Result of FASTA (omim) for
pFN21AE2598
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2598, 387 aa
1>>>pF1KE2598 387 - 387 aa - 387 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6340+/-0.000379; mu= 16.2012+/- 0.024
mean_var=84.5426+/-17.199, 0's: 0 Z-trim(113.7): 26 B-trim: 1044 in 1/53
Lambda= 0.139488
statistics sampled from 23084 (23107) to 23084 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.636), E-opt: 0.2 (0.271), width: 16
Scan time: 5.000
The best scores are: opt bits E(85289)
NP_149098 (OMIM: 610920) GTP-binding protein 10 is ( 387) 2521 517.2 2.6e-146
NP_001036182 (OMIM: 610920) GTP-binding protein 10 ( 308) 1525 316.7 4.7e-86
XP_005260450 (OMIM: 610919) PREDICTED: mitochondri ( 406) 485 107.5 5.8e-23
XP_016883295 (OMIM: 610919) PREDICTED: mitochondri ( 406) 485 107.5 5.8e-23
XP_011527078 (OMIM: 610919) PREDICTED: mitochondri ( 406) 485 107.5 5.8e-23
NP_056481 (OMIM: 610919) mitochondrial ribosome-as ( 406) 485 107.5 5.8e-23
XP_006723837 (OMIM: 610919) PREDICTED: mitochondri ( 422) 485 107.5 6e-23
XP_016883294 (OMIM: 610919) PREDICTED: mitochondri ( 434) 485 107.5 6.1e-23
XP_016883297 (OMIM: 610919) PREDICTED: mitochondri ( 332) 301 70.4 6.9e-12
XP_016883296 (OMIM: 610919) PREDICTED: mitochondri ( 360) 301 70.4 7.4e-12
NP_004138 (OMIM: 603952) developmentally-regulated ( 367) 207 51.5 3.7e-06
NP_001317073 (OMIM: 602986) developmentally-regula ( 343) 183 46.7 0.0001
XP_011522006 (OMIM: 602986) PREDICTED: development ( 364) 183 46.7 0.00011
NP_001379 (OMIM: 602986) developmentally-regulated ( 364) 183 46.7 0.00011
XP_005256556 (OMIM: 602986) PREDICTED: development ( 385) 183 46.7 0.00011
>>NP_149098 (OMIM: 610920) GTP-binding protein 10 isofor (387 aa)
initn: 2521 init1: 2521 opt: 2521 Z-score: 2747.8 bits: 517.2 E(85289): 2.6e-146
Smith-Waterman score: 2521; 99.5% identity (99.7% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KE2 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RYPRKRFVAGVGANSKISALKGSKGKDWEIPVPVGISVTDENGKIIGELSKENDRILVAQ
::::::::::::::::::::::::::: :::::::::::::::::::::.::::::::::
NP_149 RYPRKRFVAGVGANSKISALKGSKGKDCEIPVPVGISVTDENGKIIGELNKENDRILVAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GGLGGKLLTNFLPLKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 GGLGGKLLTNFLPLKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 TTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 TTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 LSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 LSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 DFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 DFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLL
310 320 330 340 350 360
370 380
pF1KE2 NLWISDTMSSTEPPSKHAVTTSKMDII
:::::::::::::::::::::::::::
NP_149 NLWISDTMSSTEPPSKHAVTTSKMDII
370 380
>>NP_001036182 (OMIM: 610920) GTP-binding protein 10 iso (308 aa)
initn: 2025 init1: 1506 opt: 1525 Z-score: 1666.0 bits: 316.7 E(85289): 4.7e-86
Smith-Waterman score: 1871; 79.6% identity (79.6% similar) in 387 aa overlap (1-387:1-308)
10 20 30 40 50 60
pF1KE2 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RYPRKRFVAGVGANSKISALKGSKGKDWEIPVPVGISVTDENGKIIGELSKENDRILVAQ
::::::::::::::::
NP_001 RYPRKRFVAGVGANSK--------------------------------------------
70
130 140 150 160 170 180
