Result of FASTA (ccds) for
pFN21AE2083
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2083, 757 aa
1>>>pF1KE2083 757 - 757 aa - 757 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0747+/-0.000973; mu= 12.4348+/- 0.058
mean_var=114.2961+/-23.307, 0's: 0 Z-trim(108.2): 9 B-trim: 424 in 1/50
Lambda= 0.119966
statistics sampled from 10031 (10036) to 10031 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.308), width: 16
Scan time: 4.000
The best scores are: opt bits E(32554)
CCDS13869.1 ASCC2 gene_id:84164|Hs108|chr22 ( 757) 5065 888.0 0
CCDS56226.1 ASCC2 gene_id:84164|Hs108|chr22 ( 681) 3972 698.8 7.2e-201
>>CCDS13869.1 ASCC2 gene_id:84164|Hs108|chr22 (757 aa)
initn: 5065 init1: 5065 opt: 5065 Z-score: 4741.3 bits: 888.0 E(32554): 0
Smith-Waterman score: 5065; 100.0% identity (100.0% similar) in 757 aa overlap (1-757:1-757)
10 20 30 40 50 60
pF1KE2 MPALPLDQLQITHKDPKTGKLRTSPALHPEQKADRYFVLYKPPPKDNIPALVEEYLERAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MPALPLDQLQITHKDPKTGKLRTSPALHPEQKADRYFVLYKPPPKDNIPALVEEYLERAT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 FVANDLDWLLALPHDKFWCQVIFDETLQKCLDSYLRYVPRKFDEGVASAPEVVDMQKRLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FVANDLDWLLALPHDKFWCQVIFDETLQKCLDSYLRYVPRKFDEGVASAPEVVDMQKRLH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 RSVFLTFLRMSTHKESKDHFISPSAFGEILYNNFLFDIPKILDLCVLFGKGNSPLLQKMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RSVFLTFLRMSTHKESKDHFISPSAFGEILYNNFLFDIPKILDLCVLFGKGNSPLLQKMI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GNIFTQQPSYYSDLDETLPTILQVFSNILQHCGLQGDGANTTPQKLEERGRLTPSDMPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GNIFTQQPSYYSDLDETLPTILQVFSNILQHCGLQGDGANTTPQKLEERGRLTPSDMPLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 ELKDIVLYLCDTCTTLWAFLDIFPLACQTFQKHDFCYRLASFYEAAIPEMESAIKKRRLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ELKDIVLYLCDTCTTLWAFLDIFPLACQTFQKHDFCYRLASFYEAAIPEMESAIKKRRLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 DSKLLGDLWQRLSHSRKKLMEIFHIILNQICLLPILESSCDNIQGFIEEFLQIFSSLLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DSKLLGDLWQRLSHSRKKLMEIFHIILNQICLLPILESSCDNIQGFIEEFLQIFSSLLQE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 KRFLRDYDALFPVAEDISLLQQASSVLDETRTAYILQAVESAWEGVDRRKATDAKDPSVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 KRFLRDYDALFPVAEDISLLQQASSVLDETRTAYILQAVESAWEGVDRRKATDAKDPSVI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 EEPNGEPNGVTVTAEAVSQASSHPENSEEEECMGAAAAVGPAMCGVELDSLISQVKDLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EEPNGEPNGVTVTAEAVSQASSHPENSEEEECMGAAAAVGPAMCGVELDSLISQVKDLLP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 DLGEGFILACLEYYHYDPEQVINNILEERLAPTLSQLDRNLDREMKPDPTPLLTSRHNVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DLGEGFILACLEYYHYDPEQVINNILEERLAPTLSQLDRNLDREMKPDPTPLLTSRHNVF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 QNDEFDVFSRDSVDLSRVHKGKSTRKEENTRSLLNDKRAVAAQRQRYEQYSVVVEEVPLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QNDEFDVFSRDSVDLSRVHKGKSTRKEENTRSLLNDKRAVAAQRQRYEQYSVVVEEVPLQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 PGESLPYHSVYYEDEYDDTYDGNQVGANDADSDDELISRRPFTIPQVLRTKVPREGQEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PGESLPYHSVYYEDEYDDTYDGNQVGANDADSDDELISRRPFTIPQVLRTKVPREGQEED
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 DDDEEDDADEEAPKPDHFVQDPAVLREKAEARRMAFLAKKGYRHDSSTAVAGSPRGHGQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 DDDEEDDADEEAPKPDHFVQDPAVLREKAEARRMAFLAKKGYRHDSSTAVAGSPRGHGQS
