Result of FASTA (ccds) for
pFN21AE1820
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1820, 334 aa
1>>>pF1KE1820 334 - 334 aa - 334 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9355+/-0.000622; mu= 11.5745+/- 0.038
mean_var=147.4951+/-29.318, 0's: 0 Z-trim(117.6): 13 B-trim: 0 in 0/53
Lambda= 0.105605
statistics sampled from 18315 (18327) to 18315 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.841), E-opt: 0.2 (0.563), width: 16
Scan time: 3.510
The best scores are: opt bits E(32554)
CCDS12776.1 BCL2L12 gene_id:83596|Hs108|chr19 ( 334) 2341 367.2 1.1e-101
CCDS46144.1 BCL2L12 gene_id:83596|Hs108|chr19 ( 333) 2322 364.3 7.9e-101
CCDS74423.1 BCL2L12 gene_id:83596|Hs108|chr19 ( 269) 1615 256.5 1.8e-68
CCDS74424.1 BCL2L12 gene_id:83596|Hs108|chr19 ( 193) 1240 199.2 2.2e-51
>>CCDS12776.1 BCL2L12 gene_id:83596|Hs108|chr19 (334 aa)
initn: 2341 init1: 2341 opt: 2341 Z-score: 1939.3 bits: 367.2 E(32554): 1.1e-101
Smith-Waterman score: 2341; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334)
10 20 30 40 50 60
pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL
250 260 270 280 290 300
310 320 330
pF1KE1 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD
::::::::::::::::::::::::::::::::::
CCDS12 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD
310 320 330
>>CCDS46144.1 BCL2L12 gene_id:83596|Hs108|chr19 (333 aa)
initn: 1464 init1: 1464 opt: 2322 Z-score: 1923.7 bits: 364.3 E(32554): 7.9e-101
Smith-Waterman score: 2322; 99.7% identity (99.7% similar) in 334 aa overlap (1-334:1-333)
10 20 30 40 50 60
pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP-
70 80 90 100 110
130 140 150 160 170 180
pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL
240 250 260 270 280 290
310 320 330
pF1KE1 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD
::::::::::::::::::::::::::::::::::
CCDS46 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD
300 310 320 330
>>CCDS74423.1 BCL2L12 gene_id:83596|Hs108|chr19 (269 aa)
initn: 1664 init1: 1615 opt: 1615 Z-score: 1342.8 bits: 256.5 E(32554): 1.8e-68
Smith-Waterman score: 1615; 99.6% identity (100.0% similar) in 228 aa overlap (1-228:1-228)
10 20 30 40 50 60
pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR
:::::::::::::::::::::::::::::::::::::::::::::::.
CCDS74 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKVMGICPTPWQGQE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL
CCDS74 LRNGGHPGCFTRGLELAIGLSSFSEAATR
250 260
>>CCDS74424.1 BCL2L12 gene_id:83596|Hs108|chr19 (193 aa)
initn: 1240 init1: 1240 opt: 1240 Z-score: 1035.9 bits: 199.2 E(32554): 2.2e-51
Smith-Waterman score: 1240; 100.0% identity (100.0% similar) in 168 aa overlap (1-168:1-168)
10 20 30 40 50 60
pF1KE1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGGHPGCFTRGLEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR
CCDS74 AIGLSSFSEAATR
190
334 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:16:38 2016 done: Sun Nov 6 13:16:39 2016
Total Scan time: 3.510 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]