Result of FASTA (omim) for
pFN21AE2089
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2089, 764 aa
1>>>pF1KE2089 764 - 764 aa - 764 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3919+/-0.000435; mu= 15.0383+/- 0.027
mean_var=102.2442+/-20.793, 0's: 0 Z-trim(111.7): 90 B-trim: 421 in 1/57
Lambda= 0.126840
statistics sampled from 20277 (20372) to 20277 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.239), width: 16
Scan time: 10.520
The best scores are: opt bits E(85289)
NP_002635 (OMIM: 173880) polymeric immunoglobulin ( 764) 5079 940.9 0
XP_011507931 (OMIM: 173880) PREDICTED: polymeric i ( 764) 5079 940.9 0
XP_011508354 (OMIM: 605484) PREDICTED: high affini ( 565) 344 74.4 1.5e-12
XP_016857931 (OMIM: 605484) PREDICTED: high affini ( 577) 344 74.4 1.5e-12
NP_001164102 (OMIM: 605484) high affinity immunogl ( 577) 344 74.4 1.5e-12
XP_011508353 (OMIM: 605484) PREDICTED: high affini ( 577) 344 74.4 1.5e-12
NP_114418 (OMIM: 605484) high affinity immunoglobu ( 265) 327 71.1 6.9e-12
NP_001116451 (OMIM: 605484) high affinity immunogl ( 265) 327 71.1 6.9e-12
XP_016879523 (OMIM: 606786) PREDICTED: CMRF35-like ( 234) 250 57.0 1.1e-07
NP_006669 (OMIM: 606786) CMRF35-like molecule 6 pr ( 224) 249 56.8 1.2e-07
NP_001180267 (OMIM: 606015) fas apoptotic inhibito ( 306) 249 56.9 1.5e-07
XP_005273408 (OMIM: 606015) PREDICTED: fas apoptot ( 330) 249 56.9 1.6e-07
NP_005440 (OMIM: 606015) fas apoptotic inhibitory ( 390) 249 56.9 1.9e-07
XP_016879522 (OMIM: 606786) PREDICTED: CMRF35-like ( 269) 246 56.3 2e-07
XP_005257048 (OMIM: 606790) PREDICTED: CMRF35-like ( 223) 238 54.8 4.8e-07
XP_005257047 (OMIM: 606790) PREDICTED: CMRF35-like ( 263) 238 54.8 5.5e-07
NP_009192 (OMIM: 606790) CMRF35-like molecule 8 is ( 299) 238 54.8 6.1e-07
NP_001161794 (OMIM: 610520) CMRF35-like molecule 9 ( 307) 213 50.3 1.5e-05
XP_011522686 (OMIM: 610520) PREDICTED: CMRF35-like ( 318) 213 50.3 1.5e-05
XP_005257132 (OMIM: 610520) PREDICTED: CMRF35-like ( 321) 213 50.3 1.5e-05
NP_660316 (OMIM: 610520) CMRF35-like molecule 9 is ( 332) 213 50.3 1.6e-05
XP_006721784 (OMIM: 610520) PREDICTED: CMRF35-like ( 372) 213 50.3 1.7e-05
NP_001186439 (OMIM: 604531) natural cytotoxicity t ( 258) 207 49.1 2.7e-05
NP_001186438 (OMIM: 604531) natural cytotoxicity t ( 270) 207 49.1 2.9e-05
XP_016866989 (OMIM: 604531) PREDICTED: natural cyt ( 274) 207 49.1 2.9e-05
NP_004819 (OMIM: 604531) natural cytotoxicity trig ( 276) 207 49.1 2.9e-05
NP_852114 (OMIM: 609801) CMRF35-like molecule 2 pr ( 205) 196 47.0 9.2e-05
XP_016880064 (OMIM: 609801) PREDICTED: CMRF35-like ( 235) 196 47.1 0.0001
NP_001258750 (OMIM: 221770,605086) triggering rece ( 219) 194 46.7 0.00013
NP_061838 (OMIM: 221770,605086) triggering recepto ( 230) 194 46.7 0.00013
NP_937796 (OMIM: 614664) trem-like transcript 4 pr ( 200) 187 45.4 0.00028
XP_005257084 (OMIM: 610705) PREDICTED: CMRF35-like ( 209) 182 44.5 0.00055
NP_777552 (OMIM: 610705) CMRF35-like molecule 7 pr ( 201) 180 44.1 0.00069
NP_001311005 (OMIM: 616560) CD300c molecule-like i ( 153) 176 43.3 0.00092
XP_011523871 (OMIM: 616560) PREDICTED: CD300c mole ( 169) 176 43.3 0.001
NP_001161795 (OMIM: 610520) CMRF35-like molecule 9 ( 273) 179 44.0 0.001
NP_001311002 (OMIM: 616560) CD300c molecule-like i ( 201) 176 43.4 0.0011
XP_006721785 (OMIM: 610520) PREDICTED: CMRF35-like ( 338) 179 44.1 0.0012
NP_001108624 (OMIM: 616301) CMRF35-like molecule 4 ( 194) 172 42.6 0.0018
NP_001161796 (OMIM: 610520) CMRF35-like molecule 9 ( 233) 168 42.0 0.0036
XP_016879724 (OMIM: 610520) PREDICTED: CMRF35-like ( 247) 168 42.0 0.0037
