FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1987, 562 aa
  1>>>pF1KE1987 562 - 562 aa - 562 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.6253+/-0.000828; mu= 13.5608+/- 0.050
 mean_var=119.7444+/-23.206, 0's: 0 Z-trim(110.6): 20  B-trim: 11 in 1/54
 Lambda= 0.117205
 statistics sampled from 11710 (11713) to 11710 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.714), E-opt: 0.2 (0.36), width:  16
 Scan time:  3.410

The best scores are:                                      opt bits E(32554)
CCDS42232.1 METTL16 gene_id:79066|Hs108|chr17      ( 562) 3777 649.8 2.4e-186


>>CCDS42232.1 METTL16 gene_id:79066|Hs108|chr17           (562 aa)
 initn: 3777 init1: 3777 opt: 3777  Z-score: 3458.8  bits: 649.8 E(32554): 2.4e-186
Smith-Waterman score: 3777; 100.0% identity (100.0% similar) in 562 aa overlap (1-562:1-562)

               10        20        30        40        50        60
pF1KE1 MALSKSMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MALSKSMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 GATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 RLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 KRRKLEKPRKPITFVVLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLKVQHKRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KRRKLEKPRKPITFVVLASVMKELSLKASPLRSETAEGIVVVTTWIEKILTDLKVQHKRV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 PCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PCGKEEVSLFLTAIENSWIHLRRKKRERVRQLREVPRAPEDVIQALEEKKPTPKESGNSQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE1 ELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERSEEKGGVEVLESC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ELARGPQERTPCGPALREGEAAAVEGPCPSQESLSQEENPEPTEDERSEEKGGVEVLESC
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE1 QGSSNGAQDQEASEQFGSPVAERGKRLPGVAGQYLFKCLINVKKEVDDALVEMHWVEGQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QGSSNGAQDQEASEQFGSPVAERGKRLPGVAGQYLFKCLINVKKEVDDALVEMHWVEGQN
              490       500       510       520       530       540

              550       560  
pF1KE1 RDLMNQLCTYIRNQIFRLVAVN
       ::::::::::::::::::::::
CCDS42 RDLMNQLCTYIRNQIFRLVAVN
              550       560  




562 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 11:04:50 2016 done: Sun Nov  6 11:04:51 2016
 Total Scan time:  3.410 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]