Result of FASTA (omim) for
pFN21AE2568
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2568, 265 aa
1>>>pF1KE2568 265 - 265 aa - 265 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4681+/-0.000363; mu= 13.8330+/- 0.022
mean_var=69.7800+/-14.082, 0's: 0 Z-trim(113.6): 33 B-trim: 184 in 1/50
Lambda= 0.153536
statistics sampled from 22980 (23007) to 22980 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.27), width: 16
Scan time: 4.990
The best scores are: opt bits E(85289)
NP_115587 (OMIM: 607318) lysyl oxidase homolog 4 p ( 756) 1926 435.9 1.1e-121
XP_006718083 (OMIM: 607318) PREDICTED: lysyl oxida ( 757) 1926 435.9 1.1e-121
XP_005270273 (OMIM: 607318) PREDICTED: lysyl oxida ( 757) 1926 435.9 1.1e-121
XP_016860601 (OMIM: 607163) PREDICTED: lysyl oxida ( 392) 1360 310.3 3.4e-84
NP_001276094 (OMIM: 607163) lysyl oxidase homolog ( 392) 1360 310.3 3.4e-84
NP_001276093 (OMIM: 607163) lysyl oxidase homolog ( 608) 1360 310.4 4.9e-84
XP_011531436 (OMIM: 607163) PREDICTED: lysyl oxida ( 753) 1360 310.5 5.8e-84
NP_115992 (OMIM: 607163) lysyl oxidase homolog 3 i ( 753) 1360 310.5 5.8e-84
NP_002309 (OMIM: 606663) lysyl oxidase homolog 2 p ( 774) 1320 301.6 2.8e-81
NP_002308 (OMIM: 153455,617168) protein-lysine 6-o ( 417) 765 178.6 1.7e-44
XP_016877668 (OMIM: 153456,177650) PREDICTED: lysy ( 225) 729 170.4 2.5e-42
NP_005567 (OMIM: 153456,177650) lysyl oxidase homo ( 574) 729 170.7 5.5e-42
NP_001171573 (OMIM: 153455,617168) protein-lysine ( 187) 712 166.6 2.9e-41
NP_001304002 (OMIM: 153455,617168) protein-lysine ( 120) 482 115.6 4.4e-26
>>NP_115587 (OMIM: 607318) lysyl oxidase homolog 4 precu (756 aa)
initn: 1926 init1: 1926 opt: 1926 Z-score: 2305.9 bits: 435.9 E(85289): 1.1e-121
Smith-Waterman score: 1926; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:492-756)
10 20 30
pF1KE2 MSGVRCSGTELALQQCQRHGPVHCSHGGGR
::::::::::::::::::::::::::::::
NP_115 ACRQLGLGFAIHAYKETWFWSGTPRAQEVVMSGVRCSGTELALQQCQRHGPVHCSHGGGR
470 480 490 500 510 520
40 50 60 70 80 90
pF1KE2 FLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 FLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRRL
530 540 550 560 570 580
100 110 120 130 140 150
pF1KE2 LRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 LRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKASF
590 600 610 620 630 640
160 170 180 190 200 210
pF1KE2 CLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 CLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVNP
650 660 670 680 690 700
220 230 240 250 260
pF1KE2 HYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 HYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
710 720 730 740 750
>>XP_006718083 (OMIM: 607318) PREDICTED: lysyl oxidase h (757 aa)
initn: 1926 init1: 1926 opt: 1926 Z-score: 2305.9 bits: 435.9 E(85289): 1.1e-121
Smith-Waterman score: 1926; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:493-757)
10 20 30
pF1KE2 MSGVRCSGTELALQQCQRHGPVHCSHGGGR
::::::::::::::::::::::::::::::
XP_006 ACRQLGLGFAIHAYKETWFWSGTPRAQEVVMSGVRCSGTELALQQCQRHGPVHCSHGGGR
470 480 490 500 510 520
40 50 60 70 80 90
pF1KE2 FLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRRL
530 540 550 560 570 580
100 110 120 130 140 150
pF1KE2 LRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKASF
590 600 610 620 630 640
160 170 180 190 200 210
pF1KE2 CLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVNP
650 660 670 680 690 700
220 230 240 250 260
pF1KE2 HYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
710 720 730 740 750
>>XP_005270273 (OMIM: 607318) PREDICTED: lysyl oxidase h (757 aa)