670 680 690 700 710 720
730 740 750
pF1KE2 RETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS
:::::::::::::::::::::::::::::::::::::
CCDS13 RETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS
730 740 750
>>CCDS56226.1 ASCC2 gene_id:84164|Hs108|chr22 (681 aa)
initn: 4138 init1: 3972 opt: 3972 Z-score: 3719.7 bits: 698.8 E(32554): 7.2e-201
Smith-Waterman score: 4347; 90.0% identity (90.0% similar) in 757 aa overlap (1-757:1-681)
10 20 30 40 50 60
pF1KE2 MPALPLDQLQITHKDPKTGKLRTSPALHPEQKADRYFVLYKPPPKDNIPALVEEYLERAT
:::::::::::::::::::::::::::
CCDS56 MPALPLDQLQITHKDPKTGKLRTSPAL---------------------------------
10 20
70 80 90 100 110 120
pF1KE2 FVANDLDWLLALPHDKFWCQVIFDETLQKCLDSYLRYVPRKFDEGVASAPEVVDMQKRLH
::::::::::::::::::::::::::::::::::::::::
CCDS56 --------------------VIFDETLQKCLDSYLRYVPRKFDEGVASAPEVVDMQKRLH
30 40 50 60
130 140 150 160 170 180
pF1KE2 RSVFLTFLRMSTHKESKDHFISPSAFGEILYNNFLFDIPKILDLCVLFGKGNSPLLQKMI
::::::::::::::::: ::::::::::::::::::::
CCDS56 RSVFLTFLRMSTHKESK-----------------------ILDLCVLFGKGNSPLLQKMI
70 80 90 100
190 200 210 220 230 240
pF1KE2 GNIFTQQPSYYSDLDETLPTILQVFSNILQHCGLQGDGANTTPQKLEERGRLTPSDMPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GNIFTQQPSYYSDLDETLPTILQVFSNILQHCGLQGDGANTTPQKLEERGRLTPSDMPLL
110 120 130 140 150 160
250 260 270 280 290 300
pF1KE2 ELKDIVLYLCDTCTTLWAFLDIFPLACQTFQKHDFCYRLASFYEAAIPEMESAIKKRRLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ELKDIVLYLCDTCTTLWAFLDIFPLACQTFQKHDFCYRLASFYEAAIPEMESAIKKRRLE
170 180 190 200 210 220
310 320 330 340 350 360
pF1KE2 DSKLLGDLWQRLSHSRKKLMEIFHIILNQICLLPILESSCDNIQGFIEEFLQIFSSLLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DSKLLGDLWQRLSHSRKKLMEIFHIILNQICLLPILESSCDNIQGFIEEFLQIFSSLLQE
230 240 250 260 270 280
370 380 390 400 410 420
pF1KE2 KRFLRDYDALFPVAEDISLLQQASSVLDETRTAYILQAVESAWEGVDRRKATDAKDPSVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KRFLRDYDALFPVAEDISLLQQASSVLDETRTAYILQAVESAWEGVDRRKATDAKDPSVI
290 300 310 320 330 340
430 440 450 460 470 480
pF1KE2 EEPNGEPNGVTVTAEAVSQASSHPENSEEEECMGAAAAVGPAMCGVELDSLISQVKDLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 EEPNGEPNGVTVTAEAVSQASSHPENSEEEECMGAAAAVGPAMCGVELDSLISQVKDLLP
350 360 370 380 390 400
490 500 510 520 530 540
pF1KE2 DLGEGFILACLEYYHYDPEQVINNILEERLAPTLSQLDRNLDREMKPDPTPLLTSRHNVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DLGEGFILACLEYYHYDPEQVINNILEERLAPTLSQLDRNLDREMKPDPTPLLTSRHNVF
410 420 430 440 450 460
550 560 570 580 590 600
pF1KE2 QNDEFDVFSRDSVDLSRVHKGKSTRKEENTRSLLNDKRAVAAQRQRYEQYSVVVEEVPLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QNDEFDVFSRDSVDLSRVHKGKSTRKEENTRSLLNDKRAVAAQRQRYEQYSVVVEEVPLQ
470 480 490 500 510 520
610 620 630 640 650 660
pF1KE2 PGESLPYHSVYYEDEYDDTYDGNQVGANDADSDDELISRRPFTIPQVLRTKVPREGQEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PGESLPYHSVYYEDEYDDTYDGNQVGANDADSDDELISRRPFTIPQVLRTKVPREGQEED
530 540 550 560 570 580
670 680 690 700 710 720
pF1KE2 DDDEEDDADEEAPKPDHFVQDPAVLREKAEARRMAFLAKKGYRHDSSTAVAGSPRGHGQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DDDEEDDADEEAPKPDHFVQDPAVLREKAEARRMAFLAKKGYRHDSSTAVAGSPRGHGQS
590 600 610 620 630 640
730 740 750
pF1KE2 RETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS
:::::::::::::::::::::::::::::::::::::
CCDS56 RETTQERRKKEANKATRANHNRRTMADRKRSKGMIPS
650 660 670 680
757 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 12:55:42 2016 done: Sun Nov 6 12:55:42 2016
Total Scan time: 4.000 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]