Result of FASTA (ccds) for
pFN21AE2396
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2396, 258 aa
1>>>pF1KE2396 258 - 258 aa - 258 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7654+/-0.000772; mu= 8.3184+/- 0.047
mean_var=98.8861+/-19.687, 0's: 0 Z-trim(110.6): 10 B-trim: 0 in 0/52
Lambda= 0.128975
statistics sampled from 11761 (11768) to 11761 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.73), E-opt: 0.2 (0.361), width: 16
Scan time: 2.380
The best scores are: opt bits E(32554)
CCDS46772.1 SGO1 gene_id:151648|Hs108|chr3 ( 258) 1677 321.8 2.9e-88
CCDS2635.1 SGO1 gene_id:151648|Hs108|chr3 ( 292) 1641 315.2 3.3e-86
CCDS46774.1 SGO1 gene_id:151648|Hs108|chr3 ( 275) 1043 203.9 9.8e-53
CCDS46771.1 SGO1 gene_id:151648|Hs108|chr3 ( 309) 1043 203.9 1.1e-52
CCDS56243.1 SGO1 gene_id:151648|Hs108|chr3 ( 215) 1032 201.8 3.3e-52
CCDS46773.1 SGO1 gene_id:151648|Hs108|chr3 ( 527) 1032 201.9 7.2e-52
CCDS33716.1 SGO1 gene_id:151648|Hs108|chr3 ( 561) 1032 202.0 7.6e-52
>>CCDS46772.1 SGO1 gene_id:151648|Hs108|chr3 (258 aa)
initn: 1677 init1: 1677 opt: 1677 Z-score: 1698.2 bits: 321.8 E(32554): 2.9e-88
Smith-Waterman score: 1677; 100.0% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
190 200 210 220 230 240
250
pF1KE2 FKQKKDLRRSKKSMKQIQ
::::::::::::::::::
CCDS46 FKQKKDLRRSKKSMKQIQ
250
>>CCDS2635.1 SGO1 gene_id:151648|Hs108|chr3 (292 aa)
initn: 1640 init1: 1640 opt: 1641 Z-score: 1661.2 bits: 315.2 E(32554): 3.3e-86
Smith-Waterman score: 1641; 98.1% identity (98.8% similar) in 257 aa overlap (1-257:1-257)
10 20 30 40 50 60
pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
190 200 210 220 230 240
250
pF1KE2 FKQKKDLRRSKKSMKQIQ
:::::::::::: ..
CCDS26 FKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKCKLETHICLR
250 260 270 280 290
>>CCDS46774.1 SGO1 gene_id:151648|Hs108|chr3 (275 aa)
initn: 1663 init1: 1024 opt: 1043 Z-score: 1060.2 bits: 203.9 E(32554): 9.8e-53
Smith-Waterman score: 1633; 93.8% identity (93.8% similar) in 275 aa overlap (1-258:1-275)
10 20 30 40 50 60
pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
70 80 90 100 110 120
130 140 150 160
pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE-----------------ATPPE
:::::::::::::::::::::::::::::::::::::: :::::
CCDS46 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE2 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
190 200 210 220 230 240
230 240 250
pF1KE2 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ
:::::::::::::::::::::::::::::::::::
CCDS46 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ
250 260 270
>>CCDS46771.1 SGO1 gene_id:151648|Hs108|chr3 (309 aa)
initn: 1626 init1: 1024 opt: 1043 Z-score: 1059.4 bits: 203.9 E(32554): 1.1e-52
Smith-Waterman score: 1597; 92.0% identity (92.7% similar) in 274 aa overlap (1-257:1-274)
10 20 30 40 50 60
pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
70 80 90 100 110 120
130 140 150 160
pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE-----------------ATPPE
:::::::::::::::::::::::::::::::::::::: :::::
CCDS46 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE2 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
190 200 210 220 230 240
230 240 250
pF1KE2 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ
::::::::::::::::::::::::::::: ..
CCDS46 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC
250 260 270 280 290 300
CCDS46 KLETHICLR
>>CCDS56243.1 SGO1 gene_id:151648|Hs108|chr3 (215 aa)
initn: 1024 init1: 1024 opt: 1032 Z-score: 1050.8 bits: 201.8 E(32554): 3.3e-52
Smith-Waterman score: 1032; 96.4% identity (96.4% similar) in 166 aa overlap (1-166:1-166)
10 20 30 40 50 60
pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
:::::::::::::::::::::::::::::::::::::: : :
CCDS56 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGALEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
CCDS56 SPAKEAIFILYYVREFVSRFPDCRKCKLETHICLR
190 200 210
>>CCDS46773.1 SGO1 gene_id:151648|Hs108|chr3 (527 aa)
initn: 1658 init1: 1024 opt: 1032 Z-score: 1044.7 bits: 201.9 E(32554): 7.2e-52
Smith-Waterman score: 1032; 96.4% identity (96.4% similar) in 166 aa overlap (1-166:1-166)
10 20 30 40 50 60
pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
:::::::::::::::::::::::::::::::::::::: : :
CCDS46 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
CCDS46 TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN
190 200 210 220 230 240
>--
initn: 683 init1: 648 opt: 665 Z-score: 675.7 bits: 133.7 E(32554): 2.6e-31
Smith-Waterman score: 665; 75.7% identity (84.7% similar) in 144 aa overlap (118-258:386-527)
90 100 110 120 130 140
pF1KE2 ECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDS---SRNLFVKDLPQIPLE
:. ..:.:... .: : . : .
CCDS46 SNREENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEK
360 370 380 390 400 410
150 160 170 180 190 200
pF1KE2 ETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVAL
::: :. . .:::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ETE--GSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVAL
420 430 440 450 460 470
210 220 230 240 250
pF1KE2 PKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ
480 490 500 510 520
>>CCDS33716.1 SGO1 gene_id:151648|Hs108|chr3 (561 aa)
initn: 1621 init1: 1024 opt: 1032 Z-score: 1044.3 bits: 202.0 E(32554): 7.6e-52
Smith-Waterman score: 1032; 96.4% identity (96.4% similar) in 166 aa overlap (1-166:1-166)
10 20 30 40 50 60
pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL
:::::::::::::::::::::::::::::::::::::: : :
CCDS33 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI
CCDS33 TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN
190 200 210 220 230 240
>--
initn: 646 init1: 611 opt: 629 Z-score: 639.0 bits: 127.0 E(32554): 2.8e-29
Smith-Waterman score: 629; 72.0% identity (82.5% similar) in 143 aa overlap (118-257:386-526)
90 100 110 120 130 140
pF1KE2 ECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDS---SRNLFVKDLPQIPLE
:. ..:.:... .: : . : .
CCDS33 SNREENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEK
360 370 380 390 400 410
150 160 170 180 190 200
pF1KE2 ETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVAL
::: :. . .:::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ETE--GSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVAL
420 430 440 450 460 470
210 220 230 240 250
pF1KE2 PKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ
:::::::::::::::::::::::::::::::::::::::::::::::: ..
CCDS33 PKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAI
480 490 500 510 520 530
CCDS33 FILYYVREFVSRFPDCRKCKLETHICLR
540 550 560
258 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 09:21:28 2016 done: Sun Nov 6 09:21:29 2016
Total Scan time: 2.380 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]