initn: 1926 init1: 1926 opt: 1926 Z-score: 2305.9 bits: 435.9 E(85289): 1.1e-121
Smith-Waterman score: 1926; 100.0% identity (100.0% similar) in 265 aa overlap (1-265:493-757)
10 20 30
pF1KE2 MSGVRCSGTELALQQCQRHGPVHCSHGGGR
::::::::::::::::::::::::::::::
XP_005 ACRQLGLGFAIHAYKETWFWSGTPRAQEVVMSGVRCSGTELALQQCQRHGPVHCSHGGGR
470 480 490 500 510 520
40 50 60 70 80 90
pF1KE2 FLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRRL
530 540 550 560 570 580
100 110 120 130 140 150
pF1KE2 LRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKASF
590 600 610 620 630 640
160 170 180 190 200 210
pF1KE2 CLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVNP
650 660 670 680 690 700
220 230 240 250 260
pF1KE2 HYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
710 720 730 740 750
>>XP_016860601 (OMIM: 607163) PREDICTED: lysyl oxidase h (392 aa)
initn: 1338 init1: 1238 opt: 1360 Z-score: 1632.6 bits: 310.3 E(85289): 3.4e-84
Smith-Waterman score: 1360; 65.8% identity (85.7% similar) in 266 aa overlap (1-265:126-391)
10 20
pF1KE2 MSGVRCSGTELALQQCQRHGP-VHCSHGGG
::::::.::::.:.:: .:: . :.. :
XP_016 VACRQLGLGYANHGLQETWYWDSGNITEVVMSGVRCTGTELSLDQCAHHGTHITCKRTGT
100 110 120 130 140 150
30 40 50 60 70 80
pF1KE2 RFLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRR
:: ::: : ..: ::.... :::::::.::::: .:::: :::::..:: .::::.::
XP_016 RFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEENCLASSARSANWPYGHRR
160 170 180 190 200 210
90 100 110 120 130 140
pF1KE2 LLRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKAS
:::::.::.::::.:::::.:: :::::.:: ::::...:::::.:: ::.:::::::::
XP_016 LLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTHYDILTPNGTKVAEGHKAS
220 230 240 250 260 270
150 160 170 180 190 200
pF1KE2 FCLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVN
::::::.: ...:: ::::::::.:::::: :::::::::.::::: :::::.::..:
XP_016 FCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVIN
280 290 300 310 320 330
210 220 230 240 250 260
pF1KE2 PHYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
:..:::::::.:: ..: :::::::.:.:::: :... .:. .:. .: :
XP_016 PNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEANRRFERYPGQTSNQII
340 350 360 370 380 390
>>NP_001276094 (OMIM: 607163) lysyl oxidase homolog 3 is (392 aa)
initn: 1338 init1: 1238 opt: 1360 Z-score: 1632.6 bits: 310.3 E(85289): 3.4e-84
Smith-Waterman score: 1360; 65.8% identity (85.7% similar) in 266 aa overlap (1-265:126-391)
10 20
pF1KE2 MSGVRCSGTELALQQCQRHGP-VHCSHGGG
::::::.::::.:.:: .:: . :.. :
NP_001 VACRQLGLGYANHGLQETWYWDSGNITEVVMSGVRCTGTELSLDQCAHHGTHITCKRTGT
100 110 120 130 140 150
30 40 50 60 70 80
pF1KE2 RFLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRR
:: ::: : ..: ::.... :::::::.::::: .:::: :::::..:: .::::.::
NP_001 RFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEENCLASSARSANWPYGHRR
160 170 180 190 200 210
90 100 110 120 130 140
pF1KE2 LLRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKAS
:::::.::.::::.:::::.:: :::::.:: ::::...:::::.:: ::.:::::::::
NP_001 LLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTHYDILTPNGTKVAEGHKAS
220 230 240 250 260 270
150 160 170 180 190 200
pF1KE2 FCLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVN
::::::.: ...:: ::::::::.:::::: :::::::::.::::: :::::.::..:
NP_001 FCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVIN
280 290 300 310 320 330
210 220 230 240 250 260
pF1KE2 PHYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
:..:::::::.:: ..: :::::::.:.:::: :... .:. .:. .: :
NP_001 PNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEANRRFERYPGQTSNQII
