Result of FASTA (ccds) for
pFN21AE2386
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2386, 133 aa
1>>>pF1KE2386 133 - 133 aa - 133 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1774+/-0.000965; mu= 11.0514+/- 0.058
mean_var=54.1439+/-11.012, 0's: 0 Z-trim(103.0): 25 B-trim: 296 in 1/48
Lambda= 0.174301
statistics sampled from 7192 (7214) to 7192 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.222), width: 16
Scan time: 1.520
The best scores are: opt bits E(32554)
CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 848 221.2 1.5e-58
CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 599 158.6 1e-39
CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 563 149.5 5.5e-37
CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 559 148.5 1.1e-36
CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 549 146.1 7.8e-36
CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 480 128.7 1.1e-30
CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 ( 135) 438 118.1 1.6e-27
CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 335 92.2 1e-19
CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 ( 134) 330 91.0 2.4e-19
CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 325 89.7 5.9e-19
CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 ( 134) 319 88.2 1.6e-18
CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 272 76.4 8.4e-15
CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 270 75.9 8.5e-15
CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 269 75.6 9.9e-15
CCDS46925.1 RBP1 gene_id:5947|Hs108|chr3 ( 153) 222 63.8 4.1e-11
CCDS46926.1 RBP1 gene_id:5947|Hs108|chr3 ( 157) 220 63.3 5.9e-11
>>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa)
initn: 848 init1: 848 opt: 848 Z-score: 1164.8 bits: 221.2 E(32554): 1.5e-58
Smith-Waterman score: 848; 100.0% identity (100.0% similar) in 133 aa overlap (1-133:1-133)
10 20 30 40 50 60
pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH
70 80 90 100 110 120
130
pF1KE2 GTAVCTRTYEKEA
:::::::::::::
CCDS34 GTAVCTRTYEKEA
130
>>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa)
initn: 599 init1: 599 opt: 599 Z-score: 826.4 bits: 158.6 E(32554): 1e-39
Smith-Waterman score: 599; 67.2% identity (90.8% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
::.:: .::::..:.:::.:::.::::::::::...::::.:: ..:: ....: :::::
CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH
:::::.:: ::::::::::. ::.:.::: ::::.:::::.::..:::. :::...:::
CCDS51 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMTLTF
70 80 90 100 110 120
130
pF1KE2 GTAVCTRTYEKEA
: .: .: :::
CCDS51 GDVVAVRHYEKA
130
>>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 (132 aa)
initn: 557 init1: 557 opt: 563 Z-score: 777.5 bits: 149.5 E(32554): 5.5e-37
Smith-Waterman score: 563; 64.9% identity (84.7% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
: :::.::::::.:.::::::: .:::::::.::.:.::. :: :::..:.:..:::::
CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH
::::: :: ::::.::::::::: .::::: :::.:::::. ::. :. : ::.. .
CCDS62 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
70 80 90 100 110 120
130
pF1KE2 GTAVCTRTYEKEA
.. ::.::.
CCDS62 KGVTSTRVYERA
130
>>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa)
initn: 559 init1: 559 opt: 559 Z-score: 772.1 bits: 148.5 E(32554): 1.1e-36
Smith-Waterman score: 559; 63.4% identity (88.5% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
: . ::::::::.:.:::::::.::::.:::......:::.:: :.:::.:..:.:::::
CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH
:::::::: ::.:::::.::.::::::. :.: ..:.:::.:::. :.:..::..
CCDS62 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
70 80 90 100 110 120
130
pF1KE2 GTAVCTRTYEKEA
.:::: :::
CCDS62 KGVVCTRIYEKV
130
>>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa)
initn: 549 init1: 549 opt: 549 Z-score: 756.9 bits: 146.1 E(32554): 7.8e-36
Smith-Waterman score: 549; 68.1% identity (93.1% similar) in 116 aa overlap (1-116:1-116)
10 20 30 40 50 60
pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
::.:: .::::..:.:::.:::.::::::::::...::::.:: ..:: ....: :::::
CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH
:::::.:: ::::::::::. ::.:.::: ::::.:::::.::..:::. :::...
