Result of FASTA (ccds) for
pFN21AE1752
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1752, 257 aa
1>>>pF1KE1752 257 - 257 aa - 257 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4303+/-0.000731; mu= 13.9453+/- 0.044
mean_var=67.9216+/-14.044, 0's: 0 Z-trim(109.4): 166 B-trim: 104 in 2/48
Lambda= 0.155622
statistics sampled from 10712 (10887) to 10712 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.334), width: 16
Scan time: 1.980
The best scores are: opt bits E(32554)
CCDS12031.1 GZMM gene_id:3004|Hs108|chr19 ( 257) 1724 395.6 1.8e-110
CCDS74240.1 GZMM gene_id:3004|Hs108|chr19 ( 218) 1475 339.7 1e-93
CCDS12046.1 CFD gene_id:1675|Hs108|chr19 ( 253) 644 153.1 1.7e-37
CCDS82261.1 CFD gene_id:1675|Hs108|chr19 ( 260) 632 150.4 1.1e-36
CCDS77203.1 PRSS57 gene_id:400668|Hs108|chr19 ( 282) 599 143.0 2.1e-34
CCDS12041.1 PRSS57 gene_id:400668|Hs108|chr19 ( 283) 599 143.0 2.1e-34
CCDS3964.1 GZMK gene_id:3003|Hs108|chr5 ( 264) 571 136.7 1.5e-32
CCDS12809.1 KLK4 gene_id:9622|Hs108|chr19 ( 254) 540 129.8 1.8e-30
CCDS58790.1 TMPRSS3 gene_id:64699|Hs108|chr21 ( 453) 541 130.1 2.6e-30
CCDS13686.1 TMPRSS3 gene_id:64699|Hs108|chr21 ( 454) 529 127.4 1.7e-29
CCDS9632.1 GZMH gene_id:2999|Hs108|chr14 ( 246) 505 121.9 4.2e-28
CCDS12819.1 KLK11 gene_id:11012|Hs108|chr19 ( 250) 504 121.7 4.9e-28
CCDS12818.1 KLK11 gene_id:11012|Hs108|chr19 ( 282) 504 121.7 5.4e-28
CCDS9633.1 GZMB gene_id:3002|Hs108|chr14 ( 247) 503 121.4 5.7e-28
CCDS3965.1 GZMA gene_id:3001|Hs108|chr5 ( 262) 501 121.0 8.2e-28
CCDS73391.1 TMPRSS5 gene_id:80975|Hs108|chr11 ( 413) 499 120.7 1.6e-27
CCDS9631.1 CTSG gene_id:1511|Hs108|chr14 ( 255) 496 119.9 1.7e-27
CCDS12805.1 KLK15 gene_id:55554|Hs108|chr19 ( 256) 496 119.9 1.7e-27
CCDS73392.1 TMPRSS5 gene_id:80975|Hs108|chr11 ( 448) 499 120.7 1.8e-27
CCDS44735.1 TMPRSS5 gene_id:80975|Hs108|chr11 ( 457) 499 120.7 1.8e-27
CCDS75122.1 CORIN gene_id:10699|Hs108|chr4 ( 938) 496 120.2 5.2e-27
CCDS3477.1 CORIN gene_id:10699|Hs108|chr4 (1042) 496 120.2 5.7e-27
CCDS62766.1 KLK15 gene_id:55554|Hs108|chr19 ( 255) 488 118.1 6e-27
CCDS12813.1 KLK8 gene_id:11202|Hs108|chr19 ( 260) 481 116.5 1.8e-26
CCDS12822.1 KLK13 gene_id:26085|Hs108|chr19 ( 277) 480 116.3 2.2e-26
CCDS8812.1 CELA1 gene_id:1990|Hs108|chr12 ( 258) 478 115.8 2.9e-26
CCDS157.1 CELA2A gene_id:63036|Hs108|chr1 ( 269) 478 115.9 3e-26
CCDS5279.1 PLG gene_id:5340|Hs108|chr6 ( 810) 480 116.6 5.6e-26
CCDS42600.1 KLK8 gene_id:11202|Hs108|chr19 ( 305) 472 114.5 8.5e-26
CCDS74856.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 802) 476 115.7 1e-25
CCDS13941.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 811) 476 115.7 1e-25
CCDS10852.1 CTRL gene_id:1506|Hs108|chr16 ( 264) 469 113.8 1.2e-25
CCDS33564.1 TMPRSS2 gene_id:7113|Hs108|chr21 ( 492) 468 113.7 2.4e-25
CCDS54486.1 TMPRSS2 gene_id:7113|Hs108|chr21 ( 529) 468 113.8 2.5e-25
CCDS12810.1 KLK5 gene_id:25818|Hs108|chr19 ( 293) 464 112.7 2.8e-25
CCDS30605.1 CELA2B gene_id:51032|Hs108|chr1 ( 269) 460 111.8 4.9e-25
CCDS3521.1 TMPRSS11B gene_id:132724|Hs108|chr4 ( 416) 460 111.9 7.1e-25
