Result of FASTA (omim) for
pFN21AE2511
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2511, 278 aa
1>>>pF1KE2511 278 - 278 aa - 278 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.0339+/-0.000339; mu= -4.4947+/- 0.021
mean_var=311.7557+/-62.827, 0's: 0 Z-trim(124.6): 57 B-trim: 79 in 1/60
Lambda= 0.072639
statistics sampled from 46448 (46548) to 46448 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.82), E-opt: 0.2 (0.546), width: 16
Scan time: 8.870
The best scores are: opt bits E(85289)
NP_003274 (OMIM: 191041,605355) troponin T, slow s ( 278) 1844 205.7 7.7e-53
XP_016882675 (OMIM: 191041,605355) PREDICTED: trop ( 262) 1337 152.6 7.2e-37
NP_001119604 (OMIM: 191041,605355) troponin T, slo ( 262) 1337 152.6 7.2e-37
XP_011525548 (OMIM: 191041,605355) PREDICTED: trop ( 258) 1244 142.8 6.2e-34
XP_016882676 (OMIM: 191041,605355) PREDICTED: trop ( 258) 1244 142.8 6.2e-34
NP_001278703 (OMIM: 191041,605355) troponin T, slo ( 251) 1150 133.0 5.6e-31
NP_001119605 (OMIM: 191041,605355) troponin T, slo ( 251) 1150 133.0 5.6e-31
XP_016873697 (OMIM: 600692,601680) PREDICTED: trop ( 262) 878 104.5 2.2e-22
XP_006718357 (OMIM: 600692,601680) PREDICTED: trop ( 261) 873 104.0 3.1e-22
NP_006748 (OMIM: 600692,601680) troponin T, fast s ( 258) 872 103.9 3.3e-22
XP_006718356 (OMIM: 600692,601680) PREDICTED: trop ( 261) 871 103.7 3.6e-22
XP_016873695 (OMIM: 600692,601680) PREDICTED: trop ( 269) 868 103.4 4.6e-22
XP_011518645 (OMIM: 600692,601680) PREDICTED: trop ( 269) 868 103.4 4.6e-22
XP_006718353 (OMIM: 600692,601680) PREDICTED: trop ( 269) 868 103.4 4.6e-22
XP_016873705 (OMIM: 600692,601680) PREDICTED: trop ( 263) 866 103.2 5.2e-22
XP_016873696 (OMIM: 600692,601680) PREDICTED: trop ( 265) 863 102.9 6.6e-22
XP_016873698 (OMIM: 600692,601680) PREDICTED: trop ( 257) 862 102.8 6.9e-22
XP_006718359 (OMIM: 600692,601680) PREDICTED: trop ( 257) 862 102.8 6.9e-22
XP_016873694 (OMIM: 600692,601680) PREDICTED: trop ( 256) 859 102.5 8.6e-22
NP_001036246 (OMIM: 600692,601680) troponin T, fas ( 256) 857 102.3 9.9e-22
XP_016873700 (OMIM: 600692,601680) PREDICTED: trop ( 252) 851 101.6 1.5e-21
XP_016873699 (OMIM: 600692,601680) PREDICTED: trop ( 254) 851 101.6 1.5e-21
XP_016873706 (OMIM: 600692,601680) PREDICTED: trop ( 256) 850 101.5 1.6e-21
XP_016873707 (OMIM: 600692,601680) PREDICTED: trop ( 252) 841 100.6 3.1e-21
XP_016873702 (OMIM: 600692,601680) PREDICTED: trop ( 246) 835 100.0 4.8e-21
XP_016873701 (OMIM: 600692,601680) PREDICTED: trop ( 251) 833 99.8 5.6e-21
NP_001036245 (OMIM: 600692,601680) troponin T, fas ( 250) 832 99.6 6e-21
NP_001001431 (OMIM: 115195,191045,601494,612422) t ( 285) 833 99.8 6.1e-21
XP_016857706 (OMIM: 115195,191045,601494,612422) P ( 285) 833 99.8 6.1e-21
NP_000355 (OMIM: 115195,191045,601494,612422) trop ( 295) 833 99.8 6.3e-21
NP_001036247 (OMIM: 600692,601680) troponin T, fas ( 250) 830 99.4 6.9e-21
NP_001284575 (OMIM: 600692,601680) troponin T, fas ( 250) 830 99.4 6.9e-21
XP_016873703 (OMIM: 600692,601680) PREDICTED: trop ( 245) 829 99.3 7.3e-21
XP_006718362 (OMIM: 600692,601680) PREDICTED: trop ( 249) 828 99.2 8e-21
XP_006718363 (OMIM: 600692,601680) PREDICTED: trop ( 245) 827 99.1 8.5e-21
NP_001001432 (OMIM: 115195,191045,601494,612422) t ( 282) 824 98.9 1.2e-20
XP_016857705 (OMIM: 115195,191045,601494,612422) P ( 287) 824 98.9 1.2e-20
