Result of FASTA (ccds) for
pFN21AE2511
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2511, 278 aa
1>>>pF1KE2511 278 - 278 aa - 278 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.7709+/-0.000852; mu= -2.5461+/- 0.052
mean_var=283.6608+/-56.340, 0's: 0 Z-trim(116.6): 35 B-trim: 15 in 1/54
Lambda= 0.076151
statistics sampled from 17151 (17186) to 17151 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.812), E-opt: 0.2 (0.528), width: 16
Scan time: 2.930
The best scores are: opt bits E(32554)
CCDS12917.1 TNNT1 gene_id:7138|Hs108|chr19 ( 278) 1844 214.8 5.4e-56
CCDS59421.1 TNNT1 gene_id:7138|Hs108|chr19 ( 262) 1337 159.1 3e-39
CCDS46185.1 TNNT1 gene_id:7138|Hs108|chr19 ( 251) 1150 138.5 4.5e-33
CCDS7727.1 TNNT3 gene_id:7140|Hs108|chr11 ( 258) 872 108.0 7.2e-24
CCDS41594.1 TNNT3 gene_id:7140|Hs108|chr11 ( 256) 857 106.4 2.2e-23
CCDS41595.1 TNNT3 gene_id:7140|Hs108|chr11 ( 250) 832 103.6 1.5e-22
CCDS30968.1 TNNT2 gene_id:7139|Hs108|chr1 ( 285) 833 103.8 1.5e-22
CCDS41596.1 TNNT3 gene_id:7140|Hs108|chr11 ( 250) 830 103.4 1.7e-22
CCDS73002.1 TNNT2 gene_id:7139|Hs108|chr1 ( 282) 824 102.8 3e-22
CCDS30969.1 TNNT2 gene_id:7139|Hs108|chr1 ( 288) 817 102.0 5.1e-22
CCDS73003.1 TNNT2 gene_id:7139|Hs108|chr1 ( 298) 817 102.0 5.3e-22
CCDS60390.1 TNNT2 gene_id:7139|Hs108|chr1 ( 255) 492 66.3 2.6e-11
>>CCDS12917.1 TNNT1 gene_id:7138|Hs108|chr19 (278 aa)
initn: 1844 init1: 1844 opt: 1844 Z-score: 1118.7 bits: 214.8 E(32554): 5.4e-56
Smith-Waterman score: 1844; 100.0% identity (100.0% similar) in 278 aa overlap (1-278:1-278)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
190 200 210 220 230 240
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
::::::::::::::::::::::::::::::::::::::
CCDS12 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
250 260 270
>>CCDS59421.1 TNNT1 gene_id:7138|Hs108|chr19 (262 aa)
initn: 1411 init1: 1333 opt: 1337 Z-score: 818.0 bits: 159.1 E(32554): 3e-39
Smith-Waterman score: 1678; 94.2% identity (94.2% similar) in 278 aa overlap (1-278:1-262)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:::::::::::::::::::::::: ::::::::::::::::::::
CCDS59 MKVRILSERKKPLDIDYMGEEQLR----------------EKAQELSDWIHQLESEKFDL
190 200 210 220
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
::::::::::::::::::::::::::::::::::::::
CCDS59 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
230 240 250 260
>>CCDS46185.1 TNNT1 gene_id:7138|Hs108|chr19 (251 aa)
initn: 1367 init1: 1139 opt: 1150 Z-score: 707.2 bits: 138.5 E(32554): 4.5e-33
Smith-Waterman score: 1567; 90.3% identity (90.3% similar) in 278 aa overlap (1-278:1-251)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
:::::::::::::::::::::::: :::::::::::::::::::::::::
CCDS46 MSDTEEQEYEEEQPEEEAAEEEEE-----------EEERPKPSRPVVPPLIPPKIPEGER
10 20 30 40
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:::::::::::::::::::::::: ::::::::::::::::::::
CCDS46 MKVRILSERKKPLDIDYMGEEQLR----------------EKAQELSDWIHQLESEKFDL
170 180 190 200 210
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
::::::::::::::::::::::::::::::::::::::
CCDS46 MAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
220 230 240 250
>>CCDS7727.1 TNNT3 gene_id:7140|Hs108|chr11 (258 aa)
initn: 1047 init1: 824 opt: 872 Z-score: 542.0 bits: 108.0 E(32554): 7.2e-24
Smith-Waterman score: 1034; 59.8% identity (80.4% similar) in 281 aa overlap (1-278:1-258)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::: : .. ::. ::: :.::::. :. . :::.:.:. : :::::::.
