Result of FASTA (ccds) for
pFN21AE1749
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1749, 252 aa
1>>>pF1KE1749 252 - 252 aa - 252 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7268+/-0.000661; mu= 13.0249+/- 0.040
mean_var=82.0657+/-16.331, 0's: 0 Z-trim(111.5): 85 B-trim: 0 in 0/53
Lambda= 0.141577
statistics sampled from 12327 (12417) to 12327 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.752), E-opt: 0.2 (0.381), width: 16
Scan time: 1.960
The best scores are: opt bits E(32554)
CCDS1476.1 C4BPB gene_id:725|Hs108|chr1 ( 252) 1796 375.9 1.5e-104
CCDS31005.1 C4BPB gene_id:725|Hs108|chr1 ( 251) 1779 372.4 1.6e-103
CCDS55189.1 CSMD1 gene_id:64478|Hs108|chr8 (3564) 455 102.7 3.5e-21
CCDS6316.2 CSMD3 gene_id:114788|Hs108|chr8 (3538) 375 86.4 2.9e-16
CCDS6317.1 CSMD3 gene_id:114788|Hs108|chr8 (3667) 375 86.4 3e-16
CCDS6315.1 CSMD3 gene_id:114788|Hs108|chr8 (3707) 375 86.4 3e-16
CCDS380.1 CSMD2 gene_id:114784|Hs108|chr1 (3487) 371 85.5 5.1e-16
CCDS48004.1 SVEP1 gene_id:79987|Hs108|chr9 (3571) 344 80.0 2.4e-14
CCDS60082.1 CSMD2 gene_id:114784|Hs108|chr1 (3631) 305 72.1 6e-12
CCDS4729.1 CFB gene_id:629|Hs108|chr6 ( 764) 292 69.0 1.1e-11
CCDS31007.1 CR2 gene_id:1380|Hs108|chr1 (1092) 280 66.6 7.8e-11
>>CCDS1476.1 C4BPB gene_id:725|Hs108|chr1 (252 aa)
initn: 1796 init1: 1796 opt: 1796 Z-score: 1990.7 bits: 375.9 E(32554): 1.5e-104
Smith-Waterman score: 1796; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KE1 MFFWCACCLMVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKGYHLVGKKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MFFWCACCLMVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKGYHLVGKKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LFCNASKEWDNTTTECRLGHCPDPVLVNGEFSSSGPVNVSDKITFMCNDHYILKGSNRSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LFCNASKEWDNTTTECRLGHCPDPVLVNGEFSSSGPVNVSDKITFMCNDHYILKGSNRSQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 CLEDHTWAPPFPICKSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLVGVQEQQCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 CLEDHTWAPPFPICKSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLVGVQEQQCV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 DGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKESGMTMEELKYSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKESGMTMEELKYSL
190 200 210 220 230 240
250
pF1KE1 ELKKAELKAKLL
::::::::::::
CCDS14 ELKKAELKAKLL
250
>>CCDS31005.1 C4BPB gene_id:725|Hs108|chr1 (251 aa)
initn: 1777 init1: 1637 opt: 1779 Z-score: 1972.0 bits: 372.4 E(32554): 1.6e-103
Smith-Waterman score: 1779; 99.6% identity (99.6% similar) in 252 aa overlap (1-252:1-251)
10 20 30 40 50 60
pF1KE1 MFFWCACCLMVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKGYHLVGKKT
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS31 MFFWCACCLMVAWRVSASD-EHCPELPPVDNSIFVAKEVEGQILGTYVCIKGYHLVGKKT
