Result of FASTA (omim) for
pFN21AE2227
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2227, 389 aa
1>>>pF1KE2227 389 - 389 aa - 389 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4817+/-0.000319; mu= 16.3682+/- 0.020
mean_var=74.3242+/-15.030, 0's: 0 Z-trim(116.9): 21 B-trim: 0 in 0/50
Lambda= 0.148768
statistics sampled from 28434 (28455) to 28434 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.334), width: 16
Scan time: 8.830
The best scores are: opt bits E(85289)
NP_640335 (OMIM: 611766,614947) methionyl-tRNA for ( 389) 2646 577.0 2.6e-164
XP_005254215 (OMIM: 611766,614947) PREDICTED: meth ( 440) 2142 468.9 1.1e-131
XP_016861103 (OMIM: 600249) PREDICTED: cytosolic 1 ( 828) 223 57.2 1.7e-07
XP_016861102 (OMIM: 600249) PREDICTED: cytosolic 1 ( 838) 223 57.2 1.7e-07
XP_011510657 (OMIM: 600249) PREDICTED: cytosolic 1 ( 902) 223 57.2 1.8e-07
XP_006713544 (OMIM: 600249) PREDICTED: cytosolic 1 ( 902) 223 57.2 1.8e-07
NP_036322 (OMIM: 600249) cytosolic 10-formyltetrah ( 902) 223 57.2 1.8e-07
NP_001257293 (OMIM: 600249) cytosolic 10-formyltet ( 912) 223 57.2 1.8e-07
XP_011536291 (OMIM: 613584) PREDICTED: mitochondri ( 516) 198 51.7 4.8e-06
XP_016874379 (OMIM: 613584) PREDICTED: mitochondri ( 517) 198 51.7 4.8e-06
XP_011536290 (OMIM: 613584) PREDICTED: mitochondri ( 622) 198 51.7 5.6e-06
NP_001029345 (OMIM: 613584) mitochondrial 10-formy ( 923) 198 51.8 7.7e-06
XP_011527828 (OMIM: 138440) PREDICTED: trifunction (1010) 158 43.3 0.0032
XP_006724053 (OMIM: 138440) PREDICTED: trifunction (1010) 158 43.3 0.0032
NP_000810 (OMIM: 138440) trifunctional purine bios (1010) 158 43.3 0.0032
NP_001129477 (OMIM: 138440) trifunctional purine b (1010) 158 43.3 0.0032
XP_006724052 (OMIM: 138440) PREDICTED: trifunction (1010) 158 43.3 0.0032
NP_001129478 (OMIM: 138440) trifunctional purine b (1010) 158 43.3 0.0032
XP_005260998 (OMIM: 138440) PREDICTED: trifunction (1010) 158 43.3 0.0032
>>NP_640335 (OMIM: 611766,614947) methionyl-tRNA formylt (389 aa)
initn: 2646 init1: 2646 opt: 2646 Z-score: 3070.9 bits: 577.0 E(85289): 2.6e-164
Smith-Waterman score: 2646; 100.0% identity (100.0% similar) in 389 aa overlap (1-389:1-389)
10 20 30 40 50 60
pF1KE2 MRVLVRRCWGPPLAHGARRGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_640 MRVLVRRCWGPPLAHGARRGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EALRALHAARENKEEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVYEWPDVGSGEYDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_640 EALRALHAARENKEEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVYEWPDVGSGEYDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GVVASFGRLLNEALILKFPYGILNVHPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_640 GVVASFGRLLNEALILKFPYGILNVHPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 RFDVGPILKQETVPVPPKSTAKELEAVLSRLGANMLISVLKNLPESLSNGRQQPMEGATY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_640 RFDVGPILKQETVPVPPKSTAKELEAVLSRLGANMLISVLKNLPESLSNGRQQPMEGATY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 APKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVEVNSSVLADPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_640 APKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVEVNSSVLADPK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 LTGQALIPGSVIYHKQSQILLVYCKDGWIGVRSVMLKKSLTATDFYNGYLHPWYQKNSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_640 LTGQALIPGSVIYHKQSQILLVYCKDGWIGVRSVMLKKSLTATDFYNGYLHPWYQKNSQA
