Result of FASTA (ccds) for
pFN21AE1931
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1931, 445 aa
1>>>pF1KE1931 445 - 445 aa - 445 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4042+/-0.000735; mu= 18.5224+/- 0.044
mean_var=88.7882+/-17.651, 0's: 0 Z-trim(111.7): 21 B-trim: 0 in 0/51
Lambda= 0.136112
statistics sampled from 12616 (12628) to 12616 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.388), width: 16
Scan time: 3.370
The best scores are: opt bits E(32554)
CCDS41675.1 PELI3 gene_id:246330|Hs108|chr11 ( 445) 3142 626.7 1.5e-179
CCDS31615.1 PELI3 gene_id:246330|Hs108|chr11 ( 469) 2801 559.7 2.2e-159
CCDS73328.1 PELI3 gene_id:246330|Hs108|chr11 ( 406) 2550 510.4 1.3e-144
CCDS9726.1 PELI2 gene_id:57161|Hs108|chr14 ( 420) 2156 433.0 2.7e-121
CCDS1876.1 PELI1 gene_id:57162|Hs108|chr2 ( 418) 2138 429.5 3.1e-120
>>CCDS41675.1 PELI3 gene_id:246330|Hs108|chr11 (445 aa)
initn: 3142 init1: 3142 opt: 3142 Z-score: 3337.2 bits: 626.7 E(32554): 1.5e-179
Smith-Waterman score: 3142; 100.0% identity (100.0% similar) in 445 aa overlap (1-445:1-445)
10 20 30 40 50 60
pF1KE1 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGYNGCLASGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGYNGCLASGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIVEYTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIVEYTH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 DSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSAQSTISRYACRILCDRRPPYTARIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSAQSTISRYACRILCDRRPPYTARIY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 AAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 VYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 ANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQEREC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQEREC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 PLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFHA
370 380 390 400 410 420
430 440
pF1KE1 ACPFCGAWLTGEHGCVRLIFQGPLD
:::::::::::::::::::::::::
CCDS41 ACPFCGAWLTGEHGCVRLIFQGPLD
430 440
>>CCDS31615.1 PELI3 gene_id:246330|Hs108|chr11 (469 aa)
initn: 3128 init1: 2794 opt: 2801 Z-score: 2975.0 bits: 559.7 E(32554): 2.2e-159
Smith-Waterman score: 3084; 94.9% identity (94.9% similar) in 469 aa overlap (1-445:1-469)
10 20 30 40 50
pF1KE1 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLG---------
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGCCEEGGEET
10 20 30 40 50 60
60 70 80 90
pF1KE1 ---------------YNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKAL
:::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EAQRGEVTGPRAHSCYNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKAL
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 SNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE1 QSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLV
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE1 MHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGAT
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE1 LLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYV
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE1 RCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH
370 380 390 400 410 420
400 410 420 430 440
pF1KE1 VCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD
430 440 450 460
>>CCDS73328.1 PELI3 gene_id:246330|Hs108|chr11 (406 aa)
initn: 2550 init1: 2550 opt: 2550 Z-score: 2709.5 bits: 510.4 E(32554): 1.3e-144
Smith-Waterman score: 2787; 91.2% identity (91.2% similar) in 445 aa overlap (1-445:1-406)
10 20 30 40 50 60
pF1KE1 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGYNGCLASGD
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELI------------
10 20 30 40
70 80 90 100 110 120
pF1KE1 KGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIVEYTH
:::::::::::::::::::::::::::::::::
CCDS73 ---------------------------STPLVSKALSNRGQHSISYTLSRSHSVIVEYTH
50 60 70 80
130 140 150 160 170 180
pF1KE1 DSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSAQSTISRYACRILCDRRPPYTARIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSAQSTISRYACRILCDRRPPYTARIY
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE1 AAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGN
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE1 VYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQE
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE1 ANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQEREC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQEREC
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE1 PLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFHA
330 340 350 360 370 380
430 440
pF1KE1 ACPFCGAWLTGEHGCVRLIFQGPLD
:::::::::::::::::::::::::
CCDS73 ACPFCGAWLTGEHGCVRLIFQGPLD
390 400
>>CCDS9726.1 PELI2 gene_id:57161|Hs108|chr14 (420 aa)
initn: 1995 init1: 1037 opt: 2156 Z-score: 2291.2 bits: 433.0 E(32554): 2.7e-121
Smith-Waterman score: 2156; 71.1% identity (89.5% similar) in 419 aa overlap (30-445:3-420)
10 20 30 40 50
pF1KE1 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQ--PGEEPIKYGELIVLGYNGCLAS
:::.. . :..::.:::::.:::::: : .
