Result of FASTA (ccds) for
pFN21AE2296
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2296, 1165 aa
1>>>pF1KE2296 1165 - 1165 aa - 1165 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.5194+/-0.000995; mu= -1.6181+/- 0.060
mean_var=228.3713+/-45.898, 0's: 0 Z-trim(112.1): 21 B-trim: 0 in 0/53
Lambda= 0.084870
statistics sampled from 12881 (12898) to 12881 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.715), E-opt: 0.2 (0.396), width: 16
Scan time: 4.850
The best scores are: opt bits E(32554)
CCDS3666.1 TET2 gene_id:54790|Hs108|chr4 (1165) 7905 981.5 0
CCDS47120.1 TET2 gene_id:54790|Hs108|chr4 (2002) 7703 956.9 0
>>CCDS3666.1 TET2 gene_id:54790|Hs108|chr4 (1165 aa)
initn: 7905 init1: 7905 opt: 7905 Z-score: 5240.1 bits: 981.5 E(32554): 0
Smith-Waterman score: 7905; 100.0% identity (100.0% similar) in 1165 aa overlap (1-1165:1-1165)
10 20 30 40 50 60
pF1KE2 MEQDRTNHVEGNRLSPFLIPSPPICQTEPLATKLQNGSPLPERAHPEVNGDTKWHSFKSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 MEQDRTNHVEGNRLSPFLIPSPPICQTEPLATKLQNGSPLPERAHPEVNGDTKWHSFKSY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 YGIPCMKGSQNSRVSPDFTQESRGYSKCLQNGGIKRTVSEPSLSGLLQIKKLKQDQKANG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 YGIPCMKGSQNSRVSPDFTQESRGYSKCLQNGGIKRTVSEPSLSGLLQIKKLKQDQKANG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ERRNFGVSQERNPGESSQPNVSDLSDKKESVSSVAQENAVKDFTSFSTHNCSGPENPELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 ERRNFGVSQERNPGESSQPNVSDLSDKKESVSSVAQENAVKDFTSFSTHNCSGPENPELQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 ILNEQEGKSANYHDKNIVLLKNKAVLMPNGATVSASSVEHTHGELLEKTLSQYYPDCVSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 ILNEQEGKSANYHDKNIVLLKNKAVLMPNGATVSASSVEHTHGELLEKTLSQYYPDCVSI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AVQKTTSHINAINSQATNELSCEITHPSHTSGQINSAQTSNSELPPKPAAVVSEACDADD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 AVQKTTSHINAINSQATNELSCEITHPSHTSGQINSAQTSNSELPPKPAAVVSEACDADD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ADNASKLAAMLNTCSFQKPEQLQQQKSVFEICPSPAENNIQGTTKLASGEEFCSGSSSNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 ADNASKLAAMLNTCSFQKPEQLQQQKSVFEICPSPAENNIQGTTKLASGEEFCSGSSSNL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 QAPGGSSERYLKQNEMNGAYFKQSSVFTKDSFSATTTPPPPSQLLLSPPPPLPQVPQLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 QAPGGSSERYLKQNEMNGAYFKQSSVFTKDSFSATTTPPPPSQLLLSPPPPLPQVPQLPS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 EGKSTLNGGVLEEHHHYPNQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLSERP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 EGKSTLNGGVLEEHHHYPNQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLSERP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 QNNCVNRNDIQTAGTMTVPLCSEKTRPMSEHLKHNPPIFGSSGELQDNCQQLMRNKEQEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 QNNCVNRNDIQTAGTMTVPLCSEKTRPMSEHLKHNPPIFGSSGELQDNCQQLMRNKEQEI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 LKGRDKEQTRDLVPPTQHYLKPGWIELKAPRFHQAESHLKRNEASLPSILQYQPNLSNQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 LKGRDKEQTRDLVPPTQHYLKPGWIELKAPRFHQAESHLKRNEASLPSILQYQPNLSNQM