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 LFCNASKEWDNTTTECRLGHCPDPVLVNGEFSSSGPVNVSDKITFMCNDHYILKGSNRSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LFCNASKEWDNTTTECRLGHCPDPVLVNGEFSSSGPVNVSDKITFMCNDHYILKGSNRSQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 CLEDHTWAPPFPICKSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLVGVQEQQCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CLEDHTWAPPFPICKSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLVGVQEQQCV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 DGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKESGMTMEELKYSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKESGMTMEELKYSL
180 190 200 210 220 230
250
pF1KE1 ELKKAELKAKLL
::::::::::::
CCDS31 ELKKAELKAKLL
240 250
>>CCDS55189.1 CSMD1 gene_id:64478|Hs108|chr8 (3564 aa)
initn: 417 init1: 351 opt: 455 Z-score: 493.7 bits: 102.7 E(32554): 3.5e-21
Smith-Waterman score: 455; 35.3% identity (64.7% similar) in 204 aa overlap (26-226:2627-2824)
10 20 30 40 50
pF1KE1 MFFWCACCLMVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKGYHL
.:: :.: . : : . ..: :: :
CCDS55 WRLLRCQANGTWNIGDERPSCRVISCGSLSFPPNGNKIGTLT-VYGAT-AIFTCNTGYTL
2600 2610 2620 2630 2640 2650
60 70 80 90 100 110
pF1KE1 VGKKTLFCNASKEWDNTTTECRLGHC--PDPVLVNGEFSSSGPVNVSDKITFMCNDHYIL
::... : :. :... :.: ::: :::. :::..:..: . : ....:: . :
CCDS55 VGSHVRECLANGLWSGSETRCLAGHCGSPDPI-VNGHISGDG-FSYRDTVVYQCNPGFRL
2660 2670 2680 2690 2700 2710
120 130 140 150 160 170
pF1KE1 KGSNRSQCLEDHTWAPPFPICKSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLVG
:.. ::.:: :. :.: : ::::.::. .:..:.:...... :. : : :
CCDS55 VGTSVRICLQDHKWSGQTPVCVPITCGHPGNPAHGFTNGSEFNLNDVVNFTCNTGYLLQG
2720 2730 2740 2750 2760 2770
180 190 200 210 220 230
pF1KE1 VQEQQC-VDGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKESGMT
:.. :: .:.::: ::.:.... . :.:. :. :. :..: :. :
CCDS55 VSRAQCRSNGQWSSPLPTCRVVNCSDPGFVENAIRHGQQ--NFPESFEYGMSILYHCKKG
2780 2790 2800 2810 2820 2830
240 250
pF1KE1 MEELKYSLELKKAELKAKLL
CCDS55 FYLLGSSALTCMANGLWDRSLPKCLAISCGHPGVPANAVLTGELFTYGAVVHYSCRGSES
2840 2850 2860 2870 2880 2890
>>CCDS6316.2 CSMD3 gene_id:114788|Hs108|chr8 (3538 aa)
initn: 516 init1: 327 opt: 375 Z-score: 405.4 bits: 86.4 E(32554): 2.9e-16
Smith-Waterman score: 375; 29.9% identity (60.9% similar) in 174 aa overlap (23-194:2590-2762)
10 20 30 40 50
pF1KE1 MFFWCACCLMVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKG
: ::: :. .. .. . ..: :
CCDS63 LSSKELTTAVCQSDGTWSNHNKTPRCVVISCGELPTPPNGNKIGTQTSYGSTAIFTCDLG
2560 2570 2580 2590 2600 2610
60 70 80 90 100 110
pF1KE1 YHLVGKKTLFCNASKEWDNTTTECRLGHCPDP-VLVNGEFSSSGPVNVSDKITFMCNDHY
. :::. . : .: :... :.: ::: : ..:::. . . . : ....:: .
CCDS63 FMLVGSAVRECLSSGLWSESETRCLAGHCGIPELIVNGQVIGEN-YGYRDTVVYQCNPGF
2620 2630 2640 2650 2660 2670
120 130 140 150 160 170
pF1KE1 ILKGSNRSQCLEDHTWAPPFPICKSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYL
: ::. : .::.:. .: : .: ::.:..: ::.:........ :. : .
CCDS63 RLIGSSVRICQQDHNWSGQLPSCVPVSCGHPGSPIYGRTSGNGFNFNDVVTFSCNIGYLM
2680 2690 2700 2710 2720 2730
180 190 200 210 220 230
pF1KE1 VGVQEQQC-VDGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKESG
: . :: .. .:: :.::..