CCDS77 MSDEEVEQVEEQYEEEEEAQEEEEVQEDTAE-EDAEEEKPRPK------LTAPKIPEGEK
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::..::..:::.:::.::: ::: ::::::::::::::::.::.:::::::.:.::
CCDS77 VDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::: .::::: :.:::.::.::::: ::::.::.:::....::.::.:::::.::.::
CCDS77 ERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTARE
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:: .::.::.:::.::..::..:: .::.:: . .:::: .::..
CCDS77 MKKKILAERRKPLNIDHLGEDKLR----------------DKAKELWETLHQLEIDKFEF
180 190 200 210
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAG---KGRVGGRWK
:::.:::.:..: .::..::: : :: ::.::::::
CCDS77 GEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
220 230 240 250
>>CCDS41594.1 TNNT3 gene_id:7140|Hs108|chr11 (256 aa)
initn: 951 init1: 816 opt: 857 Z-score: 533.2 bits: 106.4 E(32554): 2.2e-23
Smith-Waterman score: 1028; 60.5% identity (80.1% similar) in 281 aa overlap (1-278:1-256)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::: : .. ::. ::: : .::: : : : :::: .:.:. : :::::::.
CCDS41 MSDEEVEQVEEQYEEEE--EAQEEAAEVHEEVHEPEE-KPRPK------LTAPKIPEGEK
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::..::..:::.:::.::: ::: ::::::::::::::::.::.:::::::.:.::
CCDS41 VDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::: .::::: :.:::.::.::::: ::::.::.:::....::.::.:::::.::.::
CCDS41 ERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTARE
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:: .::.::.:::.::..::..:: .::.:: . .:::: .::..
CCDS41 MKKKILAERRKPLNIDHLGEDKLR----------------DKAKELWETLHQLEIDKFEF
180 190 200 210
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAG---KGRVGGRWK
:::.:::.:..: .::..::: : :: ::.::::::
CCDS41 GEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
220 230 240 250
>>CCDS41595.1 TNNT3 gene_id:7140|Hs108|chr11 (250 aa)
initn: 988 init1: 787 opt: 832 Z-score: 518.5 bits: 103.6 E(32554): 1.5e-22
Smith-Waterman score: 994; 58.7% identity (77.2% similar) in 281 aa overlap (1-278:1-250)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::: : .. ::. ::: :.::::. :: .: ::: : :::::::.
CCDS41 MSDEEVEQVEEQYEEEEEAQEEEEVQEEEKP-------RPK--------LTAPKIPEGEK
10 20 30 40
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::..::..:::.:::.::: ::: ::::::::::::::::.::.:::::::.:.::
CCDS41 VDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::: .::::: :.:::.::.::::: ::::.::.:::....::.::.:::::.::.::
CCDS41 ERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTARE
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:: .::.::.:::.::..::..:: .::.:: . .:::: .::..
CCDS41 MKKKILAERRKPLNIDHLGEDKLR----------------DKAKELWETLHQLEIDKFEF
170 180 190 200
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAG---KGRVGGRWK
:::.:::.: . :.. :: : :: ::.::::::
CCDS41 GEKLKRQKYDIMNVRARVQMLAKFSKKAGTPAKGKVGGRWK
210 220 230 240 250
>>CCDS30968.1 TNNT2 gene_id:7139|Hs108|chr1 (285 aa)
initn: 892 init1: 645 opt: 833 Z-score: 518.3 bits: 103.8 E(32554): 1.5e-22
Smith-Waterman score: 1021; 58.7% identity (74.3% similar) in 303 aa overlap (1-278:1-285)
10 20 30
pF1KE2 MSDTEE--QEYEEEQPEEEAAEEEEEAPEEP-EPVAEPEEER------------------
::: :: .:::::. :: :.::.::: :: : :: :: :
CCDS30 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE2 ----PKPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEE
::: : .: :.:::::.:::::::::::::::::: :::.::..:::.:::::::
CCDS30 EESKPKP-RSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEE
70 80 90 100 110
100 110 120 130 140 150
pF1KE2 LVALKERIERRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLS
::.::.::::::.:::::::.:.:.:.::: .::::. :.:::: ...:::.:.:::.::
CCDS30 LVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALS
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE2 NMGAHFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQP
:: :::::. :.:.: ::::: :: : .::.::.: : ::...:.:::
CCDS30 NM-MHFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLR-----------
180 190 200 210 220
220 230 240 250 260 270
pF1KE2 SCPAREKAQELSDWIHQLESEKFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGG
:::.:: . :..::.:::::. :.:::::::::: :::. :: : ::..: :
CCDS30 -----EKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTG
230 240 250 260 270 280
pF1KE2 RWK
:::
CCDS30 RWK
>>CCDS41596.1 TNNT3 gene_id:7140|Hs108|chr11 (250 aa)
initn: 988 init1: 787 opt: 830 Z-score: 517.3 bits: 103.4 E(32554): 1.7e-22
Smith-Waterman score: 1014; 59.8% identity (79.0% similar) in 281 aa overlap (1-278:1-250)
10 20 30 40 50 60
pF1KE2 MSDTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGER
::: : .. ::. ::: :.::::. :: .: ::: : :::::::.
