FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1941, 491 aa
  1>>>pF1KE1941 491 - 491 aa - 491 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6257+/-0.000969; mu= 15.9886+/- 0.058
 mean_var=61.4054+/-12.207, 0's: 0 Z-trim(103.3): 22  B-trim: 4 in 1/51
 Lambda= 0.163671
 statistics sampled from 7348 (7351) to 7348 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.226), width:  16
 Scan time:  2.800

The best scores are:                                      opt bits E(32554)
CCDS5737.1 NAMPT gene_id:10135|Hs108|chr7          ( 491) 3254 777.2       0


>>CCDS5737.1 NAMPT gene_id:10135|Hs108|chr7               (491 aa)
 initn: 3254 init1: 3254 opt: 3254  Z-score: 4149.3  bits: 777.2 E(32554):    0
Smith-Waterman score: 3254; 100.0% identity (100.0% similar) in 491 aa overlap (1-491:1-491)

               10        20        30        40        50        60
pF1KE1 MNPAAEAEFNILLATDSYKVTHYKQYPPNTSKVYSYFECREKKTENSKLRKVKYEETVFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 MNPAAEAEFNILLATDSYKVTHYKQYPPNTSKVYSYFECREKKTENSKLRKVKYEETVFY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 GLQYILNKYLKGKVVTKEKIQEAKDVYKEHFQDDVFNEKGWNYILEKYDGHLPIEIKAVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 GLQYILNKYLKGKVVTKEKIQEAKDVYKEHFQDDVFNEKGWNYILEKYDGHLPIEIKAVP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 EGFVIPRGNVLFTVENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLETS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 EGFVIPRGNVLFTVENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLETS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 GNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKGTDTVAGLALIKKYYGTKDPVPGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 GNLDGLEYKLHDFGYRGVSSQETAGIGASAHLVNFKGTDTVAGLALIKKYYGTKDPVPGY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 SVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 SVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVPVSVVSDSYDIYNACEKIWGEDLRHLIV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 SRSTQAPLIIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 SRSTQAPLIIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 LQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 LQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVAD
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE1 PNKRSKKGRLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSYSFDEIRKNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 PNKRSKKGRLSLHRTPAGNFVTLEEGKGDLEEYGQDLLHTVFKNGKVTKSYSFDEIRKNA
              430       440       450       460       470       480

              490 
pF1KE1 QLNIELEAAHH
       :::::::::::
CCDS57 QLNIELEAAHH
              490 




491 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 16:20:16 2016 done: Sun Nov  6 16:20:17 2016
 Total Scan time:  2.800 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]