CCDS74669.1 PRSS56 gene_id:646960|Hs108|chr2 ( 603) 460 112.0 9.7e-25
CCDS12821.1 KLK12 gene_id:43849|Hs108|chr19 ( 248) 453 110.2 1.4e-24
CCDS76482.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 290) 452 110.0 1.8e-24
CCDS53717.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 397) 452 110.1 2.4e-24
CCDS44743.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 432) 452 110.1 2.6e-24
CCDS53716.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 435) 452 110.1 2.6e-24
CCDS31684.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 437) 452 110.1 2.6e-24
CCDS5872.1 PRSS1 gene_id:5644|Hs108|chr7 ( 247) 447 108.9 3.5e-24
CCDS12811.1 KLK6 gene_id:5653|Hs108|chr19 ( 244) 444 108.2 5.5e-24
CCDS3518.1 TMPRSS11D gene_id:9407|Hs108|chr4 ( 418) 445 108.5 7.4e-24
CCDS32489.1 CTRB2 gene_id:440387|Hs108|chr16 ( 263) 436 106.4 2e-23
CCDS10430.1 TPSG1 gene_id:25823|Hs108|chr16 ( 321) 437 106.7 2.1e-23
CCDS47958.1 PRSS3 gene_id:5646|Hs108|chr9 ( 304) 436 106.5 2.3e-23
>>CCDS12031.1 GZMM gene_id:3004|Hs108|chr19 (257 aa)
initn: 1724 init1: 1724 opt: 1724 Z-score: 2096.9 bits: 395.6 E(32554): 1.8e-110
Smith-Waterman score: 1724; 99.6% identity (99.6% similar) in 257 aa overlap (1-257:1-257)
10 20 30 40 50 60
pF1KE1 MEACVSSLLVLALGALSVGSSFGTQIIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MEACVSSLLVLALGALSVGSSFGTQIIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 VKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 VKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVAT
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS12 FWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVCGKGRVLARVLSFSSRVCTDIFKPPVAT
190 200 210 220 230 240
250
pF1KE1 AVAPYVSWIRKVTGRSA
:::::::::::::::::
CCDS12 AVAPYVSWIRKVTGRSA
250
>>CCDS74240.1 GZMM gene_id:3004|Hs108|chr19 (218 aa)
initn: 1475 init1: 1475 opt: 1475 Z-score: 1795.9 bits: 339.7 E(32554): 1e-93
Smith-Waterman score: 1475; 99.5% identity (99.5% similar) in 218 aa overlap (40-257:1-218)
10 20 30 40 50 60
pF1KE1 VLALGALSVGSSFGTQIIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLA
::::::::::::::::::::::::::::::
CCDS74 MASLQRNGSHLCGGVLVHPKWVLTAAHCLA
10 20 30
70 80 90 100 110 120
pF1KE1 QRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 QRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRP
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE1 LALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 LALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE1 MVCLAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWI
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS74 MVCLAADSKDQAPCKGDSGGPLVCGKGRVLARVLSFSSRVCTDIFKPPVATAVAPYVSWI
160 170 180 190 200 210
250
pF1KE1 RKVTGRSA
::::::::
CCDS74 RKVTGRSA
>>CCDS12046.1 CFD gene_id:1675|Hs108|chr19 (253 aa)
initn: 513 init1: 237 opt: 644 Z-score: 786.6 bits: 153.1 E(32554): 1.7e-37
Smith-Waterman score: 644; 42.4% identity (68.8% similar) in 250 aa overlap (7-252:8-251)
10 20 30 40 50
pF1KE1 MEACVSSLLVLALGALSVGSSFGTQIIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPK
..::: ::: . .. .:.::::. :.::::::.: ::.:::::::: .