pF1KE2 GGLGGKLLTNFLPLKGQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAF
:::::::::::::::::::::::::
NP_001 -----------------------------------FPNAGKSSLLSCVSHAKPAIADYAF
80 90 100
190 200 210 220 230 240
pF1KE2 TTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQ
110 120 130 140 150 160
250 260 270 280 290 300
pF1KE2 LSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPK
170 180 190 200 210 220
310 320 330 340 350 360
pF1KE2 DFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLL
230 240 250 260 270 280
370 380
pF1KE2 NLWISDTMSSTEPPSKHAVTTSKMDII
:::::::::::::::::::::::::::
NP_001 NLWISDTMSSTEPPSKHAVTTSKMDII
290 300
>>XP_005260450 (OMIM: 610919) PREDICTED: mitochondrial r (406 aa)
initn: 668 init1: 447 opt: 485 Z-score: 533.2 bits: 107.5 E(85289): 5.8e-23
Smith-Waterman score: 677; 39.5% identity (62.9% similar) in 367 aa overlap (9-350:68-396)
10 20 30
pF1KE2 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGY------
...: :.: :... ::.:: :
XP_005 RASPRLLSVGRADLAKHQELPGKKLLSEKKLKRY--FVDYRRVLVCGGNGGAGASCFHSE
40 50 60 70 80 90
40 50 60 70 80
pF1KE2 PRL------GGEGGKGGDVWV-VAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKG
:: ::.::.:: : . : :. .:... .:: . : .: ..:: : .:
XP_005 PRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRY--QGF-SGEDGGSKNCF--GRSG
100 110 120 130 140 150
90 100 110 120 130
pF1KE2 KDWEIPVPVGISVTDENGKIIGELSKENDRILVAQGGLGGKLLTNFL------PLK----
: :::: ... :.:.....:: .:. ..: :: ::: :: :.
XP_005 AVLYIRVPVG-TLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPG
160 170 180 190 200
140 150 160 170 180 190
pF1KE2 --GQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYS
::.:..::.:: .: .:.:::::::::::: .:.:.::.:.: ::::::..: . :
XP_005 QPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYE
210 220 230 240 250 260
200 210 220 230 240 250
pF1KE2 DFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFET
::.:::.::.:.:::.:.:.: ::.:::: : ::::::.: : ::
XP_005 GHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLS--QPEPWTQ-------
270 280 290 300 310 320
260 270 280 290 300 310
pF1KE2 IILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPE
. : :::.:.. :...: ...::.:::.:: . .:::.. ::
XP_005 VDDLKYELEMYEKGLSARPHAIVANKIDLPEAQAN----LSQLRD-----HLG-------
330 340 350 360
320 330 340 350 360 370
pF1KE2 RTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEP
:..: .::.:::..:.: .. : :. :
XP_005 -----QEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
370 380 390 400
380
pF1KE2 PSKHAVTTSKMDII
>>XP_016883295 (OMIM: 610919) PREDICTED: mitochondrial r (406 aa)
initn: 668 init1: 447 opt: 485 Z-score: 533.2 bits: 107.5 E(85289): 5.8e-23
Smith-Waterman score: 677; 39.5% identity (62.9% similar) in 367 aa overlap (9-350:68-396)
10 20 30
pF1KE2 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGY------
...: :.: :... ::.:: :
XP_016 RASPRLLSVGRADLAKHQELPGKKLLSEKKLKRY--FVDYRRVLVCGGNGGAGASCFHSE
40 50 60 70 80 90
40 50 60 70 80
pF1KE2 PRL------GGEGGKGGDVWV-VAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKG
:: ::.::.:: : . : :. .:... .:: . : .: ..:: : .:
XP_016 PRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRY--QGF-SGEDGGSKNCF--GRSG
100 110 120 130 140 150
90 100 110 120 130
pF1KE2 KDWEIPVPVGISVTDENGKIIGELSKENDRILVAQGGLGGKLLTNFL------PLK----
: :::: ... :.:.....:: .:. ..: :: ::: :: :.
