Result of FASTA (omim) for
pFN21AE2476
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2476, 500 aa
1>>>pF1KE2476 500 - 500 aa - 500 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0240+/-0.000354; mu= 19.5750+/- 0.022
mean_var=62.8694+/-12.720, 0's: 0 Z-trim(113.7): 77 B-trim: 64 in 1/53
Lambda= 0.161754
statistics sampled from 23120 (23198) to 23120 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.272), width: 16
Scan time: 7.720
The best scores are: opt bits E(85289)
NP_689703 (OMIM: 610194,615181) UDP-GalNAc:beta-1, ( 500) 3455 815.1 0
XP_006711812 (OMIM: 610194,615181) PREDICTED: UDP- ( 586) 3383 798.3 0
XP_016855883 (OMIM: 610194,615181) PREDICTED: UDP- ( 541) 3204 756.5 4.3e-218
XP_016855884 (OMIM: 610194,615181) PREDICTED: UDP- ( 485) 2729 645.6 9.2e-185
NP_001264084 (OMIM: 610194,615181) UDP-GalNAc:beta ( 326) 1645 392.6 9.4e-109
NP_542172 (OMIM: 271640,615291,615349) beta-1,3-ga ( 329) 296 77.8 5.5e-14
XP_005246988 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 270 71.7 3.7e-12
NP_066191 (OMIM: 603093) beta-1,3-galactosyltransf ( 326) 270 71.7 3.7e-12
XP_011510387 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 270 71.7 3.7e-12
XP_006712882 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 270 71.7 3.7e-12
NP_003774 (OMIM: 603018) beta-1,3-galactosyltransf ( 422) 267 71.1 7.4e-12
XP_005247918 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
NP_149358 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331) 215 58.8 2.7e-08
NP_003772 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331) 215 58.8 2.7e-08
XP_016862897 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
XP_005247919 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
XP_005247916 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
XP_006713868 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
XP_016862895 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
XP_016862894 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
XP_016862896 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
XP_006713866 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
XP_016862898 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
NP_149359 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331) 215 58.8 2.7e-08
XP_006713867 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
XP_005247921 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
NP_001033717 (OMIM: 111400,603094,615021) UDP-GalN ( 331) 215 58.8 2.7e-08
NP_149357 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331) 215 58.8 2.7e-08
XP_016862899 (OMIM: 111400,603094,615021) PREDICTE ( 331) 215 58.8 2.7e-08
XP_016862891 (OMIM: 111400,603094,615021) PREDICTE ( 451) 215 58.9 3.5e-08
XP_016862892 (OMIM: 111400,603094,615021) PREDICTE ( 451) 215 58.9 3.5e-08
XP_016862893 (OMIM: 111400,603094,615021) PREDICTE ( 451) 215 58.9 3.5e-08
XP_016883719 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
XP_016883724 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
XP_016883720 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
NP_149361 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 197 54.6 4.7e-07
XP_016883725 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
XP_016883723 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
NP_149360 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 197 54.6 4.7e-07
XP_016883721 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
XP_016883729 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
XP_016883718 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
XP_016883727 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
XP_016883728 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
XP_016883726 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
XP_016883717 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
XP_016883730 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
NP_001265579 (OMIM: 604066) beta-1,3-galactosyltra ( 310) 197 54.6 4.7e-07
NP_006048 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 197 54.6 4.7e-07
XP_016883716 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 197 54.6 4.7e-07
>>NP_689703 (OMIM: 610194,615181) UDP-GalNAc:beta-1,3-N- (500 aa)
initn: 3455 init1: 3455 opt: 3455 Z-score: 4353.5 bits: 815.1 E(85289): 0
Smith-Waterman score: 3455; 100.0% identity (100.0% similar) in 500 aa overlap (1-500:1-500)
10 20 30 40 50 60
