Result of FASTA (ccds) for
pFN21AE2183
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2183, 597 aa
1>>>pF1KE2183 597 - 597 aa - 597 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3561+/-0.00139; mu= -4.6526+/- 0.082
mean_var=256.8299+/-54.355, 0's: 0 Z-trim(106.7): 68 B-trim: 122 in 1/52
Lambda= 0.080030
statistics sampled from 9089 (9123) to 9089 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.28), width: 16
Scan time: 3.500
The best scores are: opt bits E(32554)
CCDS3102.1 CEP70 gene_id:80321|Hs108|chr3 ( 597) 3853 458.9 8.5e-129
CCDS75022.1 CEP70 gene_id:80321|Hs108|chr3 ( 579) 3725 444.1 2.3e-124
CCDS75023.1 CEP70 gene_id:80321|Hs108|chr3 ( 554) 3563 425.4 9.6e-119
CCDS75024.1 CEP70 gene_id:80321|Hs108|chr3 ( 445) 2862 344.4 1.9e-94
CCDS82842.1 CEP70 gene_id:80321|Hs108|chr3 ( 212) 1372 172.2 6.2e-43
>>CCDS3102.1 CEP70 gene_id:80321|Hs108|chr3 (597 aa)
initn: 3853 init1: 3853 opt: 3853 Z-score: 2425.7 bits: 458.9 E(32554): 8.5e-129
Smith-Waterman score: 3853; 100.0% identity (100.0% similar) in 597 aa overlap (1-597:1-597)
10 20 30 40 50 60
pF1KE2 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV
490 500 510 520 530 540
550 560 570 580 590
pF1KE2 MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY
550 560 570 580 590
>>CCDS75022.1 CEP70 gene_id:80321|Hs108|chr3 (579 aa)
initn: 3725 init1: 3725 opt: 3725 Z-score: 2346.1 bits: 444.1 E(32554): 2.3e-124
Smith-Waterman score: 3725; 100.0% identity (100.0% similar) in 579 aa overlap (19-597:1-579)
10 20 30 40 50 60
pF1KE2 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK
::::::::::::::::::::::::::::::::::::::::::
CCDS75 MTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK
10 20 30 40
70 80 90 100 110 120
pF1KE2 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE2 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE2 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE2 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE2 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE2 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP
410 420 430 440 450 460
490 500 510 520 530 540
pF1KE2 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV
470 480 490 500 510 520
550 560 570 580 590
pF1KE2 MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY
530 540 550 560 570
>>CCDS75023.1 CEP70 gene_id:80321|Hs108|chr3 (554 aa)
initn: 3563 init1: 3563 opt: 3563 Z-score: 2245.3 bits: 425.4 E(32554): 9.6e-119
Smith-Waterman score: 3563; 99.3% identity (99.6% similar) in 554 aa overlap (1-554:1-554)
10 20 30 40 50 60
pF1KE2 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 QQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 NPRAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAEL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VPWLNLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 SLNGVYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQV
490 500 510 520 530 540
550 560 570 580 590
pF1KE2 MQVLGPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY
:::::::::: ..
CCDS75 MQVLGPEDLQRYLF
550
>>CCDS75024.1 CEP70 gene_id:80321|Hs108|chr3 (445 aa)
initn: 2862 init1: 2862 opt: 2862 Z-score: 1809.3 bits: 344.4 E(32554): 1.9e-94
Smith-Waterman score: 2862; 99.8% identity (100.0% similar) in 443 aa overlap (155-597:3-445)
130 140 150 160 170 180
pF1KE2 KIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVCRLKK
.:::::::::::::::::::::::::::::
CCDS75 MTEVKCQHYKKKRTEQEETIASLQMEVCRLKK
10 20 30
190 200 210 220 230 240
pF1KE2 EEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQSEEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQSEEEN
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE2 DYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYKQQVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYKQQVK
100 110 120 130 140 150
310 320 330 340 350 360
pF1KE2 KLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIHNPRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 KLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIHNPRA
160 170 180 190 200 210
370 380 390 400 410 420
pF1KE2 PVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVPWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 PVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVPWL
220 230 240 250 260 270
430 440 450 460 470 480
pF1KE2 NLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVPSLNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 NLKKQDENEGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVPSLNG
280 290 300 310 320 330
490 500 510 520 530 540
pF1KE2 VYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQVMQVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VYPRMNEVYTRLGEMNNAVRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQVMQVL
340 350 360 370 380 390
550 560 570 580 590
pF1KE2 GPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 GPEDLQSIIYKLEEHEEFFPAFQAFTNDLLEILEIDDLDAIVPAVKKLKVLSY
400 410 420 430 440
>>CCDS82842.1 CEP70 gene_id:80321|Hs108|chr3 (212 aa)
initn: 1372 init1: 1372 opt: 1372 Z-score: 884.3 bits: 172.2 E(32554): 6.2e-43
Smith-Waterman score: 1372; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE2 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MFPVAPKPQDSSQPSDRLMTEKQQEEAEWESINVLLMMHGLKPLSLVKRTDLKDLIIFDK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 QSSQRMRQNLKLLVEETSCQQNMIQELIETNQQLRNELQLEQSRAANQEQRANDLEQIME
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 SVKSKIGELEDESLSRACHQQNKIKDLQKEQKTLQVKCQHYKKKRTEQEETIASLQMEVC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYESKIRKIHTQRQYKEDESQS
::::::::::::::::::::::::::::::::
CCDS82 RLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQ
190 200 210
250 260 270 280 290 300
pF1KE2 EEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPTQHELRLYK
597 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 15:39:42 2016 done: Mon Nov 7 15:39:42 2016
Total Scan time: 3.500 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]