310 320 330 340 350 360
370 380
pF1KE2 QPSQCRFQTLRLPTKKKQKKTVAMQQCIE
:::::::::::::::::::::::::::::
NP_640 QPSQCRFQTLRLPTKKKQKKTVAMQQCIE
370 380
>>XP_005254215 (OMIM: 611766,614947) PREDICTED: methiony (440 aa)
initn: 2134 init1: 2134 opt: 2142 Z-score: 2485.5 bits: 468.9 E(85289): 1.1e-131
Smith-Waterman score: 2388; 87.9% identity (87.9% similar) in 421 aa overlap (20-389:20-440)
10 20 30 40 50 60
pF1KE2 MRVLVRRCWGPPLAHGARRGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAR
:::::::::::::::::::::::::::::::::::::::::
XP_005 MRVLVRRCWGPPLAHGARRGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAR
10 20 30 40 50 60
70
pF1KE2 EALRALHAAR--------------------------------------------------
::::::::::
XP_005 EALRALHAARYPGQGSGDPAAEGLQAAPGRPAPRVLDFWLRKAWAAERCGPRSRRLLAPR
70 80 90 100 110 120
80 90 100 110 120
pF1KE2 -ENKEEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVYEWPDVGSGEYDVGVVASFGRL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RENKEEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVYEWPDVGSGEYDVGVVASFGRL
130 140 150 160 170 180
130 140 150 160 170 180
pF1KE2 LNEALILKFPYGILNVHPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPKRFDVGPILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNEALILKFPYGILNVHPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPKRFDVGPILK
190 200 210 220 230 240
190 200 210 220 230 240
pF1KE2 QETVPVPPKSTAKELEAVLSRLGANMLISVLKNLPESLSNGRQQPMEGATYAPKISAGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QETVPVPPKSTAKELEAVLSRLGANMLISVLKNLPESLSNGRQQPMEGATYAPKISAGTS
250 260 270 280 290 300
250 260 270 280 290 300
pF1KE2 CIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVEVNSSVLADPKLTGQALIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVEVNSSVLADPKLTGQALIPG
310 320 330 340 350 360
310 320 330 340 350 360
pF1KE2 SVIYHKQSQILLVYCKDGWIGVRSVMLKKSLTATDFYNGYLHPWYQKNSQAQPSQCRFQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVIYHKQSQILLVYCKDGWIGVRSVMLKKSLTATDFYNGYLHPWYQKNSQAQPSQCRFQT
370 380 390 400 410 420
370 380
pF1KE2 LRLPTKKKQKKTVAMQQCIE
::::::::::::::::::::
XP_005 LRLPTKKKQKKTVAMQQCIE
430 440
>>XP_016861103 (OMIM: 600249) PREDICTED: cytosolic 10-fo (828 aa)
initn: 162 init1: 135 opt: 223 Z-score: 255.5 bits: 57.2 E(85289): 1.7e-07
Smith-Waterman score: 244; 26.6% identity (53.5% similar) in 327 aa overlap (49-348:2-308)
20 30 40 50 60 70
pF1KE2 RGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAREALRALHAARENKEEELI
.. .: . :..:. : .:..:
XP_016 MKIAVIGQSLFGQEVY--CHLRKEGHEV---
10 20
80 90 100 110 120 130
pF1KE2 DKLEVVTMPSPSPKGLPVKQYAVQSQLPVYE---WPDVGSGEYDVGVVASFGRLLNEALI
. : :.:. . :. :. : .. .::.. : :.. :: ::.. : : .
XP_016 --VGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDV--VAKYQALGAELNV
30 40 50 60 70 80
140 150 160 170 180
pF1KE2 LKF-----PYGILNV--------HPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPKRF
: : :. :... ::: ::: :: . . :..::: : .:. .