pF1KE2 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFPQWKSTHYDVVVGVLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFPQWKSTHYDVVVGVLSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 RNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 VLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 VLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 QAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 VTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 VTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 RNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 RNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 IDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 IDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 DIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 DIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWE
430 440 450 460 470 480
490 500
pF1KE2 LTELWKLKERCGDPCRCQAR
::::::::::::::::::::
NP_689 LTELWKLKERCGDPCRCQAR
490 500
>>XP_006711812 (OMIM: 610194,615181) PREDICTED: UDP-GalN (586 aa)
initn: 3383 init1: 3383 opt: 3383 Z-score: 4261.7 bits: 798.3 E(85289): 0
Smith-Waterman score: 3383; 99.8% identity (99.8% similar) in 493 aa overlap (1-493:1-493)
10 20 30 40 50 60
pF1KE2 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFPQWKSTHYDVVVGVLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFPQWKSTHYDVVVGVLSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 VLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 QAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QAEQEEALFIARFSPPSCGVQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 VTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VTVNDGGGVLRVITAGEGALPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 RNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 IDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IDLEAVFNRIVQKNLDGPNFWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 DIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DIVKWLASNSGRLKTYQGEDVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWE
430 440 450 460 470 480
490 500
pF1KE2 LTELWKLKERCGDPCRCQAR
::::::::::: :
XP_006 LTELWKLKERCPDSKLAREDCLQILQMFSPSVTFGNSSLSALTETWCHLRHDPQDTSHVS
490 500 510 520 530 540
>>XP_016855883 (OMIM: 610194,615181) PREDICTED: UDP-GalN (541 aa)
initn: 3199 init1: 3199 opt: 3204 Z-score: 4036.4 bits: 756.5 E(85289): 4.3e-218
Smith-Waterman score: 3294; 92.3% identity (92.3% similar) in 532 aa overlap (10-500:10-541)
10 20 30
pF1KE2 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPA-----------------------
::::::::::::::::::::::::::::
XP_016 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPAGGVSLLLPRLECNGAVSAHPNLH
10 20 30 40 50 60
40 50 60 70
pF1KE2 ------------------DQLALFPQWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLL
::::::::::::::::::::::::::::::::::::::::::
XP_016 LPGSRDSPASASQVAGITDQLALFPQWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLL
70 80 90 100 110 120
80 90 100 110 120 130
pF1KE2 QHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGL
130 140 150 160 170 180
140 150 160 170 180 190
pF1KE2 PEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCG
190 200 210 220 230 240
200 210 220 230 240 250
pF1KE2 VQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGA
250 260 270 280 290 300
260 270 280 290 300 310
pF1KE2 LPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDD
310 320 330 340 350 360
320 330 340 350 360 370
pF1KE2 IVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRIVQKNLDGPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRIVQKNLDGPN
370 380 390 400 410 420
380 390 400 410 420 430
pF1KE2 FWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGE
430 440 450 460 470 480
440 450 460 470 480 490
pF1KE2 DVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQA
490 500 510 520 530 540
500
pF1KE2 R
:
XP_016 R
>>XP_016855884 (OMIM: 610194,615181) PREDICTED: UDP-GalN (485 aa)
initn: 2724 init1: 2724 opt: 2729 Z-score: 3438.1 bits: 645.6 E(85289): 9.2e-185
Smith-Waterman score: 2819; 91.3% identity (91.3% similar) in 469 aa overlap (10-437:10-478)
10 20 30
pF1KE2 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPA-----------------------
::::::::::::::::::::::::::::
XP_016 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPAGGVSLLLPRLECNGAVSAHPNLH
10 20 30 40 50 60
40 50 60 70
pF1KE2 ------------------DQLALFPQWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLL
::::::::::::::::::::::::::::::::::::::::::
XP_016 LPGSRDSPASASQVAGITDQLALFPQWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLL
70 80 90 100 110 120
80 90 100 110 120 130
pF1KE2 QHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGL
130 140 150 160 170 180
140 150 160 170 180 190
pF1KE2 PEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCG
190 200 210 220 230 240
200 210 220 230 240 250
pF1KE2 VQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGA
250 260 270 280 290 300
260 270 280 290 300 310
pF1KE2 LPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDD
310 320 330 340 350 360
320 330 340 350 360 370
pF1KE2 IVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRIVQKNLDGPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRIVQKNLDGPN
370 380 390 400 410 420
380 390 400 410 420 430
pF1KE2 FWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FWWGNFRLNWAVDRTGKWQELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQAM
430 440 450 460 470 480
440 450 460 470 480 490
pF1KE2 DVSMGIWMAAIGPKRYQDSLWLCEKTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQA
XP_016 YRVKM
>>NP_001264084 (OMIM: 610194,615181) UDP-GalNAc:beta-1,3 (326 aa)
initn: 1640 init1: 1640 opt: 1645 Z-score: 2073.5 bits: 392.6 E(85289): 9.4e-109
Smith-Waterman score: 1735; 86.9% identity (86.9% similar) in 312 aa overlap (10-280:10-321)
10 20 30
pF1KE2 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPA-----------------------
::::::::::::::::::::::::::::
NP_001 MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPAGGVSLLLPRLECNGAVSAHPNLH
10 20 30 40 50 60
40 50 60 70
pF1KE2 ------------------DQLALFPQWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLL
::::::::::::::::::::::::::::::::::::::::::
NP_001 LPGSRDSPASASQVAGITDQLALFPQWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLL
70 80 90 100 110 120
80 90 100 110 120 130
pF1KE2 QHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGL
130 140 150 160 170 180
140 150 160 170 180 190
pF1KE2 PEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEEALFIARFSPPSCG
190 200 210 220 230 240
200 210 220 230 240 250
pF1KE2 VQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQVNKLWYKPVEQFILPESFEGTIVWESQDLHGLVSRNLHKVTVNDGGGVLRVITAGEGA
250 260 270 280 290 300
260 270 280 290 300 310
pF1KE2 LPHEFLEGVEGVAGGFIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDD
:::::::::::::::::::::
NP_001 LPHEFLEGVEGVAGGFIYTIQGKFAS
310 320
>>NP_542172 (OMIM: 271640,615291,615349) beta-1,3-galact (329 aa)
initn: 298 init1: 125 opt: 296 Z-score: 372.1 bits: 77.8 E(85289): 5.5e-14
Smith-Waterman score: 296; 28.3% identity (59.6% similar) in 198 aa overlap (305-496:104-301)
280 290 300 310 320 330
pF1KE2 FIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVV-DTYRNVP
:: :..:.. . :.... .. :.:.:.
NP_542 SVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLT
80 90 100 110 120 130
340 350 360 370 380 390
pF1KE2 AKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRI-VQKNLDGPNFWWGNFRLNWAVD
::.: . : : ..:...::.::: . :.:.. .. ... ..:: : :
NP_542 AKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVK
140 150 160 170 180 190
400 410 420 430 440 450
pF1KE2 RTGKWQELEYP-SPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIG
:.:.: . : .: :.:::.: :.:..: . :.....::::.: :.: .
NP_542 PGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVD
200 210 220 230 240 250
460 470 480 490 500
pF1KE2 PKRYQDSLWLCE---KTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR
.: .: . : . : . .: . . : .. : : : :.
NP_542 VQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYD
260 270 280 290 300 310
NP_542 WSAPPSQCCQRREGIP
320
>>XP_005246988 (OMIM: 603093) PREDICTED: beta-1,3-galact (326 aa)
initn: 258 init1: 110 opt: 270 Z-score: 339.3 bits: 71.7 E(85289): 3.7e-12
Smith-Waterman score: 270; 25.3% identity (61.6% similar) in 190 aa overlap (307-485:127-315)
280 290 300 310 320 330
pF1KE2 YTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKL
. ....::.:. ::. : .:.:.:. :
XP_005 IRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKT
100 110 120 130 140 150
340 350 360 370 380 390
pF1KE2 LNFYRWTVETTS-FNLLLKTDDDCYIDLEAVFNRIVQKNLDGPNFWWGNFRLNWAV--DR
: .::.. : . ..:::.: ..... .. .... . .. .. .: . :
XP_005 LMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYVINGGPIRDV
160 170 180 190 200 210
400 410 420 430 440 450
pF1KE2 TGKW---QELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAI
.:: ..: ::. :: : :.::..: :... . ..: . . . ::: .:. . .