XP_016 AVLYIRVPVG-TLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPG
160 170 180 190 200
140 150 160 170 180 190
pF1KE2 --GQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYS
::.:..::.:: .: .:.:::::::::::: .:.:.::.:.: ::::::..: . :
XP_016 QPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYE
210 220 230 240 250 260
200 210 220 230 240 250
pF1KE2 DFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFET
::.:::.::.:.:::.:.:.: ::.:::: : ::::::.: : ::
XP_016 GHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLS--QPEPWTQ-------
270 280 290 300 310 320
260 270 280 290 300 310
pF1KE2 IILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPE
. : :::.:.. :...: ...::.:::.:: . .:::.. ::
XP_016 VDDLKYELEMYEKGLSARPHAIVANKIDLPEAQAN----LSQLRD-----HLG-------
330 340 350 360
320 330 340 350 360 370
pF1KE2 RTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEP
:..: .::.:::..:.: .. : :. :
XP_016 -----QEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
370 380 390 400
380
pF1KE2 PSKHAVTTSKMDII
>>XP_011527078 (OMIM: 610919) PREDICTED: mitochondrial r (406 aa)
initn: 668 init1: 447 opt: 485 Z-score: 533.2 bits: 107.5 E(85289): 5.8e-23
Smith-Waterman score: 677; 39.5% identity (62.9% similar) in 367 aa overlap (9-350:68-396)
10 20 30
pF1KE2 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGY------
...: :.: :... ::.:: :
XP_011 RASPRLLSVGRADLAKHQELPGKKLLSEKKLKRY--FVDYRRVLVCGGNGGAGASCFHSE
40 50 60 70 80 90
40 50 60 70 80
pF1KE2 PRL------GGEGGKGGDVWV-VAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKG
:: ::.::.:: : . : :. .:... .:: . : .: ..:: : .:
XP_011 PRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRY--QGF-SGEDGGSKNCF--GRSG
100 110 120 130 140 150
90 100 110 120 130
pF1KE2 KDWEIPVPVGISVTDENGKIIGELSKENDRILVAQGGLGGKLLTNFL------PLK----
: :::: ... :.:.....:: .:. ..: :: ::: :: :.
XP_011 AVLYIRVPVG-TLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPG
160 170 180 190 200
140 150 160 170 180 190
pF1KE2 --GQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYS
::.:..::.:: .: .:.:::::::::::: .:.:.::.:.: ::::::..: . :
XP_011 QPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYE
210 220 230 240 250 260
200 210 220 230 240 250
pF1KE2 DFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFET
::.:::.::.:.:::.:.:.: ::.:::: : ::::::.: : ::
XP_011 GHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLS--QPEPWTQ-------
270 280 290 300 310 320
260 270 280 290 300 310
pF1KE2 IILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPE
. : :::.:.. :...: ...::.:::.:: . .:::.. ::
XP_011 VDDLKYELEMYEKGLSARPHAIVANKIDLPEAQAN----LSQLRD-----HLG-------
330 340 350 360
320 330 340 350 360 370
pF1KE2 RTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEP
:..: .::.:::..:.: .. : :. :
XP_011 -----QEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
370 380 390 400
380
pF1KE2 PSKHAVTTSKMDII
>>NP_056481 (OMIM: 610919) mitochondrial ribosome-associ (406 aa)
initn: 668 init1: 447 opt: 485 Z-score: 533.2 bits: 107.5 E(85289): 5.8e-23
Smith-Waterman score: 677; 39.5% identity (62.9% similar) in 367 aa overlap (9-350:68-396)
10 20 30
pF1KE2 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGY------
...: :.: :... ::.:: :
NP_056 RASPRLLSVGRADLAKHQELPGKKLLSEKKLKRY--FVDYRRVLVCGGNGGAGASCFHSE
40 50 60 70 80 90
40 50 60 70 80
pF1KE2 PRL------GGEGGKGGDVWV-VAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKG
:: ::.::.:: : . : :. .:... .:: . : .: ..:: : .:
NP_056 PRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRY--QGF-SGEDGGSKNCF--GRSG
100 110 120 130 140 150
90 100 110 120 130
pF1KE2 KDWEIPVPVGISVTDENGKIIGELSKENDRILVAQGGLGGKLLTNFL------PLK----
: :::: ... :.:.....:: .:. ..: :: ::: :: :.