CCDS63 QGPTKAQCQANRQWSHPPPMCKVVNCSDPGIPANSKRESKIEHGNFTYGTVVFYDCNPGY
2740 2750 2760 2770 2780 2790
>>CCDS6317.1 CSMD3 gene_id:114788|Hs108|chr8 (3667 aa)
initn: 516 init1: 327 opt: 375 Z-score: 405.2 bits: 86.4 E(32554): 3e-16
Smith-Waterman score: 375; 29.9% identity (60.9% similar) in 174 aa overlap (23-194:2719-2891)
10 20 30 40 50
pF1KE1 MFFWCACCLMVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKG
: ::: :. .. .. . ..: :
CCDS63 YHGLGPASIECLPNGTWSWRNERPYCQIISCGELPTPPNGNKIGTQTSYGSTAIFTCDLG
2690 2700 2710 2720 2730 2740
60 70 80 90 100 110
pF1KE1 YHLVGKKTLFCNASKEWDNTTTECRLGHCPDP-VLVNGEFSSSGPVNVSDKITFMCNDHY
. :::. . : .: :... :.: ::: : ..:::. . . . : ....:: .
CCDS63 FMLVGSAVRECLSSGLWSESETRCLAGHCGIPELIVNGQVIGEN-YGYRDTVVYQCNPGF
2750 2760 2770 2780 2790 2800
120 130 140 150 160 170
pF1KE1 ILKGSNRSQCLEDHTWAPPFPICKSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYL
: ::. : .::.:. .: : .: ::.:..: ::.:........ :. : .
CCDS63 RLIGSSVRICQQDHNWSGQLPSCVPVSCGHPGSPIYGRTSGNGFNFNDVVTFSCNIGYLM
2810 2820 2830 2840 2850 2860
180 190 200 210 220 230
pF1KE1 VGVQEQQC-VDGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKESG
: . :: .. .:: :.::..
CCDS63 QGPTKAQCQANRQWSHPPPMCKVVNCSDPGIPANSKRESKIEHGNFTYGTVVFYDCNPGY
2870 2880 2890 2900 2910 2920
>>CCDS6315.1 CSMD3 gene_id:114788|Hs108|chr8 (3707 aa)
initn: 516 init1: 327 opt: 375 Z-score: 405.1 bits: 86.4 E(32554): 3e-16
Smith-Waterman score: 375; 29.9% identity (60.9% similar) in 174 aa overlap (23-194:2759-2931)
10 20 30 40 50
pF1KE1 MFFWCACCLMVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKG
: ::: :. .. .. . ..: :
CCDS63 YHGLGPASIECLPNGTWSWRNERPYCQIISCGELPTPPNGNKIGTQTSYGSTAIFTCDLG
2730 2740 2750 2760 2770 2780
60 70 80 90 100 110
pF1KE1 YHLVGKKTLFCNASKEWDNTTTECRLGHCPDP-VLVNGEFSSSGPVNVSDKITFMCNDHY
. :::. . : .: :... :.: ::: : ..:::. . . . : ....:: .
CCDS63 FMLVGSAVRECLSSGLWSESETRCLAGHCGIPELIVNGQVIGEN-YGYRDTVVYQCNPGF
2790 2800 2810 2820 2830 2840
120 130 140 150 160 170
pF1KE1 ILKGSNRSQCLEDHTWAPPFPICKSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYL
: ::. : .::.:. .: : .: ::.:..: ::.:........ :. : .
CCDS63 RLIGSSVRICQQDHNWSGQLPSCVPVSCGHPGSPIYGRTSGNGFNFNDVVTFSCNIGYLM
2850 2860 2870 2880 2890 2900
180 190 200 210 220 230
pF1KE1 VGVQEQQC-VDGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKESG
: . :: .. .:: :.::..
CCDS63 QGPTKAQCQANRQWSHPPPMCKVVNCSDPGIPANSKRESKIEHGNFTYGTVVFYDCNPGY
2910 2920 2930 2940 2950 2960
>>CCDS380.1 CSMD2 gene_id:114784|Hs108|chr1 (3487 aa)
initn: 546 init1: 295 opt: 371 Z-score: 401.1 bits: 85.5 E(32554): 5.1e-16
Smith-Waterman score: 371; 31.8% identity (63.0% similar) in 173 aa overlap (23-191:2658-2827)
10 20 30 40 50
pF1KE1 MFFWCACCLMVAWRVSASDAEHCPELP-PVDNSIFVAKEVEGQILGTYVCIK
: ::: : .. . . : : . . : .