CCDS41 MSDEEVEQVEEQYEEEEEAQEEEEVQEEEKP-------RPK--------LTAPKIPEGEK
10 20 30 40
70 80 90 100 110 120
pF1KE2 VDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFRTEK
::::::..::..:::.:::.::: ::: ::::::::::::::::.::.:::::::.:.::
CCDS41 VDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 ERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRE
::::: .::::: :.:::.::.::::: ::::.::.:::....::.::.:::::.::.::
CCDS41 ERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTARE
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 MKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCPAREKAQELSDWIHQLESEKFDL
:: .::.::.:::.::..::..:: .::.:: . .:::: .::..
CCDS41 MKKKILAERRKPLNIDHLGEDKLR----------------DKAKELWETLHQLEIDKFEF
170 180 190 200
250 260 270
pF1KE2 MAKLKQQKYEINVLYNRISHAQKFRKGAG---KGRVGGRWK
:::.:::.:..: .::..::: : :: ::.::::::
CCDS41 GEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
210 220 230 240 250
>>CCDS73002.1 TNNT2 gene_id:7139|Hs108|chr1 (282 aa)
initn: 986 init1: 645 opt: 824 Z-score: 513.0 bits: 102.8 E(32554): 3e-22
Smith-Waterman score: 1012; 59.3% identity (75.3% similar) in 300 aa overlap (1-278:1-282)
10 20 30 40
pF1KE2 MSDTEE--QEYEEEQPEE--EAAEEEEEAPEEPEPV-AEPEEE---------------RP
::: :: .:::::. :: :::::. :: : : . :: .:: .:
CCDS73 MSDIEEVVEEYEEEEQEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEESKP
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE2 KPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALK
:: : .: :.:::::.:::::::::::::::::: :::.::..:::.:::::::::.::
CCDS73 KP-RSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEELVSLK
70 80 90 100 110
110 120 130 140 150 160
pF1KE2 ERIERRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAH
.::::::.:::::::.:.:.:.::: .::::. :.:::: ...:::.:.:::.:::: :
CCDS73 DRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSNM-MH
120 130 140 150 160 170
170 180 190 200 210
pF1KE2 FGGYLVKA--EQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLRARSAWLPPSQPSCP
::::. :: :.: ::::: :: : .::.::.: : ::...:.:::
CCDS73 FGGYIQKAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLR--------------
180 190 200 210 220
220 230 240 250 260 270
pF1KE2 AREKAQELSDWIHQLESEKFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
:::.:: . :..::.:::::. :.:::::::::: :::. :: : ::..: ::::
CCDS73 --EKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
230 240 250 260 270 280
>>CCDS30969.1 TNNT2 gene_id:7139|Hs108|chr1 (288 aa)
initn: 979 init1: 645 opt: 817 Z-score: 508.7 bits: 102.0 E(32554): 5.1e-22
Smith-Waterman score: 1005; 58.2% identity (73.5% similar) in 306 aa overlap (1-278:1-288)
10 20 30
pF1KE2 MSDTEE--QEYEEEQPEEEAAEEEEEAPEEP-EPVAEPEEER------------------
::: :: .:::::. :: :.::.::: :: : :: :: :
CCDS30 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE2 ----PKPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEE
::: : .: :.:::::.:::::::::::::::::: :::.::..:::.:::::::
CCDS30 EESKPKP-RSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEE
70 80 90 100 110
100 110 120 130 140 150
pF1KE2 LVALKERIERRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLS
::.::.::::::.:::::::.:.:.:.::: .::::. :.:::: ...:::.:.:::.::
CCDS30 LVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALS
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE2 NMGAHFGGYLVK---AEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLRARSAWLPP
:: :::::. : .:.: ::::: :: : .::.::.: : ::...:.:::
CCDS30 NM-MHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLR--------
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE2 SQPSCPAREKAQELSDWIHQLESEKFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGR
:::.:: . :..::.:::::. :.:::::::::: :::. :: : ::..
CCDS30 --------EKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAK
240 250 260 270 280
pF1KE2 VGGRWK
: ::::
CCDS30 VTGRWK
278 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 02:47:39 2016 done: Tue Nov 8 02:47:40 2016
Total Scan time: 2.930 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]