Result of FASTA (ccds) for
pFN21AE1957
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1957, 512 aa
1>>>pF1KE1957 512 - 512 aa - 512 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3446+/-0.000855; mu= 14.0625+/- 0.052
mean_var=94.2312+/-18.666, 0's: 0 Z-trim(109.2): 10 B-trim: 0 in 0/51
Lambda= 0.132123
statistics sampled from 10748 (10755) to 10748 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.33), width: 16
Scan time: 3.210
The best scores are: opt bits E(32554)
CCDS10856.1 DPEP3 gene_id:64180|Hs108|chr16 ( 513) 3339 646.7 1.9e-185
CCDS10857.1 DPEP2 gene_id:64174|Hs108|chr16 ( 486) 2161 422.1 6.9e-118
CCDS10982.1 DPEP1 gene_id:1800|Hs108|chr16 ( 411) 1147 228.8 9.2e-60
>>CCDS10856.1 DPEP3 gene_id:64180|Hs108|chr16 (513 aa)
initn: 2190 init1: 2190 opt: 3339 Z-score: 3443.1 bits: 646.7 E(32554): 1.9e-185
Smith-Waterman score: 3339; 99.8% identity (99.8% similar) in 513 aa overlap (1-512:1-513)
10 20 30 40 50 60
pF1KE1 MIRTPLSASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MIRTPLSASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 GHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLI
250 260 270 280 290 300
310 320 330 340 350
pF1KE1 RRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLK-NGGIVMVTLSMGVLQCNLLANV
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS10 RRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKKNGGIVMVTLSMGVLQCNLLANV
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE1 STVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 STVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQG
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE1 VLRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHLVPQNGHQATHLEVTKQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VLRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHLVPQNGHQATHLEVTKQP
430 440 450 460 470 480
480 490 500 510
pF1KE1 TNRVPWRSSNASPYLVPGLVAAATIPTFTQWLC
:::::::::::::::::::::::::::::::::
CCDS10 TNRVPWRSSNASPYLVPGLVAAATIPTFTQWLC
490 500 510
>>CCDS10857.1 DPEP2 gene_id:64174|Hs108|chr16 (486 aa)
initn: 2068 init1: 1236 opt: 2161 Z-score: 2229.9 bits: 422.1 E(32554): 6.9e-118
Smith-Waterman score: 2161; 69.4% identity (85.8% similar) in 494 aa overlap (26-511:1-486)
10 20 30 40 50 60
pF1KE1 MIRTPLSASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTR
:::.: :: ...: : :::::::: ::::
CCDS10 MQPSGLEGPGTFGRWPLLSLLLLLLLL---QPVTC
10 20 30
70 80 90 100 110 120
pF1KE1 AETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVD
: :::: ::::.:::.: : ::. . :. :: ..:.: :. .:.::::.:::::
CCDS10 AYTTPGPPRALTTLGAPRAHTMPGTYA----PS-TTLSSPSTQGLQEQARALMRDFPLVD
40 50 60 70 80
130 140 150 160 170 180
pF1KE1 GHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVR
:::::: :::: :.. ::::::::::.:::::::::::::::::::: : ::.::. :.:
CCDS10 GHNDLPLVLRQVYQKGLQDVNLRNFSYGQTSLDRLRDGLVGAQFWSAYVPCQTQDRDALR
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE1 LALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLG
:.:::::::.:::::::::::::::..::..::::::::::::::::.:::.::.::.::
CCDS10 LTLEQIDLIRRMCASYSELELVTSAKALNDTQKLACLIGVEGGHSLDNSLSILRTFYMLG
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE1 VRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLI
::::::: ::.:::::::.: : .:.:.::::.:::::: :.::::::.:::..::..