CCDS38 YYYTGQRVIRCQANGKWSLGDSTPTCRIISCGELPIPPNGHRIGTLSVYGAT-AIFSCNS
2630 2640 2650 2660 2670 2680
60 70 80 90 100
pF1KE1 GYHLVGKKTLFCNASKEWDNTTTECRLGHC--PDPVLVNGEFSSSGPVNVSDKITFMCND
:: :::... : :. :... ..: ::: :.:. :::.... . . .....::
CCDS38 GYTLVGSRVRECMANGLWSGSEVRCLAGHCGTPEPI-VNGHINGEN-YSYRGSVVYQCNA
2690 2700 2710 2720 2730 2740
110 120 130 140 150 160
pF1KE1 HYILKGSNRSQCLEDHTWAPPFPICKSRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRY
. : : . : .:: :. :.: .: ::.: :. . :...:.:... : : .
CCDS38 GFRLIGMSVRICQQDHHWSGKTPFCVLVSCGHPGSPPHSQMSGDSYTVGAVVRYSCIGKR
2750 2760 2770 2780 2790 2800
170 180 190 200 210 220
pF1KE1 YLVGVQEQQC-VDGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKE
::: . ..: .::.:...:: :
CCDS38 TLVGNSTRMCGLDGHWTGSLPHCSGTSVGVCGDPGIPAHGIRLGDSFDPGTVMRFSCEAG
2810 2820 2830 2840 2850 2860
>>CCDS48004.1 SVEP1 gene_id:79987|Hs108|chr9 (3571 aa)
initn: 692 init1: 321 opt: 344 Z-score: 371.2 bits: 80.0 E(32554): 2.4e-14
Smith-Waterman score: 346; 29.7% identity (60.5% similar) in 172 aa overlap (23-191:2264-2435)
10 20 30 40 50
pF1KE1 MFFWCACCLMVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKG
: . ::..:... ... : . : .:
CCDS48 GYKSVGSPVFVCQANRHWHSESPLMCVPLDCGKPPPIQNGFMKGENFEVGSKVQFFCNEG
2240 2250 2260 2270 2280 2290
60 70 80 90 100 110
pF1KE1 YHLVGKKTLFCNASKEWDNTTT-ECRLGHCPDPVLVNGEFSSSGPVNVSDKITFMCNDHY
:.::: .. :. : .:.. .. .: ..::.: :..... . .. .:: :.. .
CCDS48 YELVGDSSWTCQKSGKWNKKSNPKCMPAKCPEPPLLENQLVLKELTTEVGVVTFSCKEGH
2300 2310 2320 2330 2340 2350
120 130 140 150 160 170
pF1KE1 ILKGSNRSQCLEDHTWAPPFPICKSRDCDPPGNPVHGY-FEGNNFTLGSTISYYCEDRYY
.:.: . .:: .. : ::.:: : :: : . .. . .:::..: : ..
CCDS48 VLQGPSVLKCLPSQQWNDSFPVCKIVLCTPPPLISFGVPIPSSALHFGSTVKYSCVGGFF
2360 2370 2380 2390 2400 2410
180 190 200 210 220
pF1KE1 LVGVQEQQCV-DGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKES
: : . : :: ::: :: :
CCDS48 LRGNSTTLCQPDGTWSSPLPECVPVECPQPEEIPNGIIDVQGLAYLSTALYTCKPGFELV
2420 2430 2440 2450 2460 2470
>--
initn: 692 init1: 321 opt: 344 Z-score: 371.2 bits: 80.0 E(32554): 2.4e-14
Smith-Waterman score: 344; 26.8% identity (56.9% similar) in 209 aa overlap (23-224:2440-2642)
10 20 30 40 50
pF1KE1 MFFWCACCLMVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKG
::. . :.:. .. . . :.: :
CCDS48 GGFFLRGNSTTLCQPDGTWSSPLPECVPVECPQPEEIPNGIIDVQGLAYLSTALYTCKPG
2410 2420 2430 2440 2450 2460
60 70 80 90 100 110
pF1KE1 YHLVGKKTLFCNASKEWDNTTTECRLGHCPDPV-LVNGEFSSSGPVNVSDKITFMCNDHY
..:::. : .:. . .: . :. .: : ..::.:: . .. .. .:. :: .