XP_016 LPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWA-DDGL
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE2 DVGPILKQETVPVPPKSTAKEL-EAVLSRLGANMLISVLKNLPESLSNGRQQPMEGATYA
:.: .: :. : : .:.. : . : : . ...... . :. . :: :::::
XP_016 DTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEEGATYE
150 160 170 180 190 200
250 260 270 280 290
pF1KE2 PKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVE--VNSSVLADP
. :. :.:. : .: : :. .. .: : . : . . .:.: :. :
XP_016 GIQKKETAKINWD-QPAEAIHNWIRG-NDKVP--GAWTEACEQKLTFFNSTLNTSGLV-P
210 220 230 240 250
300 310 320 330 340 350
pF1KE2 KLTGQAL-IPGSVIYHK-----QSQILLVYCKDGWIGVRSVMLK--KSLTATDFYNGYLH
. :.:: :::. :. .. ..: : . :....:. : . :..:..:
XP_016 E--GDALPIPGA---HRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGAAS
260 270 280 290 300 310
360 370 380
pF1KE2 PWYQKNSQAQPSQCRFQTLRLPTKKKQKKTVAMQQCIE
XP_016 SVLELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGL
320 330 340 350 360 370
>>XP_016861102 (OMIM: 600249) PREDICTED: cytosolic 10-fo (838 aa)
initn: 162 init1: 135 opt: 223 Z-score: 255.4 bits: 57.2 E(85289): 1.7e-07
Smith-Waterman score: 249; 26.8% identity (53.3% similar) in 332 aa overlap (46-348:7-318)
20 30 40 50 60 70
pF1KE2 GARRGRPSPQWRALARLGWEDCRDSRVREKPP--WRVLFFGTDQFAREALRALHAARENK
:: .. .: . :..:. : .:..
XP_016 MAGPSNPPATMKIAVIGQSLFGQEVY--CHLRKEGH
10 20 30
80 90 100 110 120 130
pF1KE2 EEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVYE---WPDVGSGEYDVGVVASFGRLL
: . : :.:. . :. :. : .. .::.. : :.. :: ::.. :
XP_016 EV-----VGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDV--VAKYQALG
40 50 60 70 80
140 150 160 170
pF1KE2 NEALILKF-----PYGILNV--------HPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQI
: .: : :. :... ::: ::: :: . . :..::: : .:.
XP_016 AELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWA
90 100 110 120 130 140
180 190 200 210 220 230
pF1KE2 RPKRFDVGPILKQETVPVPPKSTAKEL-EAVLSRLGANMLISVLKNLPESLSNGRQQPME
.:.: .: :. : : .:.. : . : : . ...... . :. . :: :
XP_016 -DDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEE
150 160 170 180 190 200
240 250 260 270 280 290
pF1KE2 GATYAPKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVE--VNSS
:::: . :. :.:. : .: : :. .. .: : . : . . .:.:
XP_016 GATYEGIQKKETAKINWD-QPAEAIHNWIRG-NDKVP--GAWTEACEQKLTFFNSTLNTS
210 220 230 240 250 260
300 310 320 330 340
pF1KE2 VLADPKLTGQAL-IPGSVIYHK-----QSQILLVYCKDGWIGVRSVMLK--KSLTATDFY
:. :. :.:: :::. :. .. ..: : . :....:. : . :..:.
XP_016 GLV-PE--GDALPIPGA---HRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFF
270 280 290 300 310
350 360 370 380
pF1KE2 NGYLHPWYQKNSQAQPSQCRFQTLRLPTKKKQKKTVAMQQCIE
.:
XP_016 KGAASSVLELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKE
320 330 340 350 360 370
>>XP_011510657 (OMIM: 600249) PREDICTED: cytosolic 10-fo (902 aa)
initn: 135 init1: 135 opt: 223 Z-score: 255.0 bits: 57.2 E(85289): 1.8e-07
Smith-Waterman score: 244; 26.6% identity (53.5% similar) in 327 aa overlap (49-348:2-308)
20 30 40 50 60 70
pF1KE2 RGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAREALRALHAARENKEEELI
.. .: . :..:. : .:..:
XP_011 MKIAVIGQSLFGQEVY--CHLRKEGHEV---
10 20
80 90 100 110 120 130
pF1KE2 DKLEVVTMPSPSPKGLPVKQYAVQSQLPVYE---WPDVGSGEYDVGVVASFGRLLNEALI
. : :.:. . :. :. : .. .::.. : :.. :: ::.. : : .
XP_011 --VGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDV--VAKYQALGAELNV
30 40 50 60 70 80
140 150 160 170 180
pF1KE2 LKF-----PYGILNV--------HPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPKRF
: : :. :... ::: ::: :: . . :..::: : .:. .
