Result of FASTA (ccds) for
pFN21AE2071
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2071, 730 aa
1>>>pF1KE2071 730 - 730 aa - 730 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.1651+/-0.00102; mu= -2.2320+/- 0.061
mean_var=255.8290+/-52.890, 0's: 0 Z-trim(112.5): 38 B-trim: 0 in 0/50
Lambda= 0.080186
statistics sampled from 13221 (13251) to 13221 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.407), width: 16
Scan time: 4.600
The best scores are: opt bits E(32554)
CCDS1502.1 DTL gene_id:51514|Hs108|chr1 ( 730) 4960 587.5 2.5e-167
CCDS65778.1 DTL gene_id:51514|Hs108|chr1 ( 688) 4550 540.0 4.5e-153
>>CCDS1502.1 DTL gene_id:51514|Hs108|chr1 (730 aa)
initn: 4960 init1: 4960 opt: 4960 Z-score: 3117.5 bits: 587.5 E(32554): 2.5e-167
Smith-Waterman score: 4960; 99.7% identity (99.9% similar) in 730 aa overlap (1-730:1-730)
10 20 30 40 50 60
pF1KE2 MLFNSVLRQPQLGVLRNGWSSQYPLQSLLTGYQCSGNDEHTSYGETGVPVPPFGCTFSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 MLFNSVLRQPQLGVLRNGWSSQYPLQSLLTGYQCSGNDEHTSYGETGVPVPPFGCTFSSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 VTVTSSQSTPAKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
CCDS15 VTVTSSQSTPAKAPRAKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKTLPSPVTITPSSMRKICTYFHRKSQED
::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::
CCDS15 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKKLPSPVTITPSSMRKICTYFHRKSQED
670 680 690 700 710 720
730
pF1KE2 FCGPEHSTEL
::::::::::
CCDS15 FCGPEHSTEL
730
>>CCDS65778.1 DTL gene_id:51514|Hs108|chr1 (688 aa)
initn: 4544 init1: 4544 opt: 4550 Z-score: 2861.6 bits: 540.0 E(32554): 4.5e-153
Smith-Waterman score: 4559; 94.0% identity (94.1% similar) in 730 aa overlap (1-730:1-688)
10 20 30 40 50 60
pF1KE2 MLFNSVLRQPQLGVLRNGWSSQYPLQSLLTGYQCSGNDEHTSYGETGVPVPPFGCTFSSA
::::::::::::::::: :
CCDS65 MLFNSVLRQPQLGVLRN------------------------------------------A
10
70 80 90 100 110 120
pF1KE2 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ
20 30 40 50 60 70
130 140 150 160 170 180
pF1KE2 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR
80 90 100 110 120 130
190 200 210 220 230 240
pF1KE2 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII
140 150 160 170 180 190
250 260 270 280 290 300
pF1KE2 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM
200 210 220 230 240 250
310 320 330 340 350 360
pF1KE2 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS
260 270 280 290 300 310
370 380 390 400 410 420
pF1KE2 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL
320 330 340 350 360 370
430 440 450 460 470 480
pF1KE2 VTVTSSQSTPAKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
CCDS65 VTVTSSQSTPAKAPRAKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI
380 390 400 410 420 430
490 500 510 520 530 540
pF1KE2 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ
440 450 460 470 480 490
550 560 570 580 590 600
pF1KE2 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK
500 510 520 530 540 550
610 620 630 640 650 660
pF1KE2 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK
560 570 580 590 600 610
670 680 690 700 710 720
pF1KE2 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKTLPSPVTITPSSMRKICTYFHRKSQED
::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::
CCDS65 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKKLPSPVTITPSSMRKICTYFHRKSQED
620 630 640 650 660 670
730
pF1KE2 FCGPEHSTEL
::::::::::
CCDS65 FCGPEHSTEL
680
730 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 20:31:35 2016 done: Sun Nov 6 20:31:35 2016
Total Scan time: 4.600 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]