Result of FASTA (omim) for
pFN21AE1901
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1901, 429 aa
1>>>pF1KE1901 429 - 429 aa - 429 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1350+/-0.000406; mu= 18.1288+/- 0.025
mean_var=64.7931+/-12.761, 0's: 0 Z-trim(111.3): 36 B-trim: 1115 in 1/53
Lambda= 0.159335
statistics sampled from 19874 (19909) to 19874 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.595), E-opt: 0.2 (0.233), width: 16
Scan time: 8.490
The best scores are: opt bits E(85289)
NP_004292 (OMIM: 604958) actin-like protein 6A iso ( 429) 2901 676.0 5.2e-194
NP_829888 (OMIM: 604958) actin-like protein 6A iso ( 387) 2612 609.5 4.7e-174
NP_817126 (OMIM: 604958) actin-like protein 6A iso ( 387) 2612 609.5 4.7e-174
NP_057272 (OMIM: 612458) actin-like protein 6B [Ho ( 426) 2505 584.9 1.3e-166
NP_005712 (OMIM: 604222) actin-related protein 3 i ( 418) 379 96.2 1.7e-19
NP_005150 (OMIM: 102540,612098,612794,613424) acti ( 377) 366 93.2 1.2e-18
NP_001091 (OMIM: 102610,161800,255310,616852) acti ( 377) 366 93.2 1.2e-18
NP_001606 (OMIM: 102545) actin, gamma-enteric smoo ( 376) 363 92.5 2e-18
NP_001135417 (OMIM: 102620,611788,613834,614042) a ( 377) 363 92.5 2e-18
NP_001307784 (OMIM: 102620,611788,613834,614042) a ( 377) 363 92.5 2e-18
NP_001604 (OMIM: 102620,611788,613834,614042) acti ( 377) 363 92.5 2e-18
NP_001186883 (OMIM: 102560,604717,614583) actin, c ( 375) 361 92.0 2.7e-18
NP_001605 (OMIM: 102560,604717,614583) actin, cyto ( 375) 361 92.0 2.7e-18
NP_001092 (OMIM: 102630,243310,607371,608578) acti ( 375) 361 92.0 2.7e-18
NP_001017992 (OMIM: 614835) beta-actin-like protei ( 376) 352 90.0 1.1e-17
NP_001264069 (OMIM: 604222) actin-related protein ( 367) 348 89.1 2.1e-17
XP_016858605 (OMIM: 605144) PREDICTED: beta-centra ( 332) 342 87.6 5e-17
NP_005726 (OMIM: 605144) beta-centractin [Homo sap ( 376) 342 87.7 5.5e-17
NP_005727 (OMIM: 605143) alpha-centractin [Homo sa ( 376) 337 86.5 1.2e-16
XP_005263911 (OMIM: 605144) PREDICTED: beta-centra ( 302) 332 85.3 2.3e-16
XP_016859649 (OMIM: 608914) PREDICTED: POTE ankyri ( 657) 331 85.3 5.1e-16
XP_011509518 (OMIM: 608914) PREDICTED: POTE ankyri ( 957) 331 85.4 6.9e-16
XP_016859648 (OMIM: 608914) PREDICTED: POTE ankyri ( 967) 331 85.4 6.9e-16
NP_001077007 (OMIM: 608914) POTE ankyrin domain fa (1075) 331 85.4 7.6e-16
XP_016859650 (OMIM: 608914) PREDICTED: POTE ankyri (1075) 331 85.4 7.6e-16
NP_115876 (OMIM: 608534) actin-related protein T3 ( 372) 319 82.4 2.1e-15
NP_536356 (OMIM: 608535) actin-related protein T2 ( 377) 315 81.5 4.1e-15
NP_001005386 (OMIM: 604221) actin-related protein ( 399) 312 80.8 6.9e-15
NP_001186822 (OMIM: 102545) actin, gamma-enteric s ( 333) 310 80.3 8.2e-15
NP_612146 (OMIM: 300487) actin-related protein T1 ( 376) 310 80.3 9.1e-15
NP_005713 (OMIM: 604221) actin-related protein 2 i ( 394) 300 78.0 4.6e-14
NP_006677 (OMIM: 604304) actin-like protein 7B [Ho ( 415) 283 74.1 7.3e-13
NP_006678 (OMIM: 604303) actin-like protein 7A [Ho ( 435) 273 71.9 3.7e-12
>>NP_004292 (OMIM: 604958) actin-like protein 6A isoform (429 aa)
initn: 2901 init1: 2901 opt: 2901 Z-score: 3604.1 bits: 676.0 E(85289): 5.2e-194
Smith-Waterman score: 2901; 100.0% identity (100.0% similar) in 429 aa overlap (1-429:1-429)
10 20 30 40 50 60
pF1KE1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 PVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 EKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 RLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 TDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 TDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGG
370 380 390 400 410 420
pF1KE1 KQCVERKCP
:::::::::
NP_004 KQCVERKCP
>>NP_829888 (OMIM: 604958) actin-like protein 6A isoform (387 aa)
initn: 2612 init1: 2612 opt: 2612 Z-score: 3245.8 bits: 609.5 E(85289): 4.7e-174
Smith-Waterman score: 2612; 100.0% identity (100.0% similar) in 387 aa overlap (43-429:1-387)