NP_056 AVLYIRVPVG-TLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPG
160 170 180 190 200
140 150 160 170 180 190
pF1KE2 --GQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYS
::.:..::.:: .: .:.:::::::::::: .:.:.::.:.: ::::::..: . :
NP_056 QPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYE
210 220 230 240 250 260
200 210 220 230 240 250
pF1KE2 DFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFET
::.:::.::.:.:::.:.:.: ::.:::: : ::::::.: : ::
NP_056 GHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLS--QPEPWTQ-------
270 280 290 300 310 320
260 270 280 290 300 310
pF1KE2 IILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPE
. : :::.:.. :...: ...::.:::.:: . .:::.. ::
NP_056 VDDLKYELEMYEKGLSARPHAIVANKIDLPEAQAN----LSQLRD-----HLG-------
330 340 350 360
320 330 340 350 360 370
pF1KE2 RTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEP
:..: .::.:::..:.: .. : :. :
NP_056 -----QEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
370 380 390 400
380
pF1KE2 PSKHAVTTSKMDII
>>XP_006723837 (OMIM: 610919) PREDICTED: mitochondrial r (422 aa)
initn: 668 init1: 447 opt: 485 Z-score: 533.0 bits: 107.5 E(85289): 6e-23
Smith-Waterman score: 677; 39.5% identity (62.9% similar) in 367 aa overlap (9-350:84-412)
10 20 30
pF1KE2 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGY------
...: :.: :... ::.:: :
XP_006 RASPRLLSVGRADLAKHQELPGKKLLSEKKLKRY--FVDYRRVLVCGGNGGAGASCFHSE
60 70 80 90 100 110
40 50 60 70 80
pF1KE2 PRL------GGEGGKGGDVWV-VAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKG
:: ::.::.:: : . : :. .:... .:: . : .: ..:: : .:
XP_006 PRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRY--QGF-SGEDGGSKNCF--GRSG
120 130 140 150 160
90 100 110 120 130
pF1KE2 KDWEIPVPVGISVTDENGKIIGELSKENDRILVAQGGLGGKLLTNFL------PLK----
: :::: ... :.:.....:: .:. ..: :: ::: :: :.
XP_006 AVLYIRVPVG-TLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPG
170 180 190 200 210 220
140 150 160 170 180 190
pF1KE2 --GQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYS
::.:..::.:: .: .:.:::::::::::: .:.:.::.:.: ::::::..: . :
XP_006 QPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYE
230 240 250 260 270 280
200 210 220 230 240 250
pF1KE2 DFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFET
::.:::.::.:.:::.:.:.: ::.:::: : ::::::.: : ::
XP_006 GHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLS--QPEPWTQ-------
290 300 310 320 330
260 270 280 290 300 310
pF1KE2 IILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPE
. : :::.:.. :...: ...::.:::.:: . .:::.. ::
XP_006 VDDLKYELEMYEKGLSARPHAIVANKIDLPEAQAN----LSQLRD-----HLG-------
340 350 360 370 380
320 330 340 350 360 370
pF1KE2 RTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEP
:..: .::.:::..:.: .. : :. :
XP_006 -----QEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
390 400 410 420
380
pF1KE2 PSKHAVTTSKMDII
>>XP_016883294 (OMIM: 610919) PREDICTED: mitochondrial r (434 aa)
initn: 644 init1: 447 opt: 485 Z-score: 532.8 bits: 107.5 E(85289): 6.1e-23
Smith-Waterman score: 677; 39.5% identity (62.9% similar) in 367 aa overlap (9-350:96-424)
10 20 30
pF1KE2 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGY------
...: :.: :... ::.:: :
XP_016 RASPRLLSVGRADLAKHQELPGKKLLSEKKLKRY--FVDYRRVLVCGGNGGAGASCFHSE
70 80 90 100 110 120
40 50 60 70 80
pF1KE2 PRL------GGEGGKGGDVWV-VAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKG
:: ::.::.:: : . : :. .:... .:: . : .: ..:: : .:
XP_016 PRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRY--QGF-SGEDGGSKNCF--GRSG
130 140 150 160 170
90 100 110 120 130
pF1KE2 KDWEIPVPVGISVTDENGKIIGELSKENDRILVAQGGLGGKLLTNFL------PLK----
: :::: ... :.:.....:: .:. ..: :: ::: :: :.
