Result of FASTA (ccds) for
pFN21AE2366
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2366, 466 aa
1>>>pF1KE2366 466 - 466 aa - 466 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4694+/-0.000984; mu= 12.2471+/- 0.059
mean_var=101.8556+/-21.192, 0's: 0 Z-trim(106.6): 88 B-trim: 67 in 1/51
Lambda= 0.127081
statistics sampled from 8968 (9060) to 8968 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.65), E-opt: 0.2 (0.278), width: 16
Scan time: 2.910
The best scores are: opt bits E(32554)
CCDS76463.1 EED gene_id:8726|Hs108|chr11 ( 466) 3253 607.3 1.1e-173
CCDS8273.1 EED gene_id:8726|Hs108|chr11 ( 441) 2224 418.6 6.5e-117
CCDS81612.1 EED gene_id:8726|Hs108|chr11 ( 361) 1655 314.2 1.4e-85
>>CCDS76463.1 EED gene_id:8726|Hs108|chr11 (466 aa)
initn: 3253 init1: 3253 opt: 3253 Z-score: 3231.7 bits: 607.3 E(32554): 1.1e-173
Smith-Waterman score: 3253; 100.0% identity (100.0% similar) in 466 aa overlap (1-466:1-466)
10 20 30 40 50 60
pF1KE2 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TRDIHRNYVDCVRWLGDLILSKSGRAILHSHQQCMRDPVSPNLRQHLSCENAIVCWKPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 TRDIHRNYVDCVRWLGDLILSKSGRAILHSHQQCMRDPVSPNLRQHLSCENAIVCWKPGK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED
370 380 390 400 410 420
430 440 450 460
pF1KE2 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR
::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR
430 440 450 460
>>CCDS8273.1 EED gene_id:8726|Hs108|chr11 (441 aa)
initn: 2223 init1: 2223 opt: 2224 Z-score: 2212.5 bits: 418.6 E(32554): 6.5e-117
Smith-Waterman score: 3013; 94.6% identity (94.6% similar) in 466 aa overlap (1-466:1-441)
10 20 30 40 50 60
pF1KE2 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TRDIHRNYVDCVRWLGDLILSKSGRAILHSHQQCMRDPVSPNLRQHLSCENAIVCWKPGK
::::::::::::::::::::::: ::::::::::::
CCDS82 TRDIHRNYVDCVRWLGDLILSKS-------------------------CENAIVCWKPGK
310 320 330
370 380 390 400 410 420
pF1KE2 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED
340 350 360 370 380 390
430 440 450 460
pF1KE2 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR
::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR
400 410 420 430 440
>>CCDS81612.1 EED gene_id:8726|Hs108|chr11 (361 aa)
initn: 2496 init1: 1655 opt: 1655 Z-score: 1649.9 bits: 314.2 E(32554): 1.4e-85
Smith-Waterman score: 2290; 77.5% identity (77.5% similar) in 466 aa overlap (1-466:1-361)
10 20 30 40 50 60
pF1KE2 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MSEREVSTAPAGTDMPAAKKQKLSSDENSNPDLSGDENDDAVSIESGTNTERPDTPTNTP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 NAPGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 SADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS
::
CCDS81 SA----------------------------------------------------------
310 320 330 340 350 360
pF1KE2 TRDIHRNYVDCVRWLGDLILSKSGRAILHSHQQCMRDPVSPNLRQHLSCENAIVCWKPGK
:::::::::::::
CCDS81 -----------------------------------------------SCENAIVCWKPGK
250
370 380 390 400 410 420
pF1KE2 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED
260 270 280 290 300 310
430 440 450 460
pF1KE2 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR
::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR
320 330 340 350 360
466 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 19:59:35 2016 done: Sun Nov 6 19:59:35 2016
Total Scan time: 2.910 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]