Result of FASTA (ccds) for
pFN21AE1949
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1949, 504 aa
1>>>pF1KE1949 504 - 504 aa - 504 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0661+/-0.000884; mu= 10.0646+/- 0.053
mean_var=107.4322+/-21.266, 0's: 0 Z-trim(109.3): 30 B-trim: 0 in 0/51
Lambda= 0.123739
statistics sampled from 10810 (10820) to 10810 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.702), E-opt: 0.2 (0.332), width: 16
Scan time: 3.540
The best scores are: opt bits E(32554)
CCDS13993.1 TAB1 gene_id:10454|Hs108|chr22 ( 504) 3292 598.4 6e-171
CCDS13992.1 TAB1 gene_id:10454|Hs108|chr22 ( 462) 2828 515.6 4.8e-146
>>CCDS13993.1 TAB1 gene_id:10454|Hs108|chr22 (504 aa)
initn: 3292 init1: 3292 opt: 3292 Z-score: 3182.5 bits: 598.4 E(32554): 6e-171
Smith-Waterman score: 3292; 100.0% identity (100.0% similar) in 504 aa overlap (1-504:1-504)
10 20 30 40 50 60
pF1KE1 MAAQRRSLLQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MAAQRRSLLQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSEN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 ANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQEST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQEST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 GPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LVRNFGYPLGEMSQPTPSPAPAAGGRVYPVSVPYSSAQSTSKTSVTLSLVMPSQGQMVNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LVRNFGYPLGEMSQPTPSPAPAAGGRVYPVSVPYSSAQSTSKTSVTLSLVMPSQGQMVNG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 AHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPAHSLPPGEDGRVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPAHSLPPGEDGRVEP
430 440 450 460 470 480
490 500
pF1KE1 YVDFAEFYRLWSVDHGEQSVVTAP
::::::::::::::::::::::::
CCDS13 YVDFAEFYRLWSVDHGEQSVVTAP
490 500
>>CCDS13992.1 TAB1 gene_id:10454|Hs108|chr22 (462 aa)
initn: 2826 init1: 2826 opt: 2828 Z-score: 2735.5 bits: 515.6 E(32554): 4.8e-146
Smith-Waterman score: 2828; 99.1% identity (99.8% similar) in 440 aa overlap (1-440:1-439)
10 20 30 40 50 60
pF1KE1 MAAQRRSLLQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MAAQRRSLLQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSEN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 IDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 ANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQEST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQEST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 RRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 GPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 LVRNFGYPLGEMSQPTPSPAPAAGGRVYPVSVPYSSAQSTSKTSVTLSLVMPSQGQMVNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LVRNFGYPLGEMSQPTPSPAPAAGGRVYPVSVPYSSAQSTSKTSVTLSLVMPSQGQMVNG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 AHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPAHSLPPGEDGRVEP
::::::::::::::: ..:.
CCDS13 AHSASTLDEATPTLT-KDPSRPASDLTAIPQCQLNLLGSLTPG
430 440 450 460
504 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 09:45:32 2016 done: Sun Nov 6 09:45:33 2016
Total Scan time: 3.540 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]