CCDS12 MHSWERLAVLVL-LGAAACAAPPRGRILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQ
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 WVLTAAHCLAQRM-AQLRLVLGLHTLDSPGLT---FHIKAAIQHPRYKPVPALENDLALL
:::.::::: . ......:: :.:..: . . . :. :: .: ....:: ::
CCDS12 WVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQP-DTIDHDLLLL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 QLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRM
::. :. . ..::: . :: :: :..::::.....:: :... : :::
CCDS12 QLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRAT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 CNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVCTDIFK
:: .:... ..: .. .:. :::::::::::: :: ::.. .:::: . :
CCDS12 CNRRTHHDGAITERLMCAESNRRDS--CKGDSGGPLVCGG--VLEGVVTSGSRVCGNRKK
180 190 200 210 220 230
240 250
pF1KE1 PPVATAVAPYVSWIRKVTGRSA
: . : :: :..:: .:
CCDS12 PGIYTRVASYAAWIDSVLA
240 250
>>CCDS82261.1 CFD gene_id:1675|Hs108|chr19 (260 aa)
initn: 505 init1: 229 opt: 632 Z-score: 771.8 bits: 150.4 E(32554): 1.1e-36
Smith-Waterman score: 632; 43.5% identity (69.8% similar) in 232 aa overlap (25-252:32-258)
10 20 30 40 50
pF1KE1 MEACVSSLLVLALGALSVGSSFGTQIIGGREVIPHSRPYMASLQRNGSHLCGGV
.:.::::. :.::::::.: ::.::::::
CCDS82 HSWERLAVLVLLGAAACGEEAWAWAAPPRGRILGGREAEAHARPYMASVQLNGAHLCGGV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 LVHPKWVLTAAHCLAQRM-AQLRLVLGLHTLDSPGLT---FHIKAAIQHPRYKPVPALEN
:: .:::.::::: . ......:: :.:..: . . . :. :: .: ....
CCDS82 LVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQP-DTIDH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 DLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQV
:: ::::. :. . ..::: . :: :: :..::::.....:: :... : :
CCDS82 DLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 LDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVC
:: :: .:... ..: .. .:. :::::::::::: : :: ::.. .::::
CCDS82 LDRATCNRRTHHDGAITERLMCAESNRRDS--CKGDSGGPLVCG-G-VLEGVVTSGSRVC
190 200 210 220 230
240 250
pF1KE1 TDIFKPPVATAVAPYVSWIRKVTGRSA
. :: . : :: :..:: .:
CCDS82 GNRKKPGIYTRVASYAAWIDSVLA
240 250 260
>>CCDS77203.1 PRSS57 gene_id:400668|Hs108|chr19 (282 aa)
initn: 469 init1: 228 opt: 599 Z-score: 731.3 bits: 143.0 E(32554): 2.1e-34
Smith-Waterman score: 599; 43.2% identity (70.0% similar) in 243 aa overlap (21-257:28-265)
10 20 30 40 50
pF1KE1 MEACVSSLLVLALGALSVGSSFGTQIIGGREVIPHSRPYMASLQRNGSHLCGG
:.:.:::::.:: :::::::::.. .:.: :::
CCDS77 MGLGLRGWGRPLLTVATALMLPVKPPGSWGAQIIGGHEVTPHSRPYMASVRFGGQHHCGG
10 20 30 40 50 60
60 70 80 90 100
pF1KE1 VLVHPKWVLTAAHCLAQRMAQLRLV-LGLHTLDSPGLT---FHIKAAIQHPRYKPVPALE
:.. .::..::::...: . :: :: :.:.. : : : : :: :.:. .
