Result of FASTA (ccds) for
pFN21AE1922
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1922, 434 aa
1>>>pF1KE1922 434 - 434 aa - 434 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5022+/-0.000895; mu= 4.1476+/- 0.054
mean_var=183.6410+/-36.922, 0's: 0 Z-trim(112.7): 28 B-trim: 174 in 1/51
Lambda= 0.094643
statistics sampled from 13443 (13461) to 13443 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.754), E-opt: 0.2 (0.413), width: 16
Scan time: 3.440
The best scores are: opt bits E(32554)
CCDS44860.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 434) 2896 407.4 1.4e-113
CCDS31777.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 458) 1981 282.5 5.8e-76
CCDS55817.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 319) 1903 271.8 7e-73
CCDS8741.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 367) 1744 250.1 2.7e-66
CCDS41773.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 374) 1744 250.1 2.7e-66
CCDS44861.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 348) 1018 151.0 1.8e-36
>>CCDS44860.1 PPHLN1 gene_id:51535|Hs108|chr12 (434 aa)
initn: 2896 init1: 2896 opt: 2896 Z-score: 2152.8 bits: 407.4 E(32554): 1.4e-113
Smith-Waterman score: 2896; 99.8% identity (99.8% similar) in 434 aa overlap (1-434:1-434)
10 20 30 40 50 60
pF1KE1 MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 GASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIESAGQTWQQVPPVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIESAGQTWQQVPPVR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 NTEMDHDGTPENEGEETAQSALFGFQHDASNHTIVGLGPNPVPEMKETTLQAPQPPQAPQ
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS44 NTEMDHDGTPENEGEETAQSALFGFQHDASNHTIVGLGPNQVPEMKETTLQAPQPPQAPQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 PLQPRKKRVRRTTQLRRTTGAPDITWGMLKKTTQEAERILLRTQTPFTPENLFLAMLSVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PLQPRKKRVRRTTQLRRTTGAPDITWGMLKKTTQEAERILLRTQTPFTPENLFLAMLSVV
370 380 390 400 410 420
430
pF1KE1 HCNSRKDVKPENKQ
::::::::::::::
CCDS44 HCNSRKDVKPENKQ
430
>>CCDS31777.1 PPHLN1 gene_id:51535|Hs108|chr12 (458 aa)
initn: 2014 init1: 1967 opt: 1981 Z-score: 1477.2 bits: 282.5 E(32554): 5.8e-76
Smith-Waterman score: 2465; 88.9% identity (90.8% similar) in 434 aa overlap (2-434:61-458)
10 20 30
pF1KE1 MWSEGR-YEYERIPRERAPPRSHPSDESGYR
..::: . ..: . .:: : .::::::
CCDS31 VNIVPKKPPLLDRPGEGSYNRYYSHVDYRDYDEGRSFSHDR---RSGPP--HRGDESGYR
40 50 60 70 80
40 50 60 70 80 90
pF1KE1 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE1 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE1 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT
210 220 230 240 250 260
220 230 240 250 260 270
pF1KE1 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS
270 280 290 300 310 320
280 290 300 310 320 330
pF1KE1 LEKSIQFALRQNLHEIESAGQTWQQVPPVRNTEMDHDGTPENEGEETAQSALFGFQHDAS
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LEKSIQFALRQNLHEIESAGQTWQQVPPVRNTEMDHDGTPENEGEETAQSA---------
330 340 350 360 370
340 350 360 370 380 390
pF1KE1 NHTIVGLGPNPVPEMKETTLQAPQPPQAPQPLQPRKKRVRRTTQLRRTTGAPDITWGMLK
::::::::::::::::::::::::::::::::::::::
CCDS31 ----------------------PQPPQAPQPLQPRKKRVRRTTQLRRTTGAPDITWGMLK
380 390 400 410
400 410 420 430
pF1KE1 KTTQEAERILLRTQTPFTPENLFLAMLSVVHCNSRKDVKPENKQ
::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KTTQEAERILLRTQTPFTPENLFLAMLSVVHCNSRKDVKPENKQ
420 430 440 450
>>CCDS55817.1 PPHLN1 gene_id:51535|Hs108|chr12 (319 aa)
initn: 1898 init1: 1898 opt: 1903 Z-score: 1421.9 bits: 271.8 E(32554): 7e-73
Smith-Waterman score: 1903; 92.4% identity (95.6% similar) in 315 aa overlap (1-315:8-317)
10 20 30 40 50
pF1KE1 MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRR
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 KSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 HRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 HRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 LAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 TRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIESAGQTW
::::::::::::::::::::::::::::::::::::::::::::::::::::: :.