XP_011 LPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWA-DDGL
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE2 DVGPILKQETVPVPPKSTAKEL-EAVLSRLGANMLISVLKNLPESLSNGRQQPMEGATYA
:.: .: :. : : .:.. : . : : . ...... . :. . :: :::::
XP_011 DTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEEGATYE
150 160 170 180 190 200
250 260 270 280 290
pF1KE2 PKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVE--VNSSVLADP
. :. :.:. : .: : :. .. .: : . : . . .:.: :. :
XP_011 GIQKKETAKINWD-QPAEAIHNWIRG-NDKVP--GAWTEACEQKLTFFNSTLNTSGLV-P
210 220 230 240 250
300 310 320 330 340 350
pF1KE2 KLTGQAL-IPGSVIYHK-----QSQILLVYCKDGWIGVRSVMLK--KSLTATDFYNGYLH
. :.:: :::. :. .. ..: : . :....:. : . :..:..:
XP_011 E--GDALPIPGA---HRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGAAS
260 270 280 290 300 310
360 370 380
pF1KE2 PWYQKNSQAQPSQCRFQTLRLPTKKKQKKTVAMQQCIE
XP_011 SVLELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGL
320 330 340 350 360 370
>>XP_006713544 (OMIM: 600249) PREDICTED: cytosolic 10-fo (902 aa)
initn: 135 init1: 135 opt: 223 Z-score: 255.0 bits: 57.2 E(85289): 1.8e-07
Smith-Waterman score: 244; 26.6% identity (53.5% similar) in 327 aa overlap (49-348:2-308)
20 30 40 50 60 70
pF1KE2 RGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAREALRALHAARENKEEELI
.. .: . :..:. : .:..:
XP_006 MKIAVIGQSLFGQEVY--CHLRKEGHEV---
10 20
80 90 100 110 120 130
pF1KE2 DKLEVVTMPSPSPKGLPVKQYAVQSQLPVYE---WPDVGSGEYDVGVVASFGRLLNEALI
. : :.:. . :. :. : .. .::.. : :.. :: ::.. : : .
XP_006 --VGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDV--VAKYQALGAELNV
30 40 50 60 70 80
140 150 160 170 180
pF1KE2 LKF-----PYGILNV--------HPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPKRF
: : :. :... ::: ::: :: . . :..::: : .:. .
XP_006 LPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWA-DDGL
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE2 DVGPILKQETVPVPPKSTAKEL-EAVLSRLGANMLISVLKNLPESLSNGRQQPMEGATYA
:.: .: :. : : .:.. : . : : . ...... . :. . :: :::::
XP_006 DTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEEGATYE
150 160 170 180 190 200
250 260 270 280 290
pF1KE2 PKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVE--VNSSVLADP
. :. :.:. : .: : :. .. .: : . : . . .:.: :. :
XP_006 GIQKKETAKINWD-QPAEAIHNWIRG-NDKVP--GAWTEACEQKLTFFNSTLNTSGLV-P
210 220 230 240 250
300 310 320 330 340 350
pF1KE2 KLTGQAL-IPGSVIYHK-----QSQILLVYCKDGWIGVRSVMLK--KSLTATDFYNGYLH
. :.:: :::. :. .. ..: : . :....:. : . :..:..:
XP_006 E--GDALPIPGA---HRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGAAS
260 270 280 290 300 310
360 370 380
pF1KE2 PWYQKNSQAQPSQCRFQTLRLPTKKKQKKTVAMQQCIE
XP_006 SVLELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGL
320 330 340 350 360 370
>>NP_036322 (OMIM: 600249) cytosolic 10-formyltetrahydro (902 aa)
initn: 135 init1: 135 opt: 223 Z-score: 255.0 bits: 57.2 E(85289): 1.8e-07
Smith-Waterman score: 244; 26.6% identity (53.5% similar) in 327 aa overlap (49-348:2-308)
20 30 40 50 60 70
pF1KE2 RGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAREALRALHAARENKEEELI
.. .: . :..:. : .:..:
NP_036 MKIAVIGQSLFGQEVY--CHLRKEGHEV---
10 20
80 90 100 110 120 130
pF1KE2 DKLEVVTMPSPSPKGLPVKQYAVQSQLPVYE---WPDVGSGEYDVGVVASFGRLLNEALI
. : :.:. . :. :. : .. .::.. : :.. :: ::.. : : .
NP_036 --VGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDV--VAKYQALGAELNV
30 40 50 60 70 80
140 150 160 170 180
pF1KE2 LKF-----PYGILNV--------HPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPKRF
: : :. :... ::: ::: :: . . :..::: : .:. .
