Result of FASTA (ccds) for
pFN21AE2066
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2066, 725 aa
1>>>pF1KE2066 725 - 725 aa - 725 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.4470+/-0.00151; mu= -4.2246+/- 0.089
mean_var=534.0994+/-118.151, 0's: 0 Z-trim(108.5): 206 B-trim: 162 in 1/54
Lambda= 0.055496
statistics sampled from 10104 (10268) to 10104 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.621), E-opt: 0.2 (0.315), width: 16
Scan time: 3.470
The best scores are: opt bits E(32554)
CCDS47334.1 HMMR gene_id:3161|Hs108|chr5 ( 725) 4510 376.9 6e-104
CCDS4362.1 HMMR gene_id:3161|Hs108|chr5 ( 724) 4492 375.5 1.6e-103
CCDS4363.1 HMMR gene_id:3161|Hs108|chr5 ( 709) 3929 330.4 5.9e-90
CCDS47335.1 HMMR gene_id:3161|Hs108|chr5 ( 638) 3919 329.5 9.7e-90
>>CCDS47334.1 HMMR gene_id:3161|Hs108|chr5 (725 aa)
initn: 4510 init1: 4510 opt: 4510 Z-score: 1979.7 bits: 376.9 E(32554): 6e-104
Smith-Waterman score: 4510; 99.9% identity (100.0% similar) in 725 aa overlap (1-725:1-725)
10 20 30 40 50 60
pF1KE2 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 TLPASARKVKSSESKKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TLPASARKVKSSESKKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEHEKLQQKELQIDSLLQQEKELSSSLHQK
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
CCDS47 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC
670 680 690 700 710 720
pF1KE2 QESWK
:::::
CCDS47 QESWK
>>CCDS4362.1 HMMR gene_id:3161|Hs108|chr5 (724 aa)
initn: 4020 init1: 4020 opt: 4492 Z-score: 1971.9 bits: 375.5 E(32554): 1.6e-103
Smith-Waterman score: 4492; 99.7% identity (99.9% similar) in 725 aa overlap (1-725:1-724)
10 20 30 40 50 60
pF1KE2 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 TLPASARKVKSSESKKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARL
::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TLPASARKVKSSESK-ESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARL
70 80 90 100 110
130 140 150 160 170 180
pF1KE2 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE2 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE2 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEHEKLQQKELQIDSLLQQEKELSSSLHQK
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
CCDS43 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQK
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE2 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE2 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE2 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE2 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA
540 550 560 570 580 590
610 620 630 640 650 660
pF1KE2 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR
600 610 620 630 640 650
670 680 690 700 710 720
pF1KE2 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC
660 670 680 690 700 710
pF1KE2 QESWK
:::::
CCDS43 QESWK
720
>>CCDS4363.1 HMMR gene_id:3161|Hs108|chr5 (709 aa)
initn: 3926 init1: 3926 opt: 3929 Z-score: 1728.4 bits: 330.4 E(32554): 5.9e-90
Smith-Waterman score: 4370; 97.7% identity (97.8% similar) in 725 aa overlap (1-725:1-709)
10 20 30 40 50 60
pF1KE2 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 TLPASARKVKSSESKKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARL
::::::::::::::: :::::::::::::::::::::::::::::
CCDS43 TLPASARKVKSSESK----------------IRVLLQERGAQDRRIQDLETELEKMEARL
70 80 90 100
130 140 150 160 170 180
pF1KE2 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE2 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE2 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE2 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEHEKLQQKELQIDSLLQQEKELSSSLHQK
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
CCDS43 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQK
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE2 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE2 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS
410 420 430 440 450 460
490 500 510 520 530 540
pF1KE2 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD
470 480 490 500 510 520
550 560 570 580 590 600
pF1KE2 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA
530 540 550 560 570 580
610 620 630 640 650 660
pF1KE2 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR
590 600 610 620 630 640
670 680 690 700 710 720
pF1KE2 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC
650 660 670 680 690 700
pF1KE2 QESWK
:::::
CCDS43 QESWK
>>CCDS47335.1 HMMR gene_id:3161|Hs108|chr5 (638 aa)
initn: 3919 init1: 3919 opt: 3919 Z-score: 1724.6 bits: 329.5 E(32554): 9.7e-90
Smith-Waterman score: 3919; 99.8% identity (100.0% similar) in 634 aa overlap (92-725:5-638)
70 80 90 100 110 120
pF1KE2 LPASARKVKSSESKKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARLN
::::::::::::::::::::::::::::::
CCDS47 MTLLIRVLLQERGAQDRRIQDLETELEKMEARLN
10 20 30
130 140 150 160 170 180
pF1KE2 AALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRETK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRETK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE2 MRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEEI
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE2 SCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEK
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE2 EDHVNRNREHNENLNAEMQNLKQKFILEQQEHEKLQQKELQIDSLLQQEKELSSSLHQKL
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS47 EDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKL
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE2 CSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKL
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE2 KGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSSL
340 350 360 370 380 390
490 500 510 520 530 540
pF1KE2 QEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITDL
400 410 420 430 440 450
550 560 570 580 590 600
pF1KE2 QNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDAF
460 470 480 490 500 510
610 620 630 640 650 660
pF1KE2 EVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLRC
520 530 540 550 560 570
670 680 690 700 710 720
pF1KE2 QLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMECQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMECQ
580 590 600 610 620 630
pF1KE2 ESWK
::::
CCDS47 ESWK
725 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 17:02:43 2016 done: Sun Nov 6 17:02:44 2016
Total Scan time: 3.470 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]