XP_005257133 (OMIM: 610520) PREDICTED: CMRF35-like ( 287) 168 42.0 0.0042
XP_016879706 (OMIM: 609807) PREDICTED: CMRF35-like ( 236) 164 41.2 0.006
NP_001276015 (OMIM: 609807) CMRF35-like molecule 1 ( 239) 164 41.2 0.006
XP_016879705 (OMIM: 609807) PREDICTED: CMRF35-like ( 240) 164 41.2 0.0061
XP_016879703 (OMIM: 609807) PREDICTED: CMRF35-like ( 263) 164 41.3 0.0065
XP_016879702 (OMIM: 609807) PREDICTED: CMRF35-like ( 266) 164 41.3 0.0066
NP_001276013 (OMIM: 609807) CMRF35-like molecule 1 ( 305) 164 41.3 0.0074
XP_016879701 (OMIM: 609807) PREDICTED: CMRF35-like ( 309) 164 41.3 0.0074
XP_016879704 (OMIM: 609807) PREDICTED: CMRF35-like ( 247) 162 40.9 0.008
>>NP_002635 (OMIM: 173880) polymeric immunoglobulin rece (764 aa)
initn: 5079 init1: 5079 opt: 5079 Z-score: 5027.3 bits: 940.9 E(85289): 0
Smith-Waterman score: 5079; 100.0% identity (100.0% similar) in 764 aa overlap (1-764:1-764)
10 20 30 40 50 60
pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 GVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 NGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 NGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 WYWCGVKQGHFYGETAAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 WYWCGVKQGHFYGETAAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 DPRLFAEEKAVADTRDQADGSRASVDSGSSEEQGGSSRALVSTLVPLGLVLAVGAVAVGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DPRLFAEEKAVADTRDQADGSRASVDSGSSEEQGGSSRALVSTLVPLGLVLAVGAVAVGV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 ARARHRKNVDRVSIRSYRTDISMSDFENSREFGANDNMGASSITQETSLGGKEEFVATTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ARARHRKNVDRVSIRSYRTDISMSDFENSREFGANDNMGASSITQETSLGGKEEFVATTE
670 680 690 700 710 720
730 740 750 760
pF1KE2 STTETKEPKKAKRSSKEEAEMAYKDFLLQSSTVAAEAQDGPQEA
::::::::::::::::::::::::::::::::::::::::::::
NP_002 STTETKEPKKAKRSSKEEAEMAYKDFLLQSSTVAAEAQDGPQEA
730 740 750 760
>>XP_011507931 (OMIM: 173880) PREDICTED: polymeric immun (764 aa)
initn: 5079 init1: 5079 opt: 5079 Z-score: 5027.3 bits: 940.9 E(85289): 0
Smith-Waterman score: 5079; 100.0% identity (100.0% similar) in 764 aa overlap (1-764:1-764)
10 20 30 40 50 60
pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 GVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 NGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 WYWCGVKQGHFYGETAAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WYWCGVKQGHFYGETAAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 DPRLFAEEKAVADTRDQADGSRASVDSGSSEEQGGSSRALVSTLVPLGLVLAVGAVAVGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPRLFAEEKAVADTRDQADGSRASVDSGSSEEQGGSSRALVSTLVPLGLVLAVGAVAVGV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 ARARHRKNVDRVSIRSYRTDISMSDFENSREFGANDNMGASSITQETSLGGKEEFVATTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARARHRKNVDRVSIRSYRTDISMSDFENSREFGANDNMGASSITQETSLGGKEEFVATTE
670 680 690 700 710 720
730 740 750 760
pF1KE2 STTETKEPKKAKRSSKEEAEMAYKDFLLQSSTVAAEAQDGPQEA
::::::::::::::::::::::::::::::::::::::::::::
XP_011 STTETKEPKKAKRSSKEEAEMAYKDFLLQSSTVAAEAQDGPQEA
730 740 750 760
>>XP_011508354 (OMIM: 605484) PREDICTED: high affinity i (565 aa)
initn: 283 init1: 202 opt: 344 Z-score: 346.4 bits: 74.4 E(85289): 1.5e-12
Smith-Waterman score: 344; 45.9% identity (70.6% similar) in 109 aa overlap (24-131:99-207)
10 20 30 40 50
pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRK
: . :.. :..:.: :.: :.::::: ::
XP_011 THLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK
70 80 90 100 110 120
60 70 80 90 100 110
pF1KE2 YWCRQGA-RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGL
:::: : : : :..:.. :. .: :. ::.::. : ::: ..::: :: : : ::.
