Result of FASTA (ccds) for
pFN21AE2030
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2030, 620 aa
1>>>pF1KE2030 620 - 620 aa - 620 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2972+/-0.00114; mu= 13.5962+/- 0.068
mean_var=72.8396+/-15.197, 0's: 0 Z-trim(102.3): 42 B-trim: 27 in 1/47
Lambda= 0.150276
statistics sampled from 6852 (6869) to 6852 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.574), E-opt: 0.2 (0.211), width: 16
Scan time: 2.610
The best scores are: opt bits E(32554)
CCDS9542.2 CDC16 gene_id:8881|Hs108|chr13 ( 620) 4149 909.4 0
CCDS81786.1 CDC16 gene_id:8881|Hs108|chr13 ( 619) 4131 905.5 0
CCDS81787.1 CDC16 gene_id:8881|Hs108|chr13 ( 526) 3511 771.1 0
>>CCDS9542.2 CDC16 gene_id:8881|Hs108|chr13 (620 aa)
initn: 4149 init1: 4149 opt: 4149 Z-score: 4860.1 bits: 909.4 E(32554): 0
Smith-Waterman score: 4149; 100.0% identity (100.0% similar) in 620 aa overlap (1-620:1-620)
10 20 30 40 50 60
pF1KE2 MNLERLRKRVRQYLDQQQYQSALFWADKVASLSREEPQDIYWLAQCLYLTAQYHRAAHAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MNLERLRKRVRQYLDQQQYQSALFWADKVASLSREEPQDIYWLAQCLYLTAQYHRAAHAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 RSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 RSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 WEMSQSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 WEMSQSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 EKELLESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 EKELLESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 HYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 HYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 AQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 AQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 KLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 KLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETF
550 560 570 580 590 600
610 620
pF1KE2 EIEMNESDMMLETSMSDHST
::::::::::::::::::::
CCDS95 EIEMNESDMMLETSMSDHST
610 620
>>CCDS81786.1 CDC16 gene_id:8881|Hs108|chr13 (619 aa)
initn: 3921 init1: 3921 opt: 4131 Z-score: 4839.1 bits: 905.5 E(32554): 0
Smith-Waterman score: 4131; 99.8% identity (99.8% similar) in 620 aa overlap (1-620:1-619)
10 20 30 40 50 60
pF1KE2 MNLERLRKRVRQYLDQQQYQSALFWADKVASLSREEPQDIYWLAQCLYLTAQYHRAAHAL
::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
CCDS81 MNLERLRKRVRQYLDQQQYQSALFWADKVASLSRE-PQDIYWLAQCLYLTAQYHRAAHAL
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 RSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 RSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 WEMSQSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 WEMSQSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQE
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 EKELLESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 EKELLESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAER
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE2 HYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 HYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE2 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTA
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE2 AQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 AQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE2 AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE2 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKD
480 490 500 510 520 530
550 560 570 580 590 600
pF1KE2 KLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 KLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETF
540 550 560 570 580 590
610 620
pF1KE2 EIEMNESDMMLETSMSDHST
::::::::::::::::::::
CCDS81 EIEMNESDMMLETSMSDHST
600 610
>>CCDS81787.1 CDC16 gene_id:8881|Hs108|chr13 (526 aa)
initn: 3511 init1: 3511 opt: 3511 Z-score: 4113.8 bits: 771.1 E(32554): 0
Smith-Waterman score: 3511; 100.0% identity (100.0% similar) in 526 aa overlap (95-620:1-526)
70 80 90 100 110 120
pF1KE2 LDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSDWEMS
::::::::::::::::::::::::::::::
CCDS81 MEEPINKRLFEKYLKDESGFKDPSSDWEMS
10 20 30
130 140 150 160 170 180
pF1KE2 QSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQEEKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQEEKEL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE2 LESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAERHYYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 LESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAERHYYN
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE2 CDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 CDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFA
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE2 VGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 VGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLM
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE2 KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKW
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE2 FLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 FLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSA
340 350 360 370 380 390
490 500 510 520 530 540
pF1KE2 IGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKDKLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 IGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKDKLKC
400 410 420 430 440 450
550 560 570 580 590 600
pF1KE2 YDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETFEIEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 YDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETFEIEM
460 470 480 490 500 510
610 620
pF1KE2 NESDMMLETSMSDHST
::::::::::::::::
CCDS81 NESDMMLETSMSDHST
520
620 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:20:03 2016 done: Sun Nov 6 21:20:03 2016
Total Scan time: 2.610 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]