NP_036 LPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWA-DDGL
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE2 DVGPILKQETVPVPPKSTAKEL-EAVLSRLGANMLISVLKNLPESLSNGRQQPMEGATYA
:.: .: :. : : .:.. : . : : . ...... . :. . :: :::::
NP_036 DTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEEGATYE
150 160 170 180 190 200
250 260 270 280 290
pF1KE2 PKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVE--VNSSVLADP
. :. :.:. : .: : :. .. .: : . : . . .:.: :. :
NP_036 GIQKKETAKINWD-QPAEAIHNWIRG-NDKVP--GAWTEACEQKLTFFNSTLNTSGLV-P
210 220 230 240 250
300 310 320 330 340 350
pF1KE2 KLTGQAL-IPGSVIYHK-----QSQILLVYCKDGWIGVRSVMLK--KSLTATDFYNGYLH
. :.:: :::. :. .. ..: : . :....:. : . :..:..:
NP_036 E--GDALPIPGA---HRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGAAS
260 270 280 290 300 310
360 370 380
pF1KE2 PWYQKNSQAQPSQCRFQTLRLPTKKKQKKTVAMQQCIE
NP_036 SVLELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGL
320 330 340 350 360 370
>>NP_001257293 (OMIM: 600249) cytosolic 10-formyltetrahy (912 aa)
initn: 135 init1: 135 opt: 223 Z-score: 254.9 bits: 57.2 E(85289): 1.8e-07
Smith-Waterman score: 249; 26.8% identity (53.3% similar) in 332 aa overlap (46-348:7-318)
20 30 40 50 60 70
pF1KE2 GARRGRPSPQWRALARLGWEDCRDSRVREKPP--WRVLFFGTDQFAREALRALHAARENK
:: .. .: . :..:. : .:..
NP_001 MAGPSNPPATMKIAVIGQSLFGQEVY--CHLRKEGH
10 20 30
80 90 100 110 120 130
pF1KE2 EEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVYE---WPDVGSGEYDVGVVASFGRLL
: . : :.:. . :. :. : .. .::.. : :.. :: ::.. :
NP_001 EV-----VGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDV--VAKYQALG
40 50 60 70 80
140 150 160 170
pF1KE2 NEALILKF-----PYGILNV--------HPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQI
: .: : :. :... ::: ::: :: . . :..::: : .:.
NP_001 AELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWA
90 100 110 120 130 140
180 190 200 210 220 230
pF1KE2 RPKRFDVGPILKQETVPVPPKSTAKEL-EAVLSRLGANMLISVLKNLPESLSNGRQQPME
.:.: .: :. : : .:.. : . : : . ...... . :. . :: :
NP_001 -DDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEE
150 160 170 180 190 200
240 250 260 270 280 290
pF1KE2 GATYAPKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVE--VNSS
:::: . :. :.:. : .: : :. .. .: : . : . . .:.:
NP_001 GATYEGIQKKETAKINWD-QPAEAIHNWIRG-NDKVP--GAWTEACEQKLTFFNSTLNTS
210 220 230 240 250 260
300 310 320 330 340
pF1KE2 VLADPKLTGQAL-IPGSVIYHK-----QSQILLVYCKDGWIGVRSVMLK--KSLTATDFY
:. :. :.:: :::. :. .. ..: : . :....:. : . :..:.
NP_001 GLV-PE--GDALPIPGA---HRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFF
270 280 290 300 310
350 360 370 380
pF1KE2 NGYLHPWYQKNSQAQPSQCRFQTLRLPTKKKQKKTVAMQQCIE
.:
NP_001 KGAASSVLELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKE
320 330 340 350 360 370
>>XP_011536291 (OMIM: 613584) PREDICTED: mitochondrial 1 (516 aa)
initn: 112 init1: 112 opt: 198 Z-score: 229.5 bits: 51.7 E(85289): 4.8e-06
Smith-Waterman score: 225; 24.2% identity (52.5% similar) in 326 aa overlap (41-347:16-328)
20 30 40 50 60 70
pF1KE2 PPLAHGARRGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAREALRALHAAR
:: : .. ..: . :..:. :.
XP_011 MLRRGSQALRRFSTGRVYFKNKLKLALIGQSLFGQEVYSHLR---
10 20 30 40
80 90 100 110 120
pF1KE2 ENKEEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVYEWP----------DVGSGEYDV
:: . . . : :.:. . :. :. : .. ::.. : .:. . .:
XP_011 --KEGHRV--VGVFTVPDKDGKADPLALAAEKDGTPVFKLPKWRVKGKTIKEVAEAYRSV
50 60 70 80 90
130 140 150 160 170
pF1KE2 GV---VASFGRLLNEALILKFP-YGILNVHPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQ
:. : : . :. : .: . ::: ::: :: . . :.. :: .: ...
