FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1841, 357 aa
  1>>>pF1KE1841 357 - 357 aa - 357 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7227+/-0.000999; mu= 14.3032+/- 0.060
 mean_var=66.9828+/-13.110, 0's: 0 Z-trim(104.2): 18  B-trim: 3 in 1/49
 Lambda= 0.156709
 statistics sampled from 7797 (7801) to 7797 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.24), width:  16
 Scan time:  2.570

The best scores are:                                      opt bits E(32554)
CCDS31219.1 ASCC1 gene_id:51008|Hs108|chr10        ( 357) 2379 546.9 9.9e-156
CCDS55713.1 ASCC1 gene_id:51008|Hs108|chr10        ( 400) 1639 379.6 2.5e-105


>>CCDS31219.1 ASCC1 gene_id:51008|Hs108|chr10             (357 aa)
 initn: 2379 init1: 2379 opt: 2379  Z-score: 2909.3  bits: 546.9 E(32554): 9.9e-156
Smith-Waterman score: 2379; 100.0% identity (100.0% similar) in 357 aa overlap (1-357:1-357)

               10        20        30        40        50        60
pF1KE1 MEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGSMECADEPCDAYEVEQTPQGFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGSMECADEPCDAYEVEQTPQGFR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 STLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 STLRAPSLLYKHIVGKRGDTRKKIEMETKTSISIPKPGQDGEIVITGQHRNGVISARTRI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLRFQEEVLAKCSMDHGVDSSIFQNPKKLHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLRFQEEVLAKCSMDHGVDSSIFQNPKKLHL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 TIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEMAGIEYMNDDPGMVDVLYAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEMAGIEYMNDDPGMVDVLYAK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 VHMKDGSNRLQELVDRVLERFQASGLIVKEWNSVKLHATVMNTLFRKDPNAEGRYNLYTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VHMKDGSNRLQELVDRVLERFQASGLIVKEWNSVKLHATVMNTLFRKDPNAEGRYNLYTA
              250       260       270       280       290       300

              310       320       330       340       350       
pF1KE1 EGKYIFKERESFDGRNILKLFENFYFGSLKLNSIHISQRFTVDSFGNYASCGQIDFS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EGKYIFKERESFDGRNILKLFENFYFGSLKLNSIHISQRFTVDSFGNYASCGQIDFS
              310       320       330       340       350       

>>CCDS55713.1 ASCC1 gene_id:51008|Hs108|chr10             (400 aa)
 initn: 2113 init1: 1639 opt: 1639  Z-score: 2004.4  bits: 379.6 E(32554): 2.5e-105
Smith-Waterman score: 2059; 91.4% identity (91.7% similar) in 349 aa overlap (1-321:1-349)

               10        20        30        40        50        60
pF1KE1 MEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGSMECADEPCDAYEVEQTPQGFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MEVLRPQLIRIDGRNYRKNPVQEQTYQHEEDEEDFYQGSMECADEPCDAYEVEQTPQGFR
               10        20        30        40        50        60

               70                                    80        90  
pF1KE1 STLRAPSLLY----------------------------KHIVGKRGDTRKKIEMETKTSI
       ::::::::::                            .:::::::::::::::::::::
CCDS55 STLRAPSLLYNLIHLNTSNDCGFQKITLDCQNIYTWKSRHIVGKRGDTRKKIEMETKTSI
               70        80        90       100       110       120

            100       110       120       130       140       150  
pF1KE1 SIPKPGQDGEIVITGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SIPKPGQDGEIVITGQHRNGVISARTRIDVLLDTFRRKQPFTHFLAFFLNEVEVQEGFLR
              130       140       150       160       170       180

            160       170       180       190       200       210  
pF1KE1 FQEEVLAKCSMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FQEEVLAKCSMDHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDIS
              190       200       210       220       230       240

            220       230       240       250       260       270  
pF1KE1 GGKPLEVEMAGIEYMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVKEWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GGKPLEVEMAGIEYMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVKEWN
              250       260       270       280       290       300

            280       290       300       310       320       330  
pF1KE1 SVKLHATVMNTLFRKDPNAEGRYNLYTAEGKYIFKERESFDGRNILKLFENFYFGSLKLN
       ::::::::::::::::::::::::::::::::::::::::::::::: :           
CCDS55 SVKLHATVMNTLFRKDPNAEGRYNLYTAEGKYIFKERESFDGRNILKSFALLPRLEYNDA
              310       320       330       340       350       360

            340       350                      
pF1KE1 SIHISQRFTVDSFGNYASCGQIDFS               
                                               
CCDS55 ISAHCNLCLPGSSDSPASASQVAGITGVSDAYSQSLPGKS
              370       380       390       400




357 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 12:37:31 2016 done: Sun Nov  6 12:37:31 2016
 Total Scan time:  2.570 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]