Result of FASTA (omim) for
pFN21AE2185
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2185, 282 aa
1>>>pF1KE2185 282 - 282 aa - 282 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9238+/-0.000517; mu= 12.3238+/- 0.032
mean_var=114.7386+/-22.763, 0's: 0 Z-trim(109.3): 209 B-trim: 301 in 1/57
Lambda= 0.119735
statistics sampled from 17245 (17490) to 17245 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.554), E-opt: 0.2 (0.205), width: 16
Scan time: 6.760
The best scores are: opt bits E(85289)
NP_078902 (OMIM: 608162) V-set domain-containing T ( 282) 1808 323.8 2.3e-88
XP_011540445 (OMIM: 608162) PREDICTED: V-set domai ( 332) 1738 311.8 1.1e-84
XP_016857824 (OMIM: 608162) PREDICTED: V-set domai ( 287) 1733 310.9 1.8e-84
NP_001240778 (OMIM: 608162) V-set domain-containin ( 187) 1206 219.6 3.4e-57
NP_001240779 (OMIM: 608162) V-set domain-containin ( 166) 870 161.6 9.3e-40
NP_001316557 (OMIM: 605715) CD276 antigen isoform ( 316) 335 69.4 9.7e-12
NP_079516 (OMIM: 605715) CD276 antigen isoform b p ( 316) 335 69.4 9.7e-12
NP_001316558 (OMIM: 605715) CD276 antigen isoform ( 388) 325 67.8 3.7e-11
XP_011520398 (OMIM: 605715) PREDICTED: CD276 antig ( 534) 325 67.9 4.7e-11
XP_016878127 (OMIM: 605715) PREDICTED: CD276 antig ( 534) 325 67.9 4.7e-11
XP_011520397 (OMIM: 605715) PREDICTED: CD276 antig ( 534) 325 67.9 4.7e-11
NP_001019907 (OMIM: 605715) CD276 antigen isoform ( 534) 325 67.9 4.7e-11
XP_005254757 (OMIM: 605715) PREDICTED: CD276 antig ( 534) 325 67.9 4.7e-11
NP_932079 (OMIM: 606192) butyrophilin-like protein ( 466) 308 64.9 3.2e-10
XP_016865705 (OMIM: 613594) PREDICTED: butyrophili ( 225) 299 63.1 5.7e-10
XP_005248889 (OMIM: 613594) PREDICTED: butyrophili ( 267) 299 63.1 6.4e-10
XP_005248888 (OMIM: 613594) PREDICTED: butyrophili ( 267) 299 63.1 6.4e-10
XP_011510669 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 379) 298 63.1 9.2e-10
NP_001269487 (OMIM: 604371) HERV-H LTR-associating ( 397) 298 63.1 9.6e-10
XP_016861131 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 414) 298 63.1 9.8e-10
XP_005247137 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 414) 298 63.1 9.8e-10
NP_009003 (OMIM: 604371) HERV-H LTR-associating pr ( 414) 298 63.1 9.8e-10
NP_001269485 (OMIM: 604371) HERV-H LTR-associating ( 414) 298 63.1 9.8e-10
NP_001269486 (OMIM: 604371) HERV-H LTR-associating ( 414) 298 63.1 9.8e-10
XP_011510665 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 425) 298 63.1 1e-09
XP_011510664 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 425) 298 63.1 1e-09
XP_011510666 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 425) 298 63.1 1e-09
NP_919423 (OMIM: 613593) butyrophilin subfamily 3 ( 352) 290 61.7 2.3e-09
XP_005248891 (OMIM: 613593) PREDICTED: butyrophili ( 352) 290 61.7 2.3e-09
NP_001138481 (OMIM: 613593) butyrophilin subfamily ( 378) 290 61.7 2.4e-09
XP_005248890 (OMIM: 613593) PREDICTED: butyrophili ( 506) 290 61.8 3e-09
NP_008979 (OMIM: 613593) butyrophilin subfamily 3 ( 513) 290 61.8 3e-09
NP_001153180 (OMIM: 615606) butyrophilin-like prot ( 340) 285 60.8 4.1e-09
NP_079126 (OMIM: 615606) butyrophilin-like protein ( 347) 285 60.8 4.1e-09
NP_001723 (OMIM: 601610) butyrophilin subfamily 1 ( 526) 287 61.3 4.4e-09
XP_005249397 (OMIM: 601610) PREDICTED: butyrophili ( 626) 287 61.4 4.9e-09
XP_011532951 (OMIM: 615606) PREDICTED: butyrophili ( 462) 285 60.9 5e-09
NP_001035552 (OMIM: 615606) butyrophilin-like prot ( 500) 285 61.0 5.3e-09