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 TSKQYTGNSNMPGGLPRQAYTQKTTQLEHKSQMYQVEMNQGQSQGTVDQHLQFQKPSHQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 TSKQYTGNSNMPGGLPRQAYTQKTTQLEHKSQMYQVEMNQGQSQGTVDQHLQFQKPSHQV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 HFSKTDHLPKAHVQSLCGTRFHFQQRADSQTEKLMSPVLKQHLNQQASETEPFSNSHLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 HFSKTDHLPKAHVQSLCGTRFHFQQRADSQTEKLMSPVLKQHLNQQASETEPFSNSHLLQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 HKPHKQAAQTQPSQSSHLPQNQQQQQKLQIKNKEEILQTFPHPQSNNDQQREGSFFGQTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 HKPHKQAAQTQPSQSSHLPQNQQQQQKLQIKNKEEILQTFPHPQSNNDQQREGSFFGQTK
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 VEECFHGENQYSKSSEFETHNVQMGLEEVQNINRRNSPYSQTMKSSACKIQVSCSNNTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 VEECFHGENQYSKSSEFETHNVQMGLEEVQNINRRNSPYSQTMKSSACKIQVSCSNNTHL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE2 VSENKEQTTHPELFAGNKTQNLHHMQYFPNNVIPKQDLLHRCFQEQEQKSQQASVLQGYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 VSENKEQTTHPELFAGNKTQNLHHMQYFPNNVIPKQDLLHRCFQEQEQKSQQASVLQGYK
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE2 NRNQDMSGQQAAQLAQQRYLIHNHANVFPVPDQGGSHTQTPPQKDTQKHAALRWHLLQKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 NRNQDMSGQQAAQLAQQRYLIHNHANVFPVPDQGGSHTQTPPQKDTQKHAALRWHLLQKQ
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE2 EQQQTQQPQTESCHSQMHRPIKVEPGCKPHACMHTAPPENKTWKKVTKQENPPASCDNVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 EQQQTQQPQTESCHSQMHRPIKVEPGCKPHACMHTAPPENKTWKKVTKQENPPASCDNVQ
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE2 QKSIIETMEQHLKQFHAKSLFDHKALTLKSQKQVKVEMSGPVTVLTRQTTAAELDSHTPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 QKSIIETMEQHLKQFHAKSLFDHKALTLKSQKQVKVEMSGPVTVLTRQTTAAELDSHTPA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE2 LEQQTTSSEKTPTKRTAASVLNNFIESPSKLLDTPIKNLLDTPVKTQYDFPSCRCVGKCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS36 LEQQTTSSEKTPTKRTAASVLNNFIESPSKLLDTPIKNLLDTPVKTQYDFPSCRCVGKCQ
1090 1100 1110 1120 1130 1140
1150 1160
pF1KE2 KCTETHGVYPELANLSSDMGFSFFF
:::::::::::::::::::::::::
CCDS36 KCTETHGVYPELANLSSDMGFSFFF
1150 1160
>>CCDS47120.1 TET2 gene_id:54790|Hs108|chr4 (2002 aa)
initn: 7697 init1: 7697 opt: 7703 Z-score: 5102.7 bits: 956.9 E(32554): 0
Smith-Waterman score: 7703; 97.9% identity (98.5% similar) in 1168 aa overlap (1-1163:1-1168)
10 20 30 40 50 60
pF1KE2 MEQDRTNHVEGNRLSPFLIPSPPICQTEPLATKLQNGSPLPERAHPEVNGDTKWHSFKSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MEQDRTNHVEGNRLSPFLIPSPPICQTEPLATKLQNGSPLPERAHPEVNGDTKWHSFKSY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 YGIPCMKGSQNSRVSPDFTQESRGYSKCLQNGGIKRTVSEPSLSGLLQIKKLKQDQKANG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YGIPCMKGSQNSRVSPDFTQESRGYSKCLQNGGIKRTVSEPSLSGLLQIKKLKQDQKANG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 ERRNFGVSQERNPGESSQPNVSDLSDKKESVSSVAQENAVKDFTSFSTHNCSGPENPELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ERRNFGVSQERNPGESSQPNVSDLSDKKESVSSVAQENAVKDFTSFSTHNCSGPENPELQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 ILNEQEGKSANYHDKNIVLLKNKAVLMPNGATVSASSVEHTHGELLEKTLSQYYPDCVSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ILNEQEGKSANYHDKNIVLLKNKAVLMPNGATVSASSVEHTHGELLEKTLSQYYPDCVSI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 AVQKTTSHINAINSQATNELSCEITHPSHTSGQINSAQTSNSELPPKPAAVVSEACDADD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AVQKTTSHINAINSQATNELSCEITHPSHTSGQINSAQTSNSELPPKPAAVVSEACDADD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 ADNASKLAAMLNTCSFQKPEQLQQQKSVFEICPSPAENNIQGTTKLASGEEFCSGSSSNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ADNASKLAAMLNTCSFQKPEQLQQQKSVFEICPSPAENNIQGTTKLASGEEFCSGSSSNL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 