20 30 40 50 60 70
pF1KE1 ALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIDT
::::::::::::::::::::::::::::::
NP_829 MVVERDDGSTLMEIDGDKGKQGGPTYYIDT
10 20 30
80 90 100 110 120 130
pF1KE1 NALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_829 NALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAK
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE1 REKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_829 REKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGI
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE1 VKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_829 VKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHN
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE1 YMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_829 YMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPS
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE1 NVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_829 NVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKT
280 290 300 310 320 330
380 390 400 410 420
pF1KE1 PPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_829 PPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
340 350 360 370 380
>>NP_817126 (OMIM: 604958) actin-like protein 6A isoform (387 aa)
initn: 2612 init1: 2612 opt: 2612 Z-score: 3245.8 bits: 609.5 E(85289): 4.7e-174
Smith-Waterman score: 2612; 100.0% identity (100.0% similar) in 387 aa overlap (43-429:1-387)
20 30 40 50 60 70
pF1KE1 ALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIDT
::::::::::::::::::::::::::::::
NP_817 MVVERDDGSTLMEIDGDKGKQGGPTYYIDT
10 20 30
80 90 100 110 120 130
pF1KE1 NALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_817 NALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAK
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE1 REKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_817 REKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGI
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE1 VKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_817 VKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHN
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE1 YMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_817 YMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPS
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE1 NVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_817 NVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKT
280 290 300 310 320 330
380 390 400 410 420
pF1KE1 PPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_817 PPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
340 350 360 370 380
>>NP_057272 (OMIM: 612458) actin-like protein 6B [Homo s (426 aa)
initn: 2209 init1: 2209 opt: 2505 Z-score: 3112.2 bits: 584.9 E(85289): 1.3e-166
Smith-Waterman score: 2505; 83.9% identity (95.6% similar) in 429 aa overlap (1-429:1-426)
10 20 30 40 50 60
pF1KE1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDK
::::::::::::::::::::..::::::::::::.::::..:... .. :. .:..:::
NP_057 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGG--LELEGDK
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 GKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV
:.: ..::::::.:::.. :..:::::::.:::. :.:::::::. ::::: .::::
NP_057 EKKG-KIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAI
::::::::::::::::::::::.:::::::::::::::::::::::::.:::::::::::
NP_057 LMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 PVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRK
::::::::::::::::::::::.:::::::::: :...::::::.:: ::::.: :::.:
NP_057 PVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 EKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAE
::::::..:::::::: ::::::::::::::: :::::::::::::::.::::: :.:::
NP_057 EKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAE
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE1 RLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSF
::.::::::::::::::::::::::.::::::.:::::::::::::::::.:::::.:.:
NP_057 RLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGF
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE1 TDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGG
::::::::::::::::::::::.:.:.::.:: :::::::::::::::::::::::::::
NP_057 TDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGG
360 370 380 390 400 410
pF1KE1 KQCVERKCP
:::::::::
NP_057 KQCVERKCP
420
>>NP_005712 (OMIM: 604222) actin-related protein 3 isofo (418 aa)
initn: 499 init1: 188 opt: 379 Z-score: 471.2 bits: 96.2 E(85289): 1.7e-19
Smith-Waterman score: 514; 27.2% identity (55.7% similar) in 438 aa overlap (13-429:7-412)
10 20 30 40 50 60
pF1KE1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDK
: : : :. .. ::::. :. .:. :. . : . . :
NP_005 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIA-IKESAKVGDQAQRRVMK
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 GKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV
: . ..: .:.. : . :...:.::::: .. ..... ....: :
NP_005 GVDDLD-FFIGDEAIEKPTYATKW--PIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYF
60 70 80 90 100 110
130 140 150 160 170
pF1KE1 LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRS--------TGLILDS
:..: : :: .:: .:.::: .:.:.... :::. :. : :: ..::
NP_005 LLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 GATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREG
: : .::: .:::. . : . :.:: ::. ..:... .. . : . . .::.:
NP_005 GDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKER
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 SPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNG
..:.: ....:. ... : . .: .. . ::
NP_005 ------------------YSYVCPDLVKEFNK--YDTDGSKWIKQYTGINAISKKEF---
240 250 260
300 310 320 330 340 350
pF1KE1 YNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAG
. : : ::. :: .: : . . . .:.:: . : ::.: :: .....:
NP_005 -SIDVGYERFLGPEIFFHPEFA---NPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSG
270 280 290 300 310 320
360 370 380 390
pF1KE1 GNTLIQSFTDRLNRELSQKTPPSMRL-------KLIANNTTVE------RRFSSWIGGSI
:.:....: ::.:.:.. . ..: .: . :. .:.. :.:::.
NP_005 GSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSM
330 340 350 360 370 380
400 410 420
pF1KE1 LASLGTFQQMWISKQEYEEGGKQCVERKCP
::: : :. .:..::: : . . :. :
NP_005 LASTPEFYQVCHTKKDYEEIGPS-ICRHNPVFGVMS
390 400 410
>>NP_005150 (OMIM: 102540,612098,612794,613424) actin, a (377 aa)
initn: 878 init1: 358 opt: 366 Z-score: 455.7 bits: 93.2 E(85289): 1.2e-18
Smith-Waterman score: 853; 36.7% identity (63.6% similar) in 420 aa overlap (9-428:5-376)
10 20 30 40 50 60
pF1KE1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDK
.:. ::: : :: :.::.::.: :.. ::. .: : .: .: :.:
NP_005 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGR--PRHQG--VMVGMGQK
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 GKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV
. :. .: . : . :...:.. .::... : ::. ... ::.
NP_005 DS------YVGDEA-QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPT
60 70 80 90 100
130 140 150 160 170 180
pF1KE1 LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAI
:..::: : .:.:::.:..::: .:.::... :::. .:.::.::..:::: : .
NP_005 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 PVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRK
:...::.: ..:.. ::: .: ... : . .: : .: ::. :
NP_005 PIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFV---TTAEREIVRDI-------K
170 180 190 200 210
250 260 270 280 290 300
pF1KE1 EKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAE
::: : : ::. . ...:. :. ::.:.: .: :
NP_005 EKL-----------CY-VALDFENEMATAASSSSLEK--------SYELPDGQVITIGNE
220 230 240 250
310 320 330 340 350 360
pF1KE1 RLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSF
:.. :: ::.:: . : :. ... .:. :::::: ::.. ...::.:. ..