XP_016865703 (OMIM: 613594) PREDICTED: butyrophili ( 292) 281 60.1 5.9e-09
NP_001184178 (OMIM: 613594) butyrophilin subfamily ( 292) 281 60.1 5.9e-09
XP_016865702 (OMIM: 613594) PREDICTED: butyrophili ( 297) 281 60.1 6e-09
XP_011512571 (OMIM: 613594) PREDICTED: butyrophili ( 297) 281 60.1 6e-09
XP_006715045 (OMIM: 613594) PREDICTED: butyrophili ( 297) 281 60.1 6e-09
NP_001184177 (OMIM: 613594) butyrophilin subfamily ( 311) 281 60.1 6.2e-09
NP_001184175 (OMIM: 613594) butyrophilin subfamily ( 334) 281 60.1 6.5e-09
XP_005248884 (OMIM: 613594) PREDICTED: butyrophili ( 334) 281 60.1 6.5e-09
NP_008978 (OMIM: 613594) butyrophilin subfamily 3 ( 334) 281 60.1 6.5e-09
XP_016865700 (OMIM: 613594) PREDICTED: butyrophili ( 334) 281 60.1 6.5e-09
XP_016865701 (OMIM: 613594) PREDICTED: butyrophili ( 334) 281 60.1 6.5e-09
NP_001184176 (OMIM: 613594) butyrophilin subfamily ( 334) 281 60.1 6.5e-09
>>NP_078902 (OMIM: 608162) V-set domain-containing T-cel (282 aa)
initn: 1808 init1: 1808 opt: 1808 Z-score: 1707.5 bits: 323.8 E(85289): 2.3e-88
Smith-Waterman score: 1808; 100.0% identity (100.0% similar) in 282 aa overlap (1-282:1-282)
10 20 30 40 50 60
pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 QLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 WASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 WASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKV
190 200 210 220 230 240
250 260 270 280
pF1KE2 TESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
::::::::::::::::::::::::::::::::::::::::::
NP_078 TESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
250 260 270 280
>>XP_011540445 (OMIM: 608162) PREDICTED: V-set domain-co (332 aa)
initn: 1738 init1: 1738 opt: 1738 Z-score: 1641.3 bits: 311.8 E(85289): 1.1e-84
Smith-Waterman score: 1738; 100.0% identity (100.0% similar) in 272 aa overlap (11-282:61-332)
10 20 30 40
pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVT
::::::::::::::::::::::::::::::
XP_011 FSTMGSVMLLKESCGNVFFSAVRIRRSRKHSIISIIIILAGAIALIIGFGISGRHSITVT
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE2 TVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGR
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE2 TAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYN
160 170 180 190 200 210
170 180 190 200 210 220
pF1KE2 ASSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTIN
220 230 240 250 260 270
230 240 250 260 270 280
pF1KE2 NTYSCMIENDIAKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTYSCMIENDIAKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLM
280 290 300 310 320 330
pF1KE2 LK
::
XP_011 LK
>>XP_016857824 (OMIM: 608162) PREDICTED: V-set domain-co (287 aa)
initn: 1733 init1: 1733 opt: 1733 Z-score: 1637.4 bits: 310.9 E(85289): 1.8e-84
Smith-Waterman score: 1733; 100.0% identity (100.0% similar) in 271 aa overlap (12-282:17-287)
10 20 30 40 50
pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILS
::::::::::::::::::::::::::::::::::::::::::::
XP_016 MECLFPLAKKRDTPHRIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 CTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 RLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE2 QPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKAT
190 200 210 220 230 240
240 250 260 270 280
pF1KE2 GDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
:::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
250 260 270 280
>>NP_001240778 (OMIM: 608162) V-set domain-containing T- (187 aa)