XP_016 AVLYIRVPVG-TLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPG
180 190 200 210 220 230
140 150 160 170 180 190
pF1KE2 --GQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYS
::.:..::.:: .: .:.:::::::::::: .:.:.::.:.: ::::::..: . :
XP_016 QPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYE
240 250 260 270 280 290
200 210 220 230 240 250
pF1KE2 DFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFET
::.:::.::.:.:::.:.:.: ::.:::: : ::::::.: : ::
XP_016 GHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLS--QPEPWTQ-------
300 310 320 330 340
260 270 280 290 300 310
pF1KE2 IILLTKELELYKEELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPE
. : :::.:.. :...: ...::.:::.:: . .:::.. ::
XP_016 VDDLKYELEMYEKGLSARPHAIVANKIDLPEAQAN----LSQLRD-----HLG-------
350 360 370 380 390
320 330 340 350 360 370
pF1KE2 RTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQLLNLWISDTMSSTEP
:..: .::.:::..:.: .. : :. :
XP_016 -----QEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
400 410 420 430
380
pF1KE2 PSKHAVTTSKMDII
>>XP_016883297 (OMIM: 610919) PREDICTED: mitochondrial r (332 aa)
initn: 395 init1: 263 opt: 301 Z-score: 334.4 bits: 70.4 E(85289): 6.9e-12
Smith-Waterman score: 404; 39.4% identity (63.4% similar) in 216 aa overlap (9-199:68-275)
10 20 30
pF1KE2 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGY------
...: :.: :... ::.:: :
XP_016 RASPRLLSVGRADLAKHQELPGKKLLSEKKLKRY--FVDYRRVLVCGGNGGAGASCFHSE
40 50 60 70 80 90
40 50 60 70 80
pF1KE2 PRL------GGEGGKGGDVWV-VAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKG
:: ::.::.:: : . : :. .:... .:: . : .: ..:: : .:
XP_016 PRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRY--QGF-SGEDGGSKNCF--GRSG
100 110 120 130 140 150
90 100 110 120 130
pF1KE2 KDWEIPVPVGISVTDENGKIIGELSKENDRILVAQGGLGGKLLTNFL------PLK----
: :::: ... :.:.....:: .:. ..: :: ::: :: :.
XP_016 AVLYIRVPVG-TLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPG
160 170 180 190 200
140 150 160 170 180 190
pF1KE2 --GQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYS
::.:..::.:: .: .:.:::::::::::: .:.:.::.:.: ::::::..: . :
XP_016 QPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYE
210 220 230 240 250 260
200 210 220 230 240 250
pF1KE2 DFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFET
::.
XP_016 GHLQIAGRTSRILPKWPTSPASYEAPTRTGVWGPPSSGTSSAAAFSCSWWIFLSLSRGLK
270 280 290 300 310 320
>>XP_016883296 (OMIM: 610919) PREDICTED: mitochondrial r (360 aa)
initn: 370 init1: 263 opt: 301 Z-score: 333.9 bits: 70.4 E(85289): 7.4e-12
Smith-Waterman score: 404; 39.4% identity (63.4% similar) in 216 aa overlap (9-199:96-303)
10 20 30
pF1KE2 MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGY------
...: :.: :... ::.:: :
XP_016 RASPRLLSVGRADLAKHQELPGKKLLSEKKLKRY--FVDYRRVLVCGGNGGAGASCFHSE
70 80 90 100 110 120
40 50 60 70 80
pF1KE2 PRL------GGEGGKGGDVWV-VAQNRMTLKQLKDRYPRKRFVAGVGANSKISALKGSKG
:: ::.::.:: : . : :. .:... .:: . : .: ..:: : .:
XP_016 PRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRY--QGF-SGEDGGSKNCF--GRSG
130 140 150 160 170
90 100 110 120 130
pF1KE2 KDWEIPVPVGISVTDENGKIIGELSKENDRILVAQGGLGGKLLTNFL------PLK----
: :::: ... :.:.....:: .:. ..: :: ::: :: :.
XP_016 AVLYIRVPVG-TLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPG
180 190 200 210 220 230
140 150 160 170 180 190
pF1KE2 --GQKRIIHLDLKLIADVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYS
::.:..::.:: .: .:.:::::::::::: .:.:.::.:.: ::::::..: . :
XP_016 QPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYE
240 250 260 270 280 290
200 210 220 230 240 250
pF1KE2 DFKQISVADLPGLIEGAHMNKGMGHKFLKHIERTRQLLFVVDISGFQLSSHTQYRTAFET
::.
XP_016 GHLQIAGRTSRILPKWPTSPASYEAPTRTGVWGPPSSGTSSAAAFSCSWWIFLSLSRGLK
300 310 320 330 340 350
387 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 16:54:10 2016 done: Tue Nov 8 16:54:11 2016
Total Scan time: 5.000 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]