XP_011 YWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI
130 140 150 160 170 180
120 130 140 150 160 170
pF1KE2 GINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLY
: .. : ....: .: ::
XP_011 GSENNMLFLSMNLTISAGPASTLPTATPAAGELTMRSYGTASPVANRWTPGTTQTLGQGT
190 200 210 220 230 240
>>XP_016857931 (OMIM: 605484) PREDICTED: high affinity i (577 aa)
initn: 283 init1: 202 opt: 344 Z-score: 346.3 bits: 74.4 E(85289): 1.5e-12
Smith-Waterman score: 344; 45.9% identity (70.6% similar) in 109 aa overlap (24-131:111-219)
10 20 30 40 50
pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRK
: . :.. :..:.: :.: :.::::: ::
XP_016 THLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK
90 100 110 120 130 140
60 70 80 90 100 110
pF1KE2 YWCRQGA-RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGL
:::: : : : :..:.. :. .: :. ::.::. : ::: ..::: :: : : ::.
XP_016 YWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI
150 160 170 180 190 200
120 130 140 150 160 170
pF1KE2 GINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLY
: .. : ....: .: ::
XP_016 GSENNMLFLSMNLTISAGPASTLPTATPAAGELTMRSYGTASPVANRWTPGTTQTLGQGT
210 220 230 240 250 260
>>NP_001164102 (OMIM: 605484) high affinity immunoglobul (577 aa)
initn: 283 init1: 202 opt: 344 Z-score: 346.3 bits: 74.4 E(85289): 1.5e-12
Smith-Waterman score: 344; 45.9% identity (70.6% similar) in 109 aa overlap (24-131:111-219)
10 20 30 40 50
pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRK
: . :.. :..:.: :.: :.::::: ::
NP_001 THLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK
90 100 110 120 130 140
60 70 80 90 100 110
pF1KE2 YWCRQGA-RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGL
:::: : : : :..:.. :. .: :. ::.::. : ::: ..::: :: : : ::.
NP_001 YWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI
150 160 170 180 190 200
120 130 140 150 160 170
pF1KE2 GINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLY
: .. : ....: .: ::
NP_001 GSENNMLFLSMNLTISAGPASTLPTATPAAGELTMRSYGTASPVANRWTPGTTQTLGQGT
210 220 230 240 250 260
>>XP_011508353 (OMIM: 605484) PREDICTED: high affinity i (577 aa)
initn: 283 init1: 202 opt: 344 Z-score: 346.3 bits: 74.4 E(85289): 1.5e-12
Smith-Waterman score: 344; 45.9% identity (70.6% similar) in 109 aa overlap (24-131:111-219)
10 20 30 40 50
pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRK
: . :.. :..:.: :.: :.::::: ::
XP_011 THLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK
90 100 110 120 130 140
60 70 80 90 100 110
pF1KE2 YWCRQGA-RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGL
:::: : : : :..:.. :. .: :. ::.::. : ::: ..::: :: : : ::.
XP_011 YWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI
150 160 170 180 190 200
120 130 140 150 160 170
pF1KE2 GINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLY
: .. : ....: .: ::
XP_011 GSENNMLFLSMNLTISAGPASTLPTATPAAGELTMRSYGTASPVANRWTPGTTQTLGQGT
210 220 230 240 250 260
>>NP_114418 (OMIM: 605484) high affinity immunoglobulin (265 aa)
initn: 324 init1: 127 opt: 327 Z-score: 334.4 bits: 71.1 E(85289): 6.9e-12
Smith-Waterman score: 327; 45.3% identity (70.8% similar) in 106 aa overlap (24-128:111-216)
10 20 30 40 50
pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRK
: . :.. :..:.: :.: :.::::: ::
NP_114 THLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK
90 100 110 120 130 140
60 70 80 90 100 110
pF1KE2 YWCRQGA-RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGL
:::: : : : :..:.. :. .: :. ::.::. : ::: ..::: :: : : ::.