initn: 1206 init1: 1206 opt: 1206 Z-score: 1147.8 bits: 219.6 E(85289): 3.4e-57
Smith-Waterman score: 1206; 100.0% identity (100.0% similar) in 187 aa overlap (96-282:1-187)
70 80 90 100 110 120
pF1KE2 DIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDA
::::::::::::::::::::::::::::::
NP_001 MFRGRTAVFADQVIVGNASLRLKNVQLTDA
10 20 30
130 140 150 160 170 180
pF1KE2 GTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVVWASQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVVWASQV
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE2 DQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKVTESEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKVTESEI
100 110 120 130 140 150
250 260 270 280
pF1KE2 KRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
:::::::::::::::::::::::::::::::::::::
NP_001 KRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
160 170 180
>>NP_001240779 (OMIM: 608162) V-set domain-containing T- (166 aa)
initn: 870 init1: 870 opt: 870 Z-score: 834.8 bits: 161.6 E(85289): 9.3e-40
Smith-Waterman score: 870; 90.7% identity (92.7% similar) in 151 aa overlap (132-282:16-166)
110 120 130 140 150 160
pF1KE2 AVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNA
:: : . . .:::::::::::::
NP_001 MASLGQILFWSIISIIIILAGAIALIIGFGISAFSMPEVNVDYNA
10 20 30 40
170 180 190 200 210 220
pF1KE2 SSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINN
50 60 70 80 90 100
230 240 250 260 270 280
pF1KE2 TYSCMIENDIAKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TYSCMIENDIAKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLML
110 120 130 140 150 160
pF1KE2 K
:
NP_001 K
>>NP_001316557 (OMIM: 605715) CD276 antigen isoform b pr (316 aa)
initn: 224 init1: 119 opt: 335 Z-score: 331.8 bits: 69.4 E(85289): 9.7e-12
Smith-Waterman score: 335; 29.8% identity (58.7% similar) in 235 aa overlap (18-241:12-238)
10 20 30 40 50
pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--
. .:: . : ..: . : .. .: :. : :.:
NP_001 MLRRRGSPGMGVHVGAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSP
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK
:: ..:... . : . ::: : ::.: : . .:::.: : . :::::::.
NP_001 EPGFSLAQLNLIWQLTDTKQLVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NVQLTDAGTYKCYIITSKGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPR
:...: :.. :.. . . :.: . ...: .: : .... : ... :. : . :
NP_001 RVRVADEGSFTCFV-SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYR
120 130 140 150 160
180 190 200 210 220 230
pF1KE2 WFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDI
.:. : : : ::. .. .:: .. .:. . : ::: : :.::::...: .
NP_001 GYPEAEVFW--QDGQGVPLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPV
170 180 190 200 210 220
240 250 260 270 280
pF1KE2 AK--ATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
. : :.. .:
NP_001 LQQDAHGSVTITGQPMTFPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAE
230 240 250 260 270 280
>>NP_079516 (OMIM: 605715) CD276 antigen isoform b precu (316 aa)
initn: 224 init1: 119 opt: 335 Z-score: 331.8 bits: 69.4 E(85289): 9.7e-12
Smith-Waterman score: 335; 29.8% identity (58.7% similar) in 235 aa overlap (18-241:12-238)
10 20 30 40 50
pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--
. .:: . : ..: . : .. .: :. : :.:
NP_079 MLRRRGSPGMGVHVGAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSP
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK
:: ..:... . : . ::: : ::.: : . .:::.: : . :::::::.