340 350 360 370 380 390
>>NP_001276093 (OMIM: 607163) lysyl oxidase homolog 3 is (608 aa)
initn: 1338 init1: 1238 opt: 1360 Z-score: 1629.8 bits: 310.4 E(85289): 4.9e-84
Smith-Waterman score: 1360; 65.8% identity (85.7% similar) in 266 aa overlap (1-265:342-607)
10 20
pF1KE2 MSGVRCSGTELALQQCQRHGP-VHCSHGGG
::::::.::::.:.:: .:: . :.. :
NP_001 VACRQLGLGYANHGLQETWYWDSGNITEVVMSGVRCTGTELSLDQCAHHGTHITCKRTGT
320 330 340 350 360 370
30 40 50 60 70 80
pF1KE2 RFLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRR
:: ::: : ..: ::.... :::::::.::::: .:::: :::::..:: .::::.::
NP_001 RFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEENCLASSARSANWPYGHRR
380 390 400 410 420 430
90 100 110 120 130 140
pF1KE2 LLRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKAS
:::::.::.::::.:::::.:: :::::.:: ::::...:::::.:: ::.:::::::::
NP_001 LLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTHYDILTPNGTKVAEGHKAS
440 450 460 470 480 490
150 160 170 180 190 200
pF1KE2 FCLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVN
::::::.: ...:: ::::::::.:::::: :::::::::.::::: :::::.::..:
NP_001 FCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVIN
500 510 520 530 540 550
210 220 230 240 250 260
pF1KE2 PHYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
:..:::::::.:: ..: :::::::.:.:::: :... .:. .:. .: :
NP_001 PNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEANRRFERYPGQTSNQII
560 570 580 590 600
>>XP_011531436 (OMIM: 607163) PREDICTED: lysyl oxidase h (753 aa)
initn: 1374 init1: 1238 opt: 1360 Z-score: 1628.4 bits: 310.5 E(85289): 5.8e-84
Smith-Waterman score: 1360; 65.8% identity (85.7% similar) in 266 aa overlap (1-265:487-752)
10 20
pF1KE2 MSGVRCSGTELALQQCQRHGP-VHCSHGGG
::::::.::::.:.:: .:: . :.. :
XP_011 VACRQLGLGYANHGLQETWYWDSGNITEVVMSGVRCTGTELSLDQCAHHGTHITCKRTGT
460 470 480 490 500 510
30 40 50 60 70 80
pF1KE2 RFLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRR
:: ::: : ..: ::.... :::::::.::::: .:::: :::::..:: .::::.::
XP_011 RFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEENCLASSARSANWPYGHRR
520 530 540 550 560 570
90 100 110 120 130 140
pF1KE2 LLRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKAS
:::::.::.::::.:::::.:: :::::.:: ::::...:::::.:: ::.:::::::::
XP_011 LLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTHYDILTPNGTKVAEGHKAS
580 590 600 610 620 630
150 160 170 180 190 200
pF1KE2 FCLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVN
::::::.: ...:: ::::::::.:::::: :::::::::.::::: :::::.::..:
XP_011 FCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVIN
640 650 660 670 680 690
210 220 230 240 250 260
pF1KE2 PHYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
:..:::::::.:: ..: :::::::.:.:::: :... .:. .:. .: :
XP_011 PNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEANRRFERYPGQTSNQII
700 710 720 730 740 750
>>NP_115992 (OMIM: 607163) lysyl oxidase homolog 3 isofo (753 aa)
initn: 1374 init1: 1238 opt: 1360 Z-score: 1628.4 bits: 310.5 E(85289): 5.8e-84
Smith-Waterman score: 1360; 65.8% identity (85.7% similar) in 266 aa overlap (1-265:487-752)
10 20
pF1KE2 MSGVRCSGTELALQQCQRHGP-VHCSHGGG
::::::.::::.:.:: .:: . :.. :
NP_115 VACRQLGLGYANHGLQETWYWDSGNITEVVMSGVRCTGTELSLDQCAHHGTHITCKRTGT
460 470 480 490 500 510
30 40 50 60 70 80
pF1KE2 RFLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRR
:: ::: : ..: ::.... :::::::.::::: .:::: :::::..:: .::::.::
NP_115 RFTAGVICSETASDLLLHSALVQETAYIEDRPLHMLYCAAEENCLASSARSANWPYGHRR
520 530 540 550 560 570
90 100 110 120 130 140
pF1KE2 LLRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKAS
:::::.::.::::.:::::.:: :::::.:: ::::...:::::.:: ::.:::::::::
NP_115 LLRFSSQIHNLGRADFRPKAGRHSWVWHECHGHYHSMDIFTHYDILTPNGTKVAEGHKAS
580 590 600 610 620 630
150 160 170 180 190 200
pF1KE2 FCLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVN
::::::.: ...:: ::::::::.:::::: :::::::::.::::: :::::.::..:
NP_115 FCLEDTECQEDVSKRYECANFGEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVIN
640 650 660 670 680 690
210 220 230 240 250 260
pF1KE2 PHYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
:..:::::::.:: ..: :::::::.:.:::: :... .:. .:. .: :
NP_115 PNFEVAESDFTNNAMKCNCKYDGHRIWVHNCHIGDAFSEEANRRFERYPGQTSNQII
700 710 720 730 740 750
>>NP_002309 (OMIM: 606663) lysyl oxidase homolog 2 precu (774 aa)
initn: 1269 init1: 1236 opt: 1320 Z-score: 1580.3 bits: 301.6 E(85289): 2.8e-81
Smith-Waterman score: 1320; 64.8% identity (86.7% similar) in 264 aa overlap (1-263:506-769)
10 20
pF1KE2 MSGVRCSGTELALQQCQRHGP-VHCSHGGG
::::.::::::.: .:.. : : : .::
NP_002 VCRQLGLGFASNAFQETWYWHGDVNSNKVVMSGVKCSGTELSLAHCRHDGEDVACPQGGV
480 490 500 510 520 530
30 40 50 60 70 80
pF1KE2 RFLAGVSCMDSAPDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMDWPYGYRR
.. :::.: ..:::::.::..::.:.::::::. .: :: :::::: :: . : ::::
NP_002 QYGAGVACSETAPDLVLNAEMVQQTTYLEDRPMFMLQCAMEENCLSASAAQTDPTTGYRR
540 550 560 570 580 590
90 100 110 120 130 140
pF1KE2 LLRFSTQIYNLGRTDFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKAS
:::::.::.: :..:::::.:: .:.::.:::::::.:::::::::.:::.:::::::::
NP_002 LLRFSSQIHNNGQSDFRPKNGRHAWIWHDCHRHYHSMEVFTHYDLLNLNGTKVAEGHKAS
600 610 620 630 640 650
150 160 170 180 190 200
pF1KE2 FCLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVN
::::::.: .:. : :::::.::.:.:::: ::::::::::::::: ::.:.:::..:
NP_002 FCLEDTECEGDIQKNYECANFGDQGITMGCWDMYRHDIDCQWVDITDVPPGDYLFQVVIN
660 670 680 690 700 710
210 220 230 240 250 260
pF1KE2 PHYEVAESDFSNNMLQCRCKYDGHRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
:..::::::.:::...:: .:::::.:..::: :.:. ..: ..:. . : ::
NP_002 PNFEVAESDYSNNIMKCRSRYDGHRIWMYNCHIGGSFSEETEKKFEHFSGLLNNQLSPQ
720 730 740 750 760 770
>>NP_002308 (OMIM: 153455,617168) protein-lysine 6-oxida (417 aa)
initn: 725 init1: 485 opt: 765 Z-score: 920.0 bits: 178.6 E(85289): 1.7e-44
Smith-Waterman score: 765; 49.5% identity (71.6% similar) in 218 aa overlap (28-240:196-412)
10 20 30 40 50
pF1KE2 MSGVRCSGTELALQQCQRHGPVHCSHGGGRFLAGVSC---MDSAPDLVMNAQLVQET
:::. : . . . :::: . .: .
NP_002 MVGDDPYNPYKYSDDNPYYNYYDTYERPRPGGRYRPGYGTGYFQYGLPDLVADPYYIQAS
170 180 190 200 210 220
60 70 80 90 100 110
pF1KE2 AYLEDRPLSQLYCAHEENCLSKSADHMDW-PYGYRRLLRFSTQIYNLGRTDFRPKTGRDS
.:.. . .: :: :::::...: . : : .: :::: .. : : .:: :. : :
NP_002 TYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFPQRVKNQGTSDFLPSRPRYS
230 240 250 260 270 280
120 130 140 150 160 170
pF1KE2 WVWHQCHRHYHSIEVFTHYDLLTLNGSK-VAEGHKASFCLEDTNCPTGLQRRYACANFGE
: ::.::.::::.. :.::::: : .. ::::::::::::::.: : .::.::.
NP_002 WEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLEDTSCDYGYHRRFACTAH-T
290 300 310 320 330 340
180 190 200 210 220 230
pF1KE2 QGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVNPHYEVAESDFSNNMLQCRCKYDG
::.. ::.::: ::::::.::::: :::::..: ::: : : :::..::...: .: :
NP_002 QGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLVPESDYTNNVVRCDIRYTG
350 360 370 380 390 400
240 250 260
pF1KE2 HRVWLHNCHTGNSYPANAELSLEQEQRLRNNLI
:... .:
NP_002 HHAYASGCTISPY
410
265 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 16:25:20 2016 done: Tue Nov 8 16:25:20 2016
Total Scan time: 4.990 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]