CCDS55 TRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI---GE--
250 260 270 280 290
300 310 320 330 340 350
pF1KE1 QQVPPVRNTEMDHDGTPENEGEETAQSALFGFQHDASNHTIVGLGPNPVPEMKETTLQAP
. : ... ..: . .. ::
CCDS55 RCVEELKHFIAEYDTSTQDFGEPF
300 310
>>CCDS8741.1 PPHLN1 gene_id:51535|Hs108|chr12 (367 aa)
initn: 1725 init1: 1725 opt: 1744 Z-score: 1303.7 bits: 250.1 E(32554): 2.7e-66
Smith-Waterman score: 1744; 87.0% identity (92.7% similar) in 315 aa overlap (2-315:61-365)
10 20 30
pF1KE1 MWSEGR-YEYERIPRERAPPRSHPSDESGYR
..::: . ..: . .:: : .::::::
CCDS87 VNIVPKKPPLLDRPGEGSYNRYYSHVDYRDYDEGRSFSHDR---RSGPP--HRGDESGYR
40 50 60 70 80
40 50 60 70 80 90
pF1KE1 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE1 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE1 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT
210 220 230 240 250 260
220 230 240 250 260 270
pF1KE1 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS
270 280 290 300 310 320
280 290 300 310 320 330
pF1KE1 LEKSIQFALRQNLHEIESAGQTWQQVPPVRNTEMDHDGTPENEGEETAQSALFGFQHDAS
:::::::::::::::: :. . : ... ..: . .. ::
CCDS87 LEKSIQFALRQNLHEI---GE--RCVEELKHFIAEYDTSTQDFGEPF
330 340 350 360
340 350 360 370 380 390
pF1KE1 NHTIVGLGPNPVPEMKETTLQAPQPPQAPQPLQPRKKRVRRTTQLRRTTGAPDITWGMLK
>>CCDS41773.1 PPHLN1 gene_id:51535|Hs108|chr12 (374 aa)
initn: 1725 init1: 1725 opt: 1744 Z-score: 1303.6 bits: 250.1 E(32554): 2.7e-66
Smith-Waterman score: 1744; 87.0% identity (92.7% similar) in 315 aa overlap (2-315:68-372)
10 20 30
pF1KE1 MWSEGR-YEYERIPRERAPPRSHPSDESGYR
..::: . ..: . .:: : .::::::
CCDS41 VNIVPKKPPLLDRPGEGSYNRYYSHVDYRDYDEGRSFSHDR---RSGPP--HRGDESGYR
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE1 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE1 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE1 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT
220 230 240 250 260 270
220 230 240 250 260 270
pF1KE1 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS
280 290 300 310 320 330
280 290 300 310 320 330
pF1KE1 LEKSIQFALRQNLHEIESAGQTWQQVPPVRNTEMDHDGTPENEGEETAQSALFGFQHDAS
:::::::::::::::: :. . : ... ..: . .. ::
CCDS41 LEKSIQFALRQNLHEI---GE--RCVEELKHFIAEYDTSTQDFGEPF
340 350 360 370
340 350 360 370 380 390
pF1KE1 NHTIVGLGPNPVPEMKETTLQAPQPPQAPQPLQPRKKRVRRTTQLRRTTGAPDITWGMLK
>>CCDS44861.1 PPHLN1 gene_id:51535|Hs108|chr12 (348 aa)
initn: 1158 init1: 954 opt: 1018 Z-score: 768.3 bits: 151.0 E(32554): 1.8e-36
Smith-Waterman score: 1566; 73.0% identity (76.0% similar) in 366 aa overlap (5-315:5-346)
10 20
pF1KE1 MWSEGRYEYERIPRERAPPRSHPSD-----------------------------------
:::::::::::::::::::::
CCDS44 MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD
10 20 30 40 50 60
30 40 50 60
pF1KE1 --------------------ESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER
::::::::::::::::::::::::::::::::::::::::
CCDS44 YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER
70 80 90 100 110 120
70 80 90 100 110 120
pF1KE1 SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR----------
130 140 150 160 170
130 140 150 160 170 180
pF1KE1 RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK
.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ---------NKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK
180 190 200 210 220
190 200 210 220 230 240
pF1KE1 LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE
230 240 250 260 270 280
250 260 270 280 290 300
pF1KE1 IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIESAGQTWQQVPPVRNTEMD
::::::::::::::::::::::::::::::::::::::::: :. . : ... .
CCDS44 IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI---GE--RCVEELKHFIAE
290 300 310 320 330
310 320 330 340 350 360
pF1KE1 HDGTPENEGEETAQSALFGFQHDASNHTIVGLGPNPVPEMKETTLQAPQPPQAPQPLQPR
.: . .. ::
CCDS44 YDTSTQDFGEPF
340
434 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:53:07 2016 done: Sun Nov 6 14:53:07 2016
Total Scan time: 3.440 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]