NP_005 RFRCPETLFQPSFI----GMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGI
260 270 280 290 300 310
370 380 390 400 410 420
pF1KE1 TDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGG
.::...:.. .: .:..:.:: ::..: ::::::::::.::::::::::::.:.:
NP_005 ADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDEAG
320 330 340 350 360
pF1KE1 KQCVERKCP
. :.:::
NP_005 PSIVHRKCF
370
>>NP_001091 (OMIM: 102610,161800,255310,616852) actin, a (377 aa)
initn: 887 init1: 358 opt: 366 Z-score: 455.7 bits: 93.2 E(85289): 1.2e-18
Smith-Waterman score: 856; 36.7% identity (63.6% similar) in 420 aa overlap (9-428:5-376)
10 20 30 40 50 60
pF1KE1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDK
::. ::: : :: :.::.::.: :.. ::. .: : .: .: :.:
NP_001 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGR--PRHQG--VMVGMGQK
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 GKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV
. :. .: . : . :...:.. .::... : ::. ... ::.
NP_001 DS------YVGDEA-QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPT
60 70 80 90 100
130 140 150 160 170 180
pF1KE1 LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAI
:..::: : .:.:::.:..::: .:.::... :::. .:.::.::..:::: : .
NP_001 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 PVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRK
:...::.: ..:.. ::: .: ... : . .: : .: ::. :
NP_001 PIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFV---TTAEREIVRDI-------K
170 180 190 200 210
250 260 270 280 290 300
pF1KE1 EKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAE
::: : : ::. . ...:. :. ::.:.: .: :
NP_001 EKL-----------CY-VALDFENEMATAASSSSLEK--------SYELPDGQVITIGNE
220 230 240 250
310 320 330 340 350 360
pF1KE1 RLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSF
:.. :: ::.:: . : :. ... .:. :::::: ::.. ...::.:. ..
NP_001 RFRCPETLFQPSFI----GMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGI
260 270 280 290 300 310
370 380 390 400 410 420
pF1KE1 TDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGG
.::...:.. .: .:..:.:: ::..: ::::::::::.:::::::.::::.:.:
NP_001 ADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWITKQEYDEAG
320 330 340 350 360
pF1KE1 KQCVERKCP
. :.:::
NP_001 PSIVHRKCF
370
>>NP_001606 (OMIM: 102545) actin, gamma-enteric smooth m (376 aa)
initn: 861 init1: 355 opt: 363 Z-score: 452.0 bits: 92.5 E(85289): 2e-18
Smith-Waterman score: 836; 36.0% identity (63.1% similar) in 420 aa overlap (9-428:4-375)
10 20 30 40 50 60
pF1KE1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDK
.:. ::: : :: .::.::.: :.. ::. .: : .: .: :.:
NP_001 MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGR--PRHQG--VMVGMGQK
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 GKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV
. :. .: . : . :...:.. .::... : :.. ... ::.
NP_001 DS------YVGDEA-QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPT
60 70 80 90 100
130 140 150 160 170 180
pF1KE1 LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAI
:..::: : .:.:::.:..::: .:.::... :::. .:.::.::..:::: : .
NP_001 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 PVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRK
:...::.: ..:.. ::: .: ... : . .: : .: ::. :
NP_001 PIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFV---TTAEREIVRDI-------K
170 180 190 200 210
250 260 270 280 290 300
pF1KE1 EKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAE
::: : : ::. . ...:. :. ::.:.: .: :
NP_001 EKL-----------CY-VALDFENEMATAASSSSLEK--------SYELPDGQVITIGNE
220 230 240 250
310 320 330 340 350 360
pF1KE1 RLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSF
:.. :: ::.:: . : :. ... .:. :::::: ::.. ...::.:. ..