CCDS10 VRYLTLTHTCNTPWAESSAKGVHSFYNNISGLTDFGEKVVAEMNRLGMMVDLSHVSDAVA
210 220 230 240 250 260
310 320 330 340 350
pF1KE1 RRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLK-NGGIVMVTLSMGVLQCNLLANV
::.::::::::::::::::.::.. ::::::::::: :::.:::.:::::.::: :::
CCDS10 RRALEVSQAPVIFSHSAARGVCNSARNVPDDILQLLKKNGGVVMVSLSMGVIQCNPSANV
270 280 290 300 310 320
360 370 380 390 400 410
pF1KE1 STVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQG
::::::::::.:::::.::::::.:::.:.:::::::::::::::::::::.::::::::
CCDS10 STVADHFDHIKAVIGSKFIGIGGDYDGAGKFPQGLEDVSTYPVLIEELLSRGWSEEELQG
330 340 350 360 370 380
420 430 440 450 460 470
pF1KE1 VLRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHL--VPQNGHQATHLEVTK
::::::::::::::::.::.. :::.: .:: :::.:::: : . : .. :.:.
CCDS10 VLRGNLLRVFRQVEKVQEENKWQSPLEDKFPDEQLSSSCHSDLSRLRQRQSLTSGQELTE
390 400 410 420 430 440
480 490 500 510
pF1KE1 QP---TNRVP--WRSSNASPYLVPGLVAAATIPTFTQWLC
: : ..: : :..::...: :...::.:.. ::
CCDS10 IPIHWTAKLPAKWSVSESSPHMAPVLAVVATFPVLILWL
450 460 470 480
>>CCDS10982.1 DPEP1 gene_id:1800|Hs108|chr16 (411 aa)
initn: 1096 init1: 443 opt: 1147 Z-score: 1186.4 bits: 228.8 E(32554): 9.2e-60
Smith-Waterman score: 1147; 47.7% identity (76.3% similar) in 375 aa overlap (105-472:19-391)
80 90 100 110 120 130
pF1KE1 GSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVDGHNDLPQVLRQRYK
.: .:. .::. :..::::::: : . ..
CCDS10 MWSGWWLWPLVAVCTADFFRDEAERIMRDSPVIDGHNDLPWQLLDMFN
10 20 30 40
140 150 160 170 180 190
pF1KE1 NVLQD--VNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVRLALEQIDLIHRM
: ::: .:: ... .:.. .:: :.::.::::. . :..:.. ::: .:::.:..:::
CCDS10 NRLQDERANLTTLAGTHTNIPKLRAGFVGGQFWSVYTPCDTQNKDAVRRTLEQMDVVHRM
50 60 70 80 90 100
200 210 220 230 240
pF1KE1 CASYSELEL-VTSAEGLNSS---QKLACLIGVEGGHSLDSSLSVLRSFYVLGVRYLTLTF
: : : : :::. :. .. :.: :::::::::.::::.:::..: ::.::::::
CCDS10 CRMYPETFLYVTSSAGIRQAFREGKVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLTH
110 120 130 140 150 160
250 260 270 280 290 300
pF1KE1 TCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLIRRVLEVSQ
.:.::::.. . .::. ::..::.::::::..:::...: . .. .:..:.
CCDS10 SCNTPWADNWLVDTGDSEPQSQGLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSR
170 180 190 200 210 220
310 320 330 340 350 360
pF1KE1 APVIFSHSAARAVCDNLLNVPDDILQLLKN-GGIVMVTLSMGVLQCNLLANVSTVADHFD
::::::::.: .:: . :::::.:.:.:. ..:::.. . ..:. ::.: ::::.:
CCDS10 APVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCTNKANLSQVADHLD
230 240 250 260 270 280
370 380 390 400 410 420
pF1KE1 HIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGVLRGNLLR
::. : :.. .:.::..::. : :.:::::: :: :: ::: :.:.: :..:.: ::::
CCDS10 HIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEAEVKGALADNLLR
290 300 310 320 330 340
430 440 450 460 470 480
pF1KE1 VFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHLVPQNGHQATHLEVTKQPTNRVPWRS
::. ::.. . . :.: : .: ::. ::..: ..: .. :
CCDS10 VFEAVEQASNLT--QAPEEEPIPLDQLGGSCRTHYGYSSGASSLHRHWGLLLASLAPLVL
350 360 370 380 390 400
490 500 510
pF1KE1 SNASPYLVPGLVAAATIPTFTQWLC
CCDS10 CLSLL
410
512 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:50:43 2016 done: Sun Nov 6 21:50:43 2016
Total Scan time: 3.210 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]