIMGEVD
480 490 500 510 520 530
510 520 530 540
pF1KE2 DGVAVLDAGSYVRAASEKRVKKILELLEKQACELLNRFQD
:.:.: :.: :.: .::.:. :...:..:..:..:
CCDS11 GGMAMLRPDSFVGASSARRVRKLREVMHKKTCDVLKEFLGLH
540 550 560 570
>>CCDS82159.1 WFIKKN2 gene_id:124857|Hs108|chr17 (483 aa)
initn: 1451 init1: 535 opt: 1279 Z-score: 813.2 bits: 160.1 E(32554): 5.7e-39
Smith-Waterman score: 1890; 56.0% identity (77.8% similar) in 477 aa overlap (84-546:9-479)
60 70 80 90 100 110
pF1KE2 SRDQDCAAAEKCCINVCGLHSCVAARFPGSPAAPTTAASCEGFVCPQQGSDCDIWDGQPV
:.. :.:. :.: ::::.:::::::::
CCDS82 MDVKGKKGPVGMPKEATCDHFMCLQQGSECDIWDGQPV
10 20 30
120 130 140 150 160 170
pF1KE2 CRCRDRCEKEPSFTCASDGLTYYNRCYMDAEACLRGLHLHIVPCKHVLSWPPSSPGPPET
:.:.::::::::::::::::::::::::::::: .:. : .: :.. ..:: .:: ::::
CCDS82 CKCKDRCEKEPSFTCASDGLTYYNRCYMDAEACSKGITLAVVTCRYHFTWPNTSPPPPET
40 50 60 70 80 90
180 190 200 210 220
pF1KE2 TARPTPGAAPVP------PALYSSPSPQAVQVGGTASLHCDVSGRPPPAVTWEKQSHQRE
: .:: .. .: ::: ..: :.: .: :.:. ::: ::: : .::::: ..::
CCDS82 TMHPTTASPETPELDMAAPALLNNPVHQSVTMGETVSFLCDVVGRPRPEITWEKQLEDRE
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE2 NLIMRPDQMYGNVVVTSIGQLVLYNARPEDAGLYTCTARNAAGLLRADFPLSVVQREPAR
:..:::... ::::::.:.:::.:::. .:::.:::::::.::.::::::::::. . :
CCDS82 NVVMRPNHVRGNVVVTNIAQLVIYNAQLQDAGIYTCTARNVAGVLRADFPLSVVRGHQAA
160 170 180 190 200 210
290 300 310 320 330 340
pF1KE2 DAAPSIPA----PA-ECL--PDVQACTGPTSPHLVLWHYDPQRGGCMTFPARGCDGAARG
.. : : :: ::: :: . : : . . ::.: : ..:.:: :
CCDS82 ATSESSPNGTAFPAAECLKPPDSEDC-GEEQTR---WHFDAQANNCLTFTFGHCHRNLNH
220 230 240 250 260 270
350 360 370 380 390 400
pF1KE2 FETYEACQQACARGPGDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFH
:::::::. :: :: :: :::.::::... :::::. ::. :::::::::::::.
CCDS82 FETYEACMLACMSGPLAACSLPALQGPCKAYAPRWAYNSQTGQCQSFVYGGCEGNGNNFE
280 290 300 310 320 330
410 420 430 440 450
pF1KE2 SRESCEDACPVPR-TPPCRACRLRSKLALSLCRSDFAIVGRLTEVLEEPEAAGGIARVAL
:::.::..:: :: . ::::. :.::. :.:::::.:.::..:. :::.. : : :..
CCDS82 SREACEESCPFPRGNQRCRACKPRQKLVTSFCRSDFVILGRVSELTEEPDS--GRALVTV
340 350 360 370 380 390
460 470 480 490 500 510
pF1KE2 EDVLKDDKMGLKFLGTKYLEVTLSGMDWACPCPNMTAGDGPLVIMGEVRDGVAVLDAGSY
..::::.:::::::: . ::::: .::::::::.:... ::.::::: :.:.: :.
CCDS82 DEVLKDEKMGLKFLGQEPLEVTLLHVDWACPCPNVTVSEMPLIIMGEVDGGMAMLRPDSF
400 410 420 430 440 450
520 530 540
pF1KE2 VRAASEKRVKKILELLEKQACELLNRFQD
: :.: .::.:. :...:..:..:..:
CCDS82 VGASSARRVRKLREVMHKKTCDVLKEFLGLH
460 470 480
548 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 17:15:32 2016 done: Tue Nov 8 17:15:33 2016
Total Scan time: 3.720 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]