XP_005 RSKWYMPRDL-YPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDVYVGLCLRKL
220 230 240 250 260 270
460 470 480 490 500
pF1KE2 GPKRYQDS---LW-LCEKTCE-TGMLSSPQYSPWELTELWKLKERCGDPCRCQAR
: . .:.: : . . :. ... : :: :. ..:
XP_005 GIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSSKKHLRC
280 290 300 310 320
>>NP_066191 (OMIM: 603093) beta-1,3-galactosyltransferas (326 aa)
initn: 258 init1: 110 opt: 270 Z-score: 339.3 bits: 71.7 E(85289): 3.7e-12
Smith-Waterman score: 270; 25.3% identity (61.6% similar) in 190 aa overlap (307-485:127-315)
280 290 300 310 320 330
pF1KE2 YTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKL
. ....::.:. ::. : .:.:.:. :
NP_066 IRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKT
100 110 120 130 140 150
340 350 360 370 380 390
pF1KE2 LNFYRWTVETTS-FNLLLKTDDDCYIDLEAVFNRIVQKNLDGPNFWWGNFRLNWAV--DR
: .::.. : . ..:::.: ..... .. .... . .. .. .: . :
NP_066 LMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYVINGGPIRDV
160 170 180 190 200 210
400 410 420 430 440 450
pF1KE2 TGKW---QELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAI
.:: ..: ::. :: : :.::..: :... . ..: . . . ::: .:. . .
NP_066 RSKWYMPRDL-YPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDVYVGLCLRKL
220 230 240 250 260 270
460 470 480 490 500
pF1KE2 GPKRYQDS---LW-LCEKTCE-TGMLSSPQYSPWELTELWKLKERCGDPCRCQAR
: . .:.: : . . :. ... : :: :. ..:
NP_066 GIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSSKKHLRC
280 290 300 310 320
>>XP_011510387 (OMIM: 603093) PREDICTED: beta-1,3-galact (326 aa)
initn: 258 init1: 110 opt: 270 Z-score: 339.3 bits: 71.7 E(85289): 3.7e-12
Smith-Waterman score: 270; 25.3% identity (61.6% similar) in 190 aa overlap (307-485:127-315)
280 290 300 310 320 330
pF1KE2 YTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKL
. ....::.:. ::. : .:.:.:. :
XP_011 IRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKT
100 110 120 130 140 150
340 350 360 370 380 390
pF1KE2 LNFYRWTVETTS-FNLLLKTDDDCYIDLEAVFNRIVQKNLDGPNFWWGNFRLNWAV--DR
: .::.. : . ..:::.: ..... .. .... . .. .. .: . :
XP_011 LMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYVINGGPIRDV
160 170 180 190 200 210
400 410 420 430 440 450
pF1KE2 TGKW---QELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAI
.:: ..: ::. :: : :.::..: :... . ..: . . . ::: .:. . .
XP_011 RSKWYMPRDL-YPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDVYVGLCLRKL
220 230 240 250 260 270
460 470 480 490 500
pF1KE2 GPKRYQDS---LW-LCEKTCE-TGMLSSPQYSPWELTELWKLKERCGDPCRCQAR
: . .:.: : . . :. ... : :: :. ..:
XP_011 GIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSSKKHLRC
280 290 300 310 320
>>XP_006712882 (OMIM: 603093) PREDICTED: beta-1,3-galact (326 aa)
initn: 258 init1: 110 opt: 270 Z-score: 339.3 bits: 71.7 E(85289): 3.7e-12
Smith-Waterman score: 270; 25.3% identity (61.6% similar) in 190 aa overlap (307-485:127-315)
280 290 300 310 320 330
pF1KE2 YTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVVDTYRNVPAKL
. ....::.:. ::. : .:.:.:. :
XP_006 IRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHNLTLKT
100 110 120 130 140 150
340 350 360 370 380 390
pF1KE2 LNFYRWTVETTS-FNLLLKTDDDCYIDLEAVFNRIVQKNLDGPNFWWGNFRLNWAV--DR
: .::.. : . ..:::.: ..... .. .... . .. .. .: . :
XP_006 LMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGYVINGGPIRDV
160 170 180 190 200 210
400 410 420 430 440 450
pF1KE2 TGKW---QELEYPSPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAI
.:: ..: ::. :: : :.::..: :... . ..: . . . ::: .:. . .
XP_006 RSKWYMPRDL-YPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDVYVGLCLRKL
220 230 240 250 260 270
460 470 480 490 500
pF1KE2 GPKRYQDS---LW-LCEKTCE-TGMLSSPQYSPWELTELWKLKERCGDPCRCQAR
: . .:.: : . . :. ... : :: :. ..:
XP_006 GIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSSKKHLRC
280 290 300 310 320
500 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 20:35:48 2016 done: Mon Nov 7 20:35:49 2016
Total Scan time: 7.720 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]