XP_011 GAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPRHRGASAINWTLIMGDKKAGFSVFW
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE2 IRPKRFDVGPILKQETVPVPPKSTAKEL-EAVLSRLGANMLISVLKNLPESLSNGRQQPM
.:.:::: :.. : :..:. : . : : . .. ... . .. . ::
XP_011 A-DDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEGIKAMVEAVQLIADGKAPRIPQPE
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE2 EGATYAPKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVEVNSSV
::::: . .. :.:. :..: . :. .. : .. . . . .::::
XP_011 EGATYEGIQKKENAEISWD-QSAEVLHNWIRGHDKVPGAWTEINGQMVTFYGSTLLNSSV
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE2 L-ADPKLTGQALIPGSVIYHKQSQILLVYCKDGW-IGVRSVMLK--KSLTATDFYNGYLH
..: : :: : . :... .:: . ::..... : . :.....
XP_011 PPGEPLEIKGAKKPGLVTKNG----LVLFGNDGKALTVRNLQFEDGKMIPASQYFSTGET
280 290 300 310 320 330
360 370 380
pF1KE2 PWYQKNSQAQPSQCRFQTLRLPTKKKQKKTVAMQQCIE
XP_011 SVVELTAEEVKVAETIKVIWAGILSNVPIIEDSTDFFKSGASSMDVARLVEEIRQKCGGL
340 350 360 370 380 390
>>XP_016874379 (OMIM: 613584) PREDICTED: mitochondrial 1 (517 aa)
initn: 112 init1: 112 opt: 198 Z-score: 229.5 bits: 51.7 E(85289): 4.8e-06
Smith-Waterman score: 225; 24.2% identity (52.5% similar) in 326 aa overlap (41-347:16-328)
20 30 40 50 60 70
pF1KE2 PPLAHGARRGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAREALRALHAAR
:: : .. ..: . :..:. :.
XP_016 MLRRGSQALRRFSTGRVYFKNKLKLALIGQSLFGQEVYSHLR---
10 20 30 40
80 90 100 110 120
pF1KE2 ENKEEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVYEWP----------DVGSGEYDV
:: . . . : :.:. . :. :. : .. ::.. : .:. . .:
XP_016 --KEGHRV--VGVFTVPDKDGKADPLALAAEKDGTPVFKLPKWRVKGKTIKEVAEAYRSV
50 60 70 80 90
130 140 150 160 170
pF1KE2 GV---VASFGRLLNEALILKFP-YGILNVHPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQ
:. : : . :. : .: . ::: ::: :: . . :.. :: .: ...
XP_016 GAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPRHRGASAINWTLIMGDKKAGFSVFW
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE2 IRPKRFDVGPILKQETVPVPPKSTAKEL-EAVLSRLGANMLISVLKNLPESLSNGRQQPM
.:.:::: :.. : :..:. : . : : . .. ... . .. . ::
XP_016 A-DDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEGIKAMVEAVQLIADGKAPRIPQPE
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE2 EGATYAPKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVEVNSSV
::::: . .. :.:. :..: . :. .. : .. . . . .::::
XP_016 EGATYEGIQKKENAEISWD-QSAEVLHNWIRGHDKVPGAWTEINGQMVTFYGSTLLNSSV
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE2 L-ADPKLTGQALIPGSVIYHKQSQILLVYCKDGW-IGVRSVMLK--KSLTATDFYNGYLH
..: : :: : . :... .:: . ::..... : . :.....
XP_016 PPGEPLEIKGAKKPGLVTKNG----LVLFGNDGKALTVRNLQFEDGKMIPASQYFSTGET
280 290 300 310 320 330
360 370 380
pF1KE2 PWYQKNSQAQPSQCRFQTLRLPTKKKQKKTVAMQQCIE
XP_016 SVVELTAEEVKVAETIKVIWAGILSNVPIIEDSTDFFKSGASSMDVARLVEEIRQKCGGL
340 350 360 370 380 390
389 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 10:42:15 2016 done: Sun Nov 6 10:42:16 2016
Total Scan time: 8.830 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]