XP_011508242 (OMIM: 115195,191045,601494,612422) P ( 297) 824 98.9 1.2e-20
XP_011508243 (OMIM: 115195,191045,601494,612422) P ( 296) 821 98.6 1.5e-20
XP_016873704 (OMIM: 600692,601680) PREDICTED: trop ( 243) 816 98.0 1.9e-20
XP_011508245 (OMIM: 115195,191045,601494,612422) P ( 283) 817 98.1 1.9e-20
XP_011508244 (OMIM: 115195,191045,601494,612422) P ( 283) 817 98.1 1.9e-20
NP_001263276 (OMIM: 115195,191045,601494,612422) t ( 288) 817 98.1 2e-20
XP_006711571 (OMIM: 115195,191045,601494,612422) P ( 288) 817 98.1 2e-20
NP_001001430 (OMIM: 115195,191045,601494,612422) t ( 288) 817 98.1 2e-20
NP_001263274 (OMIM: 115195,191045,601494,612422) t ( 298) 817 98.1 2e-20
XP_011508240 (OMIM: 115195,191045,601494,612422) P ( 298) 817 98.1 2e-20
XP_011508246 (OMIM: 115195,191045,601494,612422) P ( 282) 814 97.8 2.4e-20
XP_006711572 (OMIM: 115195,191045,601494,612422) P ( 287) 814 97.8 2.4e-20
XP_016873708 (OMIM: 600692,601680) PREDICTED: trop ( 239) 812 97.5 2.5e-20
>>NP_003274 (OMIM: 191041,605355) troponin T, slow skele (278 aa)
initn: 1844 init1: 1844 opt: 1844 Z-score: 1069.7 bits: 205.7 E(85289): 7.7e-53
Smith-Waterman score: 1844; 100.0% identity (100.0% similar) in 278 aa overlap (1-278:1-278)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
190 200 210 220 230 240
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
::::::::::::::::::::::::::::::::::::::
NP_003 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
250 260 270
>>XP_016882675 (OMIM: 191041,605355) PREDICTED: troponin (262 aa)
initn: 1411 init1: 1333 opt: 1337 Z-score: 782.8 bits: 152.6 E(85289): 7.2e-37
Smith-Waterman score: 1678; 94.2% identity (94.2% similar) in 278 aa overlap (1-278:1-262)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:::::::::::::::::::::::: ::::::::::::::::::::
XP_016 MKVRILSERKKPLDIDYMGEEQLR----------------EKAQELSDWIHQLESEKFDL
190 200 210 220
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
::::::::::::::::::::::::::::::::::::::
XP_016 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
230 240 250 260
>>NP_001119604 (OMIM: 191041,605355) troponin T, slow sk (262 aa)
initn: 1411 init1: 1333 opt: 1337 Z-score: 782.8 bits: 152.6 E(85289): 7.2e-37
Smith-Waterman score: 1678; 94.2% identity (94.2% similar) in 278 aa overlap (1-278:1-262)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:::::::::::::::::::::::: ::::::::::::::::::::
NP_001 MKVRILSERKKPLDIDYMGEEQLR----------------EKAQELSDWIHQLESEKFDL
190 200 210 220
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
::::::::::::::::::::::::::::::::::::::
NP_001 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
230 240 250 260
>>XP_011525548 (OMIM: 191041,605355) PREDICTED: troponin (258 aa)
initn: 1296 init1: 1135 opt: 1244 Z-score: 730.3 bits: 142.8 E(85289): 6.2e-34
Smith-Waterman score: 1585; 91.0% identity (92.1% similar) in 278 aa overlap (1-278:1-258)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::::::::::::::::::::::::. : :. . :::::::::::::::::::::::::
XP_011 MSDTEEQEYEEEQPEEEAAEEEEEG-EVPDSA---EEERPKPSRPVVPPLIPPKIPEGER
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:::::::::::::::::::::::: ::::::::::::::::::::
XP_011 MKVRILSERKKPLDIDYMGEEQLR----------------EKAQELSDWIHQLESEKFDL
180 190 200 210 220
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
::::::::::::::::::::::::::::::::::::::
XP_011 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