NP_079 EPGFSLAQLNLIWQLTDTKQLVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NVQLTDAGTYKCYIITSKGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPR
:...: :.. :.. . . :.: . ...: .: : .... : ... :. : . :
NP_079 RVRVADEGSFTCFV-SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYR
120 130 140 150 160
180 190 200 210 220 230
pF1KE2 WFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDI
.:. : : : ::. .. .:: .. .:. . : ::: : :.::::...: .
NP_079 GYPEAEVFW--QDGQGVPLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPV
170 180 190 200 210 220
240 250 260 270 280
pF1KE2 AK--ATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
. : :.. .:
NP_079 LQQDAHGSVTITGQPMTFPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAE
230 240 250 260 270 280
>>NP_001316558 (OMIM: 605715) CD276 antigen isoform c [H (388 aa)
initn: 225 init1: 119 opt: 325 Z-score: 321.3 bits: 67.8 E(85289): 3.7e-11
Smith-Waterman score: 325; 31.7% identity (61.0% similar) in 205 aa overlap (48-241:114-310)
20 30 40 50 60 70
pF1KE2 ILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--EPDIKLSDIVIQWLKEG
.: :. : :.: :: ..:... . :
NP_001 DAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTD
90 100 110 120 130 140
80 90 100 110 120 130
pF1KE2 VLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITS
. ::: : ::.: : . .:::.: : . :::::::. :...: :.. :.. .
NP_001 TKQLVHSFTEGRD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFV-SI
150 160 170 180 190
140 150 160 170 180
pF1KE2 KGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPRWFPQPTVVWASQVDQGA
. :.: . ...: .: : .... : ... :. : . : .:. : : : ::.
NP_001 RDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFW--QDGQGV
200 210 220 230 240 250
190 200 210 220 230 240
pF1KE2 NFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDIAK--ATGDIKVTESEIK
.. .:: .. .:. . : ::: : :.::::...: . . : :.. .:
NP_001 PLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMT
260 270 280 290 300 310
250 260 270 280
pF1KE2 RRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
NP_001 FPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAEDQDGEGEGSKTALQPLK
320 330 340 350 360 370
>>XP_011520398 (OMIM: 605715) PREDICTED: CD276 antigen i (534 aa)
initn: 329 init1: 119 opt: 325 Z-score: 319.5 bits: 67.9 E(85289): 4.7e-11
Smith-Waterman score: 325; 31.7% identity (61.0% similar) in 205 aa overlap (48-241:260-456)
20 30 40 50 60 70
pF1KE2 ILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--EPDIKLSDIVIQWLKEG
.: :. : :.: :: ..:... . :
XP_011 DAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTD
230 240 250 260 270 280
80 90 100 110 120 130
pF1KE2 VLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITS
. ::: : ::.: : . .:::.: : . :::::::. :...: :.. :.. .
XP_011 TKQLVHSFTEGRD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFV-SI
290 300 310 320 330 340
140 150 160 170 180
pF1KE2 KGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPRWFPQPTVVWASQVDQGA
. :.: . ...: .: : .... : ... :. : . : .:. : : : ::.
XP_011 RDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFW--QDGQGV
350 360 370 380 390 400
190 200 210 220 230 240
pF1KE2 NFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDIAK--ATGDIKVTESEIK
.. .:: .. .:. . : ::: : :.::::...: . . : :.. .:
XP_011 PLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMT
410 420 430 440 450 460
250 260 270 280
pF1KE2 RRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
XP_011 FPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAEDQDGEGEGSKTALQPLK
470 480 490 500 510 520
>--
initn: 239 init1: 119 opt: 323 Z-score: 317.7 bits: 67.6 E(85289): 5.9e-11
Smith-Waterman score: 323; 28.8% identity (58.4% similar) in 233 aa overlap (18-241:12-236)
10 20 30 40 50
pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--
. .:: . : ..: . : .. .: :. : :.:
XP_011 MLRRRGSPGMGVHVGAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSP
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK
:: ..:... . : . ::: : ::.: : . .:::.: : . :::::::.