NP_114 YWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI
150 160 170 180 190 200
120 130 140 150 160 170
pF1KE2 GINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLY
: .. : ....: .:
NP_114 GSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCLCLWLWFYCKGSSGEGGPLRR
210 220 230 240 250 260
>>NP_001116451 (OMIM: 605484) high affinity immunoglobul (265 aa)
initn: 324 init1: 127 opt: 327 Z-score: 334.4 bits: 71.1 E(85289): 6.9e-12
Smith-Waterman score: 327; 45.3% identity (70.8% similar) in 106 aa overlap (24-128:111-216)
10 20 30 40 50
pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRK
: . :.. :..:.: :.: :.::::: ::
NP_001 THLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK
90 100 110 120 130 140
60 70 80 90 100 110
pF1KE2 YWCRQGA-RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGL
:::: : : : :..:.. :. .: :. ::.::. : ::: ..::: :: : : ::.
NP_001 YWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI
150 160 170 180 190 200
120 130 140 150 160 170
pF1KE2 GINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLY
: .. : ....: .:
NP_001 GSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCLCLWLWFYCKGSSGEGGPLRR
210 220 230 240 250 260
>>XP_016879523 (OMIM: 606786) PREDICTED: CMRF35-like mol (234 aa)
initn: 205 init1: 123 opt: 250 Z-score: 259.0 bits: 57.0 E(85289): 1.1e-07
Smith-Waterman score: 250; 37.2% identity (64.5% similar) in 121 aa overlap (356-468:28-143)
330 340 350 360 370 380
pF1KE2 GAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWC
: .: : .:::..: : :.... :.::
XP_016 MTARAWASWRSSALLLLLVPGYFPLSHPMTVAGPVGGSLSVQCRYEKEHRTLNKFWC
10 20 30 40 50
390 400 410 420 430 440
pF1KE2 LWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNG
. : :: .:...: .. .::.:. . :.: .::: :..:: .::: ::: .
XP_016 --RPPQILRCDKIVETKG-SAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGV--
60 70 80 90 100 110
450 460 470 480 490
pF1KE2 DTLWR-------TTVEIKIIEGEPNL-KVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCK
:: : . ::.... ::: : ..::
XP_016 DTPWLRDFHDPIVEVEVSVFPGEPLLFSAPGLPEPRAGHSVPEERSGTGGCEPGGCLSPA
120 130 140 150 160 170
500 510 520 530 540 550
pF1KE2 WNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAA
XP_016 TAVPRALASQSLWVTLRRVNITPFPQVTLSLPGWGETWRPVPLPQVSRAALTSEMVSWLC
180 190 200 210 220 230
>>NP_006669 (OMIM: 606786) CMRF35-like molecule 6 precur (224 aa)
initn: 205 init1: 123 opt: 249 Z-score: 258.3 bits: 56.8 E(85289): 1.2e-07
Smith-Waterman score: 249; 30.5% identity (56.1% similar) in 164 aa overlap (356-519:28-181)
330 340 350 360 370 380
pF1KE2 GAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGGSVAVLCPYNRKESKSIKYWC
: .: : .:::..: : :.... :.::
NP_006 MTARAWASWRSSALLLLLVPGYFPLSHPMTVAGPVGGSLSVQCRYEKEHRTLNKFWC
10 20 30 40 50
390 400 410 420 430 440
pF1KE2 LWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNG
. : :: .:...: .. .::.:. . :.: .::: :..:: .::: ::: .
NP_006 --RPPQILRCDKIVETKG-SAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGV--
60 70 80 90 100 110
450 460 470 480 490 500
pF1KE2 DTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQA
:: : . :.: : .. :..:: .. : :. . : .. .
NP_006 DTPWLRDFHDPIVEVEVSVFPAGTTTASSPQSSMGTSGPPTKLPVHT-----WPSVTRKD
120 130 140 150 160
510 520 530 540 550 560
pF1KE2 LPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEER
: . :.. : :
NP_006 SPEPSPHPGSLFSNVRFLLLVLLELPLLLSMLGAVLWVNRPQRSSRSRQNWPKGENQ
170 180 190 200 210 220
764 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:40:58 2016 done: Sun Nov 6 18:40:59 2016
Total Scan time: 10.520 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]