Result of FASTA (omim) for
pFN21AE2233
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2233, 662 aa
1>>>pF1KE2233 662 - 662 aa - 662 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9955+/-0.000357; mu= 17.0200+/- 0.023
mean_var=86.4676+/-17.395, 0's: 0 Z-trim(115.2): 32 B-trim: 230 in 1/56
Lambda= 0.137926
statistics sampled from 25467 (25490) to 25467 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.299), width: 16
Scan time: 8.220
The best scores are: opt bits E(85289)
NP_009133 (OMIM: 115080,604694) A-kinase anchor pr ( 662) 4333 872.4 0
XP_016879560 (OMIM: 115080,604694) PREDICTED: A-ki ( 644) 3998 805.7 0
NP_001317081 (OMIM: 115080,604694) A-kinase anchor ( 604) 3207 648.3 2.4e-185
>>NP_009133 (OMIM: 115080,604694) A-kinase anchor protei (662 aa)
initn: 4333 init1: 4333 opt: 4333 Z-score: 4659.0 bits: 872.4 E(85289): 0
Smith-Waterman score: 4333; 100.0% identity (100.0% similar) in 662 aa overlap (1-662:1-662)
10 20 30 40 50 60
pF1KE2 MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 ALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 SLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 SLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 SLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 ECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 ECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 TFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 RSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 RSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 AKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 AKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 RQAWTTMEKVFLPGFLSSNLYYKYLNDLIHSVRGDEFLGGNVSLTAPGSVGPPDESHPGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 RQAWTTMEKVFLPGFLSSNLYYKYLNDLIHSVRGDEFLGGNVSLTAPGSVGPPDESHPGS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 SDSSASQSSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 SDSSASQSSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 SEPEPDVRKSKGSMFSQAMKKWVQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 SEPEPDVRKSKGSMFSQAMKKWVQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKST
610 620 630 640 650 660
pF1KE2 KL
::
NP_009 KL
>>XP_016879560 (OMIM: 115080,604694) PREDICTED: A-kinase (644 aa)
initn: 3998 init1: 3998 opt: 3998 Z-score: 4298.9 bits: 805.7 E(85289): 0
Smith-Waterman score: 3998; 100.0% identity (100.0% similar) in 611 aa overlap (1-611:1-611)
10 20 30 40 50 60
pF1KE2 MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 SLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 ECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 RSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 AKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 RQAWTTMEKVFLPGFLSSNLYYKYLNDLIHSVRGDEFLGGNVSLTAPGSVGPPDESHPGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQAWTTMEKVFLPGFLSSNLYYKYLNDLIHSVRGDEFLGGNVSLTAPGSVGPPDESHPGS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 SDSSASQSSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDSSASQSSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 SEPEPDVRKSKGSMFSQAMKKWVQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKST
:::::::::::
XP_016 SEPEPDVRKSKVLALSPRPECSGLTAPHCNLCFLGSSDFPASSS
610 620 630 640
>>NP_001317081 (OMIM: 115080,604694) A-kinase anchor pro (604 aa)
initn: 3207 init1: 3207 opt: 3207 Z-score: 3448.7 bits: 648.3 E(85289): 2.4e-185
Smith-Waterman score: 3818; 91.2% identity (91.2% similar) in 662 aa overlap (1-662:1-604)
10 20 30 40 50 60
pF1KE2 MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 SLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 ECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 RSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 AKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 RQAWTTMEKVFLPGFLSSNLYYKYLNDLIHSVRGDEFLGGNVSLTAPGSVGPPDESHPGS
:::::::::
NP_001 RQAWTTMEK---------------------------------------------------
550 560 570 580 590 600
pF1KE2 SDSSASQSSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRE
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -------SSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRE
490 500 510 520 530 540
610 620 630 640 650 660
pF1KE2 SEPEPDVRKSKGSMFSQAMKKWVQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEPEPDVRKSKGSMFSQAMKKWVQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKST
550 560 570 580 590 600
pF1KE2 KL
::
NP_001 KL
662 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:06:20 2016 done: Mon Nov 7 01:06:21 2016
Total Scan time: 8.220 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]