XP_011 EPGFSLAQLNLIWQLTDTKQLVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NVQLTDAGTYKCYIITSKGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPR
:...: :.. :.. . . :.: . ...: .: : .... : ... :. : . .
XP_011 RVRVADEGSFTCFV-SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYQ
120 130 140 150 160
180 190 200 210 220 230
pF1KE2 WFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDI
.:. : : : ::. .. .:: .. .:. . : :.: : :.::::...: .
XP_011 GYPEAEVFW--QDGQGVPLTGNVTTS-QMANEQGLFDVHSILRVVLGANGTYSCLVRNPV
170 180 190 200 210 220
240 250 260 270 280
pF1KE2 AKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
. . .::
XP_011 LQQDAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQ
230 240 250 260 270 280
>>XP_016878127 (OMIM: 605715) PREDICTED: CD276 antigen i (534 aa)
initn: 329 init1: 119 opt: 325 Z-score: 319.5 bits: 67.9 E(85289): 4.7e-11
Smith-Waterman score: 325; 31.7% identity (61.0% similar) in 205 aa overlap (48-241:260-456)
20 30 40 50 60 70
pF1KE2 ILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--EPDIKLSDIVIQWLKEG
.: :. : :.: :: ..:... . :
XP_016 DAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTD
230 240 250 260 270 280
80 90 100 110 120 130
pF1KE2 VLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITS
. ::: : ::.: : . .:::.: : . :::::::. :...: :.. :.. .
XP_016 TKQLVHSFTEGRD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFV-SI
290 300 310 320 330 340
140 150 160 170 180
pF1KE2 KGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPRWFPQPTVVWASQVDQGA
. :.: . ...: .: : .... : ... :. : . : .:. : : : ::.
XP_016 RDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFW--QDGQGV
350 360 370 380 390 400
190 200 210 220 230 240
pF1KE2 NFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDIAK--ATGDIKVTESEIK
.. .:: .. .:. . : ::: : :.::::...: . . : :.. .:
XP_016 PLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMT
410 420 430 440 450 460
250 260 270 280
pF1KE2 RRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
XP_016 FPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAEDQDGEGEGSKTALQPLK
470 480 490 500 510 520
>--
initn: 239 init1: 119 opt: 323 Z-score: 317.7 bits: 67.6 E(85289): 5.9e-11
Smith-Waterman score: 323; 28.8% identity (58.4% similar) in 233 aa overlap (18-241:12-236)
10 20 30 40 50
pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--
. .:: . : ..: . : .. .: :. : :.:
XP_016 MLRRRGSPGMGVHVGAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSP
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK
:: ..:... . : . ::: : ::.: : . .:::.: : . :::::::.
XP_016 EPGFSLAQLNLIWQLTDTKQLVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 NVQLTDAGTYKCYIITSKGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPR
:...: :.. :.. . . :.: . ...: .: : .... : ... :. : . .
XP_016 RVRVADEGSFTCFV-SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYQ
120 130 140 150 160
180 190 200 210 220 230
pF1KE2 WFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDI
.:. : : : ::. .. .:: .. .:. . : :.: : :.::::...: .
XP_016 GYPEAEVFW--QDGQGVPLTGNVTTS-QMANEQGLFDVHSILRVVLGANGTYSCLVRNPV
170 180 190 200 210 220
240 250 260 270 280
pF1KE2 AKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
. . .::
XP_016 LQQDAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQ
230 240 250 260 270 280
282 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:57:54 2016 done: Sun Nov 6 18:57:55 2016
Total Scan time: 6.760 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]