CCDS77 FLLRARWVVSAAHCFSHRDLRTGLVVLGAHVLSTAEPTQQVFGIDALTTHPDYHPM-THA
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 NDLALLQLDGKVKPSRTIRPLALPSKR-QVVAAGTRCSMAGWGLTHQGGRLSRVLRELDL
::. ::.:.:.. . .. : :..: . .::::: .::::.. . .: : : .
CCDS77 NDICLLRLNGSAVLGPAVGLLRPPGRRARPPTAGTRCRVAGWGFVSDFEELPPGLMEAKV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 QVLDTRMCNNSRFWNGSLSPSMVCL-AADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSS
.::: .::.: :.: :. .:.: ..::. .. :..:::::::: ..:. :..:::.
CCDS77 RVLDPDVCNSS--WKGHLTLTMLCTRSGDSHRRGFCSADSGGPLVC-RNRA-HGLVSFSG
180 190 200 210 220 230
230 240 250
pF1KE1 RVCTDIFKPPVATAVAPYVSWIRKVTGRSA
: : : : : :. .:.:: :. ::.
CCDS77 LWCGDPKTPDVYTQVSAFVAWIWDVVRRSSPQPGPLPGTTRPPGEAA
240 250 260 270 280
>>CCDS12041.1 PRSS57 gene_id:400668|Hs108|chr19 (283 aa)
initn: 469 init1: 228 opt: 599 Z-score: 731.2 bits: 143.0 E(32554): 2.1e-34
Smith-Waterman score: 599; 43.2% identity (70.0% similar) in 243 aa overlap (21-257:29-266)
10 20 30 40 50
pF1KE1 MEACVSSLLVLALGALSVGSSFGTQIIGGREVIPHSRPYMASLQRNGSHLCG
:.:.:::::.:: :::::::::.. .:.: ::
CCDS12 MGLGLRGWGRPLLTVATALMLPVKPPAGSWGAQIIGGHEVTPHSRPYMASVRFGGQHHCG
10 20 30 40 50 60
60 70 80 90 100
pF1KE1 GVLVHPKWVLTAAHCLAQRMAQLRLV-LGLHTLDSPGLT---FHIKAAIQHPRYKPVPAL
: :.. .::..::::...: . :: :: :.:.. : : : : :: :.:. .
CCDS12 GFLLRARWVVSAAHCFSHRDLRTGLVVLGAHVLSTAEPTQQVFGIDALTTHPDYHPM-TH
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 ENDLALLQLDGKVKPSRTIRPLALPSKR-QVVAAGTRCSMAGWGLTHQGGRLSRVLRELD
::. ::.:.:.. . .. : :..: . .::::: .::::.. . .: : :
CCDS12 ANDICLLRLNGSAVLGPAVGLLRPPGRRARPPTAGTRCRVAGWGFVSDFEELPPGLMEAK
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 LQVLDTRMCNNSRFWNGSLSPSMVCL-AADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFS
..::: .::.: :.: :. .:.: ..::. .. :..:::::::: ..:. :..:::
CCDS12 VRVLDPDVCNSS--WKGHLTLTMLCTRSGDSHRRGFCSADSGGPLVC-RNRA-HGLVSFS
180 190 200 210 220 230
230 240 250
pF1KE1 SRVCTDIFKPPVATAVAPYVSWIRKVTGRSA
. : : : : : :. .:.:: :. ::.