CCDS83 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMVSND
70 80 90 100 110 120
130
pF1KE2 GTAVCTRTYEKEA
CCDS83 NSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM
130 140 150 160
>>CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 (140 aa)
initn: 480 init1: 480 opt: 480 Z-score: 664.3 bits: 128.7 E(32554): 1.1e-30
Smith-Waterman score: 480; 51.9% identity (81.7% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
:.: . :::: .. .: .:::: ::.: :.:... ..:::. : .::..:.::.: :::
CCDS47 MIDQLQGTWKSISCENSEDYMKELGIGRASRKLGRLAKPTVTISTDGDVITIKTKSIFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH
.::::::: ::.: : .:.:: :::: .:...: :::.:::..:.:.:::... :
CCDS47 NEISFKLGEEFEEITPGGHKTKSKVTLDKESLIQVQDWDGKETTITRKLVDGKMVVESTV
70 80 90 100 110 120
130
pF1KE2 GTAVCTRTYEKEA
....:::::::
CCDS47 NSVICTRTYEKVSSNSVSNS
130 140
>>CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 (135 aa)
initn: 438 init1: 438 opt: 438 Z-score: 607.5 bits: 118.1 E(32554): 1.6e-27
Smith-Waterman score: 438; 50.0% identity (80.8% similar) in 130 aa overlap (2-131:4-133)
10 20 30 40 50
pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTF
:. . : :.:::::.::.::: ::::.: :....:.:: :: .: ::.::.::.
CCDS62 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 KNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTL
:.:..: :: .:.::::: ::.... .. : ::. :.:::.:.:..:.: ::::..
CCDS62 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC
70 80 90 100 110 120
120 130
pF1KE2 THGTAVCTRTYEKEA
. ....::: :::
CCDS62 VMNNVTCTRIYEKVE
130
>>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa)
initn: 325 init1: 160 opt: 335 Z-score: 467.3 bits: 92.2 E(32554): 1e-19
Smith-Waterman score: 335; 43.7% identity (73.3% similar) in 135 aa overlap (5-132:4-138)
10 20 30 40 50
pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQ--VASMTKPTTIIEKNGDILTLKTHSTF
: :.::.. :.::.. .: :::. :. ::. .::.. :...:: . .:: .:
CCDS11 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 KNTEISFKLGVEFDETTADDRKVKSIVTLDG-GKLV---HLQKWDGQETTLVRELI-DGK
..:::.::.: ::.: :.: : ::.: .. .:.: .: : .: .:. .::: ::.
CCDS11 RTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGE
60 70 80 90 100 110
120 130
pF1KE2 LILTLTHGTAVCTRTYEKEA
::::.: .::::.: .:
CCDS11 LILTMTADDVVCTRVYVRE
120 130
>>CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 (134 aa)
initn: 306 init1: 229 opt: 330 Z-score: 460.7 bits: 91.0 E(32554): 2.4e-19
Smith-Waterman score: 330; 42.6% identity (71.3% similar) in 129 aa overlap (7-132:7-134)
10 20 30 40 50 60
pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
:::.. ...::. :::.: . ::::..: : .:...:: . :: :::.:
CCDS31 MTRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTKVIDQDGDNFKTKTTSTFRN
10 20 30 40 50 60
70 80 90 100 110
pF1KE2 TEISFKLGVEFDETTA--DDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDG-KLILT
...: .:::::: : :.:.::..:: .: :: .:: . .:. .. :.: :: :
CCDS31 YDVDFTVGVEFDEYTKSLDNRHVKALVTWEGDVLVCVQKGE-KENRGWKQWIEGDKLYLE
70 80 90 100 110
120 130
pF1KE2 LTHGTAVCTRTYEKEA
:: : :: ....:.
CCDS31 LTCGDQVCRQVFKKK
120 130
>>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa)
initn: 330 init1: 152 opt: 325 Z-score: 453.8 bits: 89.7 E(32554): 5.9e-19
Smith-Waterman score: 325; 41.8% identity (70.1% similar) in 134 aa overlap (5-132:4-137)
10 20 30 40 50
pF1KE2 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVA--SMTKPTTIIEKNGDILTLKTHSTF
: ::::. .:.:::. .:.:::. :.:: . .:: . :...:: . .:: .:
CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 KNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVH----LQKWDGQETTLVRELIDGKL
..:::.::.: :.: :.: :: .:..: .. . .: : . :: .: .::: . .:
CCDS10 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDEL
60 70 80 90 100 110
120 130
pF1KE2 ILTLTHGTAVCTRTYEKEA
:::. .:::: : .:
CCDS10 ILTFGADDVVCTRIYVRE
120 130
133 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:14:42 2016 done: Sun Nov 6 23:14:42 2016
Total Scan time: 1.520 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]