QAPGGSSERYLKQNEMNGAYFKQSSVFTKDSFSATTTPPPPSQLLLSPPPPLPQVPQLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QAPGGSSERYLKQNEMNGAYFKQSSVFTKDSFSATTTPPPPSQLLLSPPPPLPQVPQLPS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 EGKSTLNGGVLEEHHHYPNQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLSERP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EGKSTLNGGVLEEHHHYPNQSNTTLLREVKIEGKPEAPPSQSPNPSTHVCSPSPMLSERP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 QNNCVNRNDIQTAGTMTVPLCSEKTRPMSEHLKHNPPIFGSSGELQDNCQQLMRNKEQEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QNNCVNRNDIQTAGTMTVPLCSEKTRPMSEHLKHNPPIFGSSGELQDNCQQLMRNKEQEI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 LKGRDKEQTRDLVPPTQHYLKPGWIELKAPRFHQAESHLKRNEASLPSILQYQPNLSNQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LKGRDKEQTRDLVPPTQHYLKPGWIELKAPRFHQAESHLKRNEASLPSILQYQPNLSNQM
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 TSKQYTGNSNMPGGLPRQAYTQKTTQLEHKSQMYQVEMNQGQSQGTVDQHLQFQKPSHQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TSKQYTGNSNMPGGLPRQAYTQKTTQLEHKSQMYQVEMNQGQSQGTVDQHLQFQKPSHQV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 HFSKTDHLPKAHVQSLCGTRFHFQQRADSQTEKLMSPVLKQHLNQQASETEPFSNSHLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 HFSKTDHLPKAHVQSLCGTRFHFQQRADSQTEKLMSPVLKQHLNQQASETEPFSNSHLLQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 HKPHKQAAQTQPSQSSHLPQNQQQQQKLQIKNKEEILQTFPHPQSNNDQQREGSFFGQTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 HKPHKQAAQTQPSQSSHLPQNQQQQQKLQIKNKEEILQTFPHPQSNNDQQREGSFFGQTK
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 VEECFHGENQYSKSSEFETHNVQMGLEEVQNINRRNSPYSQTMKSSACKIQVSCSNNTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VEECFHGENQYSKSSEFETHNVQMGLEEVQNINRRNSPYSQTMKSSACKIQVSCSNNTHL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE2 VSENKEQTTHPELFAGNKTQNLHHMQYFPNNVIPKQDLLHRCFQEQEQKSQQASVLQGYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VSENKEQTTHPELFAGNKTQNLHHMQYFPNNVIPKQDLLHRCFQEQEQKSQQASVLQGYK
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE2 NRNQDMSGQQAAQLAQQRYLIHNHANVFPVPDQGGSHTQTPPQKDTQKHAALRWHLLQKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NRNQDMSGQQAAQLAQQRYLIHNHANVFPVPDQGGSHTQTPPQKDTQKHAALRWHLLQKQ
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE2 EQQQTQQPQTESCHSQMHRPIKVEPGCKPHACMHTAPPENKTWKKVTKQENPPASCDNVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EQQQTQQPQTESCHSQMHRPIKVEPGCKPHACMHTAPPENKTWKKVTKQENPPASCDNVQ
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE2 QKSIIETMEQHLKQFHAKSLFDHKALTLKSQKQVKVEMSGPVTVLTRQTTAAELDSHTPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QKSIIETMEQHLKQFHAKSLFDHKALTLKSQKQVKVEMSGPVTVLTRQTTAAELDSHTPA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE2 LEQQTTSSEKTPTKRTAASVLNNFIESPSKLLDTPIKNLLDTPVKTQYDFPSCRCVGKCQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: .
CCDS47 LEQQTTSSEKTPTKRTAASVLNNFIESPSKLLDTPIKNLLDTPVKTQYDFPSCRCVEQII
1090 1100 1110 1120 1130 1140
1150 1160
pF1KE2 KCTE----TH-GVYPELANLSSDMGFSFFF
. : :: :. :..: . : :
CCDS47 EKDEGPFYTHLGAGPNVAAIREIMEERFGQKGKAIRIERVIYTGKEGKSSQGCPIAKWVV
1150 1160 1170 1180 1190 1200
1165 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 17:22:05 2016 done: Sun Nov 6 17:22:06 2016
Total Scan time: 4.850 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]