NP_001 RFRCPETLFQPSFI----GMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGI
260 270 280 290 300 310
370 380 390 400 410 420
pF1KE1 TDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGG
.::...:.. .: .:..:.:: ::..: ::::::::::.::::::::: ::.:.:
NP_001 ADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKPEYDEAG
320 330 340 350 360
pF1KE1 KQCVERKCP
. :.:::
NP_001 PSIVHRKCF
370
>>NP_001135417 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 869 init1: 355 opt: 363 Z-score: 451.9 bits: 92.5 E(85289): 2e-18
Smith-Waterman score: 838; 36.3% identity (63.2% similar) in 416 aa overlap (13-428:9-376)
10 20 30 40 50 60
pF1KE1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDK
::: : :: .::.::.: :.. ::. .: : .: .: :.:
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGR--PRHQG--VMVGMGQK
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 GKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV
. :. .: . : . :...:.. .::... : :.. ... ::.
NP_001 DS------YVGDEA-QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPT
60 70 80 90 100
130 140 150 160 170 180
pF1KE1 LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAI
:..::: : .:.:::.:..::: .:.::... :::. .:.::.::..:::: : .
NP_001 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 PVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRK
:...::.: ..:.. ::: .: ... : . .: : .: ::. :
NP_001 PIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTT---AEREIVRDI-------K
170 180 190 200 210
250 260 270 280 290 300
pF1KE1 EKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAE
::: : : ::. . ...:. :. ::.:.: .: :
NP_001 EKL-----------CY-VALDFENEMATAASSSSLEK--------SYELPDGQVITIGNE
220 230 240 250
310 320 330 340 350 360
pF1KE1 RLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSF
:.. :: ::.:: . : :. ... .:. :::::: ::.. ...::.:. ..
NP_001 RFRCPETLFQPSFI----GMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGI
260 270 280 290 300 310
370 380 390 400 410 420
pF1KE1 TDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGG
.::...:.. .: .:..:.:: ::..: ::::::::::.::::::::::::.:.:
NP_001 ADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG
320 330 340 350 360
pF1KE1 KQCVERKCP
. :.:::
NP_001 PSIVHRKCF
370
>>NP_001307784 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 869 init1: 355 opt: 363 Z-score: 451.9 bits: 92.5 E(85289): 2e-18
Smith-Waterman score: 838; 36.3% identity (63.2% similar) in 416 aa overlap (13-428:9-376)
10 20 30 40 50 60
pF1KE1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDK
::: : :: .::.::.: :.. ::. .: : .: .: :.:
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGR--PRHQG--VMVGMGQK
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 GKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV
. :. .: . : . :...:.. .::... : :.. ... ::.
NP_001 DS------YVGDEA-QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPT
60 70 80 90 100
130 140 150 160 170 180
pF1KE1 LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAI
:..::: : .:.:::.:..::: .:.::... :::. .:.::.::..:::: : .
NP_001 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 PVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRK
:...::.: ..:.. ::: .: ... : . .: : .: ::. :
NP_001 PIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTT---AEREIVRDI-------K
170 180 190 200 210
250 260 270 280 290 300
pF1KE1 EKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAE
::: : : ::. . ...:. :. ::.:.: .: :
NP_001 EKL-----------CY-VALDFENEMATAASSSSLEK--------SYELPDGQVITIGNE
220 230 240 250
310 320 330 340 350 360
pF1KE1 RLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSF
:.. :: ::.:: . : :. ... .:. :::::: ::.. ...::.:. ..
NP_001 RFRCPETLFQPSFI----GMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGI
260 270 280 290 300 310
370 380 390 400 410 420
pF1KE1 TDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGG
.::...:.. .: .:..:.:: ::..: ::::::::::.::::::::::::.:.:
NP_001 ADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG
320 330 340 350 360
pF1KE1 KQCVERKCP
. :.:::
NP_001 PSIVHRKCF
370
429 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 17:38:01 2016 done: Sun Nov 6 17:38:02 2016
Total Scan time: 8.490 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]