230 240 250
>>XP_016882676 (OMIM: 191041,605355) PREDICTED: troponin (258 aa)
initn: 1296 init1: 1135 opt: 1244 Z-score: 730.3 bits: 142.8 E(85289): 6.2e-34
Smith-Waterman score: 1585; 91.0% identity (92.1% similar) in 278 aa overlap (1-278:1-258)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::::::::::::::::::::::::. : :. . :::::::::::::::::::::::::
XP_016 MSDTEEQEYEEEQPEEEAAEEEEEG-EVPDSA---EEERPKPSRPVVPPLIPPKIPEGER
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:::::::::::::::::::::::: ::::::::::::::::::::
XP_016 MKVRILSERKKPLDIDYMGEEQLR----------------EKAQELSDWIHQLESEKFDL
180 190 200 210 220
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
::::::::::::::::::::::::::::::::::::::
XP_016 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
230 240 250
>>NP_001278703 (OMIM: 191041,605355) troponin T, slow sk (251 aa)
initn: 1367 init1: 1139 opt: 1150 Z-score: 677.2 bits: 133.0 E(85289): 5.6e-31
Smith-Waterman score: 1567; 90.3% identity (90.3% similar) in 278 aa overlap (1-278:1-251)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
:::::::::::::::::::::::: :::::::::::::::::::::::::
NP_001 MSDTEEQEYEEEQPEEEAAEEEEE-----------EEERPKPSRPVVPPLIPPKIPEGER
10 20 30 40
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:::::::::::::::::::::::: ::::::::::::::::::::
NP_001 MKVRILSERKKPLDIDYMGEEQLR----------------EKAQELSDWIHQLESEKFDL
170 180 190 200 210
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
::::::::::::::::::::::::::::::::::::::
NP_001 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
220 230 240 250
>>NP_001119605 (OMIM: 191041,605355) troponin T, slow sk (251 aa)
initn: 1367 init1: 1139 opt: 1150 Z-score: 677.2 bits: 133.0 E(85289): 5.6e-31
Smith-Waterman score: 1567; 90.3% identity (90.3% similar) in 278 aa overlap (1-278:1-251)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
:::::::::::::::::::::::: :::::::::::::::::::::::::
NP_001 MSDTEEQEYEEEQPEEEAAEEEEE-----------EEERPKPSRPVVPPLIPPKIPEGER
10 20 30 40
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:::::::::::::::::::::::: ::::::::::::::::::::
NP_001 MKVRILSERKKPLDIDYMGEEQLR----------------EKAQELSDWIHQLESEKFDL
170 180 190 200 210
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
::::::::::::::::::::::::::::::::::::::
NP_001 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
220 230 240 250
>>XP_016873697 (OMIM: 600692,601680) PREDICTED: troponin (262 aa)
initn: 970 init1: 817 opt: 878 Z-score: 522.9 bits: 104.5 E(85289): 2.2e-22
Smith-Waterman score: 1040; 60.3% identity (80.1% similar) in 282 aa overlap (1-278:1-262)
10 20 30 40 50
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEE-PEPVAEPEEERPKPSRPVVPPLIPPKIPEGE
::: : .. ::. ::: :.:: . ::: : .:: . :. :: : : :::::::
XP_016 MSDEEVEQVEEQYEEEEEAQEEVHEPEEVQEDTAEEDAEEEKPR----PKLTAPKIPEGE
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 RVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTE
.::::::..::..:::.:::.::: ::: ::::::::::::::::.::.:::::::.:.:
XP_016 KVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 KERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGR
:::::: .::::: :.:::.::.::::: ::::.::.:::....::.::.:::::.::.:
XP_016 KERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 EMKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFD
::: .::.::.:::.::..::..:: .::.:: . .:::: .::.