CCDS12 GLWCGDPKTPDVYTQVSAFVAWIWDVVRRSSPQPGPLPGTTRPPGEAA
240 250 260 270 280
>>CCDS3964.1 GZMK gene_id:3003|Hs108|chr5 (264 aa)
initn: 446 init1: 272 opt: 571 Z-score: 697.7 bits: 136.7 E(32554): 1.5e-32
Smith-Waterman score: 571; 40.2% identity (66.9% similar) in 254 aa overlap (7-250:8-255)
10 20 30 40 50
pF1KE1 MEACVSSLLVLALGALSVGSSFGTQIIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPK
::. : .:: . :. .::::.:: :::::.:::.: .: :.:::::. :.
CCDS39 MTKFSSFSLFFLIVGAYMTHVCFNMEIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 WVLTAAHCLAQ--RMAQLRLVLGLHTL---DSPGLTFHIKAAIQHPRYKPVPALENDLAL
:::::::: . . . .::: :.: .. :..:: : : : ::. :
CCDS39 WVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQ-SNDIML
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 LQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGG-RLSRVLRELDLQVLDT
..:. .: .. .. : . :: .. .::.:...::: : . : : .:::. . ::.
CCDS39 VKLQTAAKLNKHVKMLHIRSKTSL-RSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 RMCNNSRFWNGS--LSPSMVCLAADSKDQAP-CKGDSGGPLVCGKGRVLAGVLSFSSRVC
..::.. ..::. .. .::: :.:.: : :::::::::.: :: :. ...: ... :
CCDS39 KLCNSQSYYNGDPFITKDMVC-AGDAKGQKDSCKGDSGGPLIC-KG-VFHAIVS-GGHEC
180 190 200 210 220 230
240 250
pF1KE1 TDIFKPPVATAVAP-YVSWIRKVTGRSA
:: . : .. : .::.
CCDS39 GVATKPGIYTLLTKKYQTWIKSNLVPPHTN
240 250 260
>>CCDS12809.1 KLK4 gene_id:9622|Hs108|chr19 (254 aa)
initn: 417 init1: 235 opt: 540 Z-score: 660.4 bits: 129.8 E(32554): 1.8e-30
Smith-Waterman score: 540; 38.8% identity (69.4% similar) in 255 aa overlap (9-256:15-254)
10 20 30 40 50
pF1KE1 MEACVSSLLVLAL-GALSVGSSFGTQIIGGREVIPHSRPYMASLQRNGSHLCGG
:.:.. :.: :: .:::.:.. :::.:..:.: .. .:.:
CCDS12 MATAGNPWGWFLGYLILGVAGSLVSGSC--SQIINGEDCSPHSQPWQAALVMENELFCSG
10 20 30 40 50
60 70 80 90 100
pF1KE1 VLVHPKWVLTAAHCLAQRMAQLRLVLGLHTLDS---PGLTFHIKAA--IQHPRYKPVPAL
:::::.:::.::::. . .. . ::::.:.. :: . ..:. ..::.:. : :
CCDS12 VLVHPQWVLSAAHCFQNSYT---IGLGLHSLEADQEPG-SQMVEASLSVRHPEYNR-PLL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 ENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDL
::: :..:: .:. : ::: ... : : .::. : ..:::: .::. ::. ...
CCDS12 ANDLMLIKLDESVSESDTIRSISIAS--QCPTAGNSCLVSGWGLL-ANGRMPTVLQCVNV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 QVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAP-CKGDSGGPLVCGKGRVLAGVLSFSS
.:.. ..: :.... ::: : :. ..:: :.:::::::.:. : : :..::..