CCDS97 MFSPGQEEHCAPNKEPVKYGELVVLGYNGALPN
10 20 30
60 70 80 90 100 110
pF1KE1 GDKGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIVEY
::.:::.::.:: .: .::::::...: :::: .:::.: .:::::::::::...:.:::
CCDS97 GDRGRRKSRFALYKRPKANGVKPSTVHVISTPQASKAISCKGQHSISYTLSRNQTVVVEY
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE1 THDSDTDMFQIGRSTENMIDFVVTDTSPGG-GAAEGPSAQSTISRYACRILCDRRPPYTA
:::.::::::.:::::. :::::::: :. .. :. .::::::.::::.::: ::::
CCDS97 THDKDTDMFQVGRSTESPIDFVVTDTISGSQNTDEAQITQSTISRFACRIVCDRNEPYTA
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE1 RIYAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISV
::.:::::.:.::::::.::::..::: :::::::::::::: :::.:.: :::::::::
CCDS97 RIFAAGFDSSKNIFLGEKAAKWKNPDGHMDGLTTNGVLVMHPRGGFTEESQPGVWREISV
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE1 CGNVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQ
::.:::::..:::::::::::.:.:::::::::::::::::::: ::...:: :..::
CCDS97 CGDVYTLRETRSAQQRGKLVESETNVLQDGSLIDLCGATLLWRTADGLFHTPTQKHIEAL
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE1 RQEANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQE
::: :::::::::::.:::::: : ... .:: ::.:. ::::::::.:: : . .:
CCDS97 RQEINAARPQCPVGLNTLAFPSINRKEVVEEKQ-PWAYLSCGHVHGYHNWGHRSDTEANE
280 290 300 310 320 330
360 370 380 390 400 410
pF1KE1 RECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHA
::::.:: :::::::::: :::. .: :::.:::.:::::::::.:.::.: ::::::::
CCDS97 RECPMCRTVGPYVPLWLGCEAGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHA
340 350 360 370 380 390
420 430 440
pF1KE1 FHAACPFCGAWLTGEHGCVRLIFQGPLD
::::::::.. :.::..:..::::::.:
CCDS97 FHAACPFCATQLVGEQNCIKLIFQGPID
400 410 420
>>CCDS1876.1 PELI1 gene_id:57162|Hs108|chr2 (418 aa)
initn: 1061 init1: 1061 opt: 2138 Z-score: 2272.1 bits: 429.5 E(32554): 3.1e-120
Smith-Waterman score: 2138; 70.5% identity (88.5% similar) in 417 aa overlap (30-445:3-418)
10 20 30 40 50 60
pF1KE1 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGYNGCLASGD
:: .. .:.. :.:::::::::::: : .::
CCDS18 MFSPDQENHPSKAPVKYGELIVLGYNGSLPNGD
10 20 30
70 80 90 100 110 120
pF1KE1 KGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIVEYTH
.:::.::.:: .: .::::::...: :: ..::.::. ::::::::::...:.:::::
CCDS18 RGRRKSRFALFKRPKANGVKPSTVHIACTPQAAKAISNKDQHSISYTLSRAQTVVVEYTH
40 50 60 70 80 90
130 140 150 160 170
pF1KE1 DSDTDMFQIGRSTENMIDFVVTDTSPGGGA-AEGPSAQSTISRYACRILCDRRPPYTARI
::.:::::::::::. :::::::: ::. . .. :.::::::.::::.:.: ::.::::
CCDS18 DSNTDMFQIGRSTESPIDFVVTDTVPGSQSNSDTQSVQSTISRFACRIICERNPPFTARI
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE1 YAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCG
::::::.:.::::::.::::.: :: :::::::::::::: .::.::: ::.::::::::
CCDS18 YAAGFDSSKNIFLGEKAAKWKTSDGQMDGLTTNGVLVMHPRNGFTEDSKPGIWREISVCG
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE1 NVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQ
::..::..::::::::.:: :.: :::::::::::::::::: :: ..::.:.::: ::
CCDS18 NVFSLRETRSAQQRGKMVEIETNQLQDGSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQ
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE1 EANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQERE
: ::::::::::..:::::: : . . :..:::::. ::::::::.:: ..:: ..::
CCDS18 EINAARPQCPVGFNTLAFPSMKR-KDVVDEKQPWVYLNCGHVHGYHNWGNKEERDGKDRE
280 290 300 310 320 330
360 370 380 390 400 410
pF1KE1 CPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFH
::.:: :::::::::: :::. .: :::.:::.::::::::::. ::.: :::::::.::
CCDS18 CPMCRSVGPYVPLWLGCEAGFYVDAGPPTHAFSPCGHVCSEKTTAYWSQIPLPHGTHTFH
340 350 360 370 380 390
420 430 440
pF1KE1 AACPFCGAWLTGEHGCVRLIFQGPLD
::::::. :.::.: .:::::::::
CCDS18 AACPFCAHQLAGEQGYIRLIFQGPLD
400 410
445 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 12:33:02 2016 done: Sun Nov 6 12:33:03 2016
Total Scan time: 3.370 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]