XP_016 EMKKKILAERRKPLNIDHLGEDKLR----------------DKAKELWETLHQLEIDKFE
180 190 200 210 220
240 250 260 270
pF1KE2 LMAKLKQQKYEINVLYNRISHAQKFRKGAG---KGRVGGRWK
. :::.:::.:..: .::..::: : :: ::.::::::
XP_016 FGEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
230 240 250 260
>>XP_006718357 (OMIM: 600692,601680) PREDICTED: troponin (261 aa)
initn: 946 init1: 780 opt: 873 Z-score: 520.1 bits: 104.0 E(85289): 3.1e-22
Smith-Waterman score: 1013; 59.7% identity (77.7% similar) in 283 aa overlap (1-278:1-261)
10 20 30 40 50
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEE--ERPKPSRPVVPPLIPPKIPEG
::: : .. ::. ::: : .::: : : : :::: :. :: : : ::::::
XP_006 MSDEEVEQVEEQYEEEE--EAQEEAAEVHEEVHEPEEVQEEEKPR----PKLTAPKIPEG
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 ERVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRT
:.::::::..::..:::.:::.::: ::: ::::::::::::::::.::.:::::::.:.
XP_006 EKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 EKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTG
::::::: .::::: :.:::.::.::::: ::::.::.:::....::.::.:::::.::.
XP_006 EKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 REMKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKF
:::: .::.::.:::.::..::..:: .::.:: . .:::: .::
XP_006 REMKKKILAERRKPLNIDHLGEDKLR----------------DKAKELWETLHQLEIDKF
180 190 200 210
240 250 260 270
pF1KE2 DLMAKLKQQKYEINVLYNRISHAQKFRKGAG---KGRVGGRWK
.. :::.:::.: . :.. :: : :: ::.::::::
XP_006 EFGEKLKRQKYDIMNVRARVQMLAKFSKKAGTPAKGKVGGRWK
220 230 240 250 260
>>NP_006748 (OMIM: 600692,601680) troponin T, fast skele (258 aa)
initn: 1047 init1: 824 opt: 872 Z-score: 519.6 bits: 103.9 E(85289): 3.3e-22
Smith-Waterman score: 1034; 59.8% identity (80.4% similar) in 281 aa overlap (1-278:1-258)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::: : .. ::. ::: :.::::. :. . :::.:.:. : :::::::.
NP_006 MSDEEVEQVEEQYEEEEEAQEEEEVQEDTAE-EDAEEEKPRPK------LTAPKIPEGEK
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::..::..:::.:::.::: ::: ::::::::::::::::.::.:::::::.:.::
NP_006 VDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::: .::::: :.:::.::.::::: ::::.::.:::....::.::.:::::.::.::
NP_006 ERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTARE
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:: .::.::.:::.::..::..:: .::.:: . .:::: .::..
NP_006 MKKKILAERRKPLNIDHLGEDKLR----------------DKAKELWETLHQLEIDKFEF
180 190 200 210
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAG---KGRVGGRWK
:::.:::.:..: .::..::: : :: ::.::::::
NP_006 GEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
220 230 240 250
278 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 02:47:40 2016 done: Tue Nov 8 02:47:41 2016
Total Scan time: 8.870 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]