CCDS12 SVVSEEVC--SKLYDPLYHPSMFC-AGGGQDQKDSCNGDSGGPLICN-GY-LQGLVSFGK
180 190 200 210 220
230 240 250
pF1KE1 RVCTDIFKPPVATAVAPYVSWIRKVTGRSA
: .. : : : . .. ::.:.. :
CCDS12 APCGQVGVPGVYTNLCKFTEWIEKTVQAS
230 240 250
>>CCDS58790.1 TMPRSS3 gene_id:64699|Hs108|chr21 (453 aa)
initn: 502 init1: 280 opt: 541 Z-score: 657.8 bits: 130.1 E(32554): 2.6e-30
Smith-Waterman score: 541; 34.8% identity (65.6% similar) in 256 aa overlap (2-251:192-445)
10 20 30
pF1KE1 MEACVSSLLV-LALGALSVGSSFGTQIIGGR
:.:.:. .: : : . .....:.::
CCDS58 EGQFREEFVSIDHLLPDDKVTALHHSVYVREGCASGHVVTLQCTACGHRRGYSSRIVGGN
170 180 190 200 210 220
40 50 60 70 80
pF1KE1 EVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRM--AQLRLVLGLHTL-DSP
. . :..:::: .: ::::: .. : :..:::::. . . . . .:: .: :.:
CCDS58 MSLLSQWPWQASLQFQGYHLCGGSVITPLWIITAAHCVYDLYLPKSWTIQVGLVSLLDNP
230 240 250 260 270 280
90 100 110 120 130 140
pF1KE1 GLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSM
. . .. . : .::: : ::.::..: : . .. :.:. ::.... : :
CCDS58 APSHLVEKIVYHSKYKP-KRLGNDIALMKLAGPLTFNEMIQPVCLPNSEENFPDGKVCWT
290 300 310 320 330 340
150 160 170 180 190 200
pF1KE1 AGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDS
.::: :..:: : :: . . ......::. ..: .::::.: . . :.:::
CCDS58 SGWGATEDGGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLTGGVDSCQGDS
350 360 370 380 390 400
210 220 230 240 250
pF1KE1 GGPLVCGKGRV--LAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGRSA
:::::: . :. :.:. ::. :... :: : : :. ...::..
CCDS58 GGPLVCQERRLWKLVGATSFGIG-CAEVNKPGVYTRVTSFLDWIHEQMERDLKT
410 420 430 440 450
>>CCDS13686.1 TMPRSS3 gene_id:64699|Hs108|chr21 (454 aa)
initn: 462 init1: 160 opt: 529 Z-score: 643.2 bits: 127.4 E(32554): 1.7e-29
Smith-Waterman score: 529; 34.6% identity (65.4% similar) in 257 aa overlap (2-251:192-446)
10 20 30
pF1KE1 MEACVSSLLV-LALGALSVGSSFGTQIIGGR
:.:.:. .: : : . .....:.::
CCDS13 EGQFREEFVSIDHLLPDDKVTALHHSVYVREGCASGHVVTLQCTACGHRRGYSSRIVGGN
170 180 190 200 210 220
40 50 60 70 80
pF1KE1 EVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRM--AQLRLVLGLHTL-DSP
. . :..:::: .: ::::: .. : :..:::::. . . . . .:: .: :.:
CCDS13 MSLLSQWPWQASLQFQGYHLCGGSVITPLWIITAAHCVYDLYLPKSWTIQVGLVSLLDNP
230 240 250 260 270 280
90 100 110 120 130 140
pF1KE1 GLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSM
. . .. . : .::: : ::.::..: : . .. :.:. ::.... : :
CCDS13 APSHLVEKIVYHSKYKP-KRLGNDIALMKLAGPLTFNEMIQPVCLPNSEENFPDGKVCWT
290 300 310 320 330 340
150 160 170 180 190 200
pF1KE1 AGWGLTHQG-GRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGD
.::: :..: : : :: . . ......::. ..: .::::.: . . :.::
CCDS13 SGWGATEDGAGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLTGGVDSCQGD
350 360 370 380 390 400
210 220 230 240 250
pF1KE1 SGGPLVCGKGRV--LAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGRSA
::::::: . :. :.:. ::. :... :: : : :. ...::..
CCDS13 SGGPLVCQERRLWKLVGATSFGIG-CAEVNKPGVYTRVTSFLDWIHEQMERDLKT
410 420 430 440 450
257 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:37:52 2016 done: Sun Nov 6 13:37:52 2016
Total Scan time: 1.980 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]