CCDS48 FELVGNTTTLCGENGHWLGGKPTCKAIECLKPKEILNGKFSYTD-LHYGQTVTYSCNRGF
2470 2480 2490 2500 2510 2520
120 130 140 150 160 170
pF1KE1 ILKGSNRSQCLEDHTWAPPFPICKSRDCDPPGNPV-HGYFEGNNFTLGSTISYYCEDRYY
:.: . ::: : : :.. :: : .:. .:. :: ... :. : : : .
CCDS48 RLEGPSALTCLETGDWDVDAPSCNAIHCDSP-QPIENGFVEGADYSYGAIIIYSCFPGFQ
2530 2540 2550 2560 2570 2580
180 190 200 210 220
pF1KE1 LVGVQEQQCVDGEWSSALPVCKLIQEAPKP-----ECEKALLAFQESKNLCEAMENFMQQ
..: : : .. :::..:.: :. . : .: : ...... : ...:.
CCDS48 VAGHAMQTCEESGWSSSIPTCMPIDCGLPPHIDFGDCTK----LKDDQGYFEQEDDMMEV
2590 2600 2610 2620 2630 2640
230 240 250
pF1KE1 LKESGMTMEELKYSLELKKAELKAKLL
CCDS48 PYVTPHPPYHLGAVAKTWENTKESPATHSSNFLYGTMVSYTCNPGYELLGNPVLICQEDG
2650 2660 2670 2680 2690 2700
>--
initn: 654 init1: 249 opt: 317 Z-score: 341.3 bits: 74.5 E(32554): 1.1e-12
Smith-Waterman score: 317; 29.4% identity (57.1% similar) in 163 aa overlap (46-207:1812-1974)
20 30 40 50 60 70
pF1KE1 SASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKGYHLVGKKTLFCNASKEWDNTTTE
:. : .::.:.: . : : ::..
CCDS48 NCAEPIKCKAPGNPENGHSSGEIYTVGAEVTFSCQEGYQLMGVTKITCLESGEWNHLIPY
1790 1800 1810 1820 1830 1840
80 90 100 110 120 130
pF1KE1 CRLGHCPDPVLVNGEFSSSGPVNVSDKITFMCNDHYILKGSNRSQCLEDHTWAPPFPICK
:. : :.. .. . ..:.:. :: : : :...:.:: . .:. :.:.
CCDS48 CKAVSCGKPAIPENGCIEELAFTFGSKVTYRCNKGYTLAGDKESSCLANSSWSHSPPVCE
1850 1860 1870 1880 1890 1900
140 150 160 170 180 190
pF1KE1 SRDCDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLVGVQEQQCV-DGEWSSALPVCKLI
:. : : .: . ...: :: :: :. : : : . .:. .: :. : :.:.:.
CCDS48 PVKCSSPENINNGKYILSGLTYLSTASYSCDTGYSLQGPSIIECTASGIWDRAPPACHLV
1910 1920 1930 1940 1950 1960
200 210 220 230 240 250
pF1KE1 QEAPKPECEKALLAFQESKNLCEAMENFMQQLKESGMTMEELKYSLELKKAELKAKLL
. : . :..
CCDS48 FCGEPPAIKDAVITGNNFTFRNTVTYTCKEGYTLAGLDTIECLADGKWSRSDQQCLAVSC
1970 1980 1990 2000 2010 2020
>>CCDS60082.1 CSMD2 gene_id:114784|Hs108|chr1 (3631 aa)
initn: 482 init1: 231 opt: 305 Z-score: 328.0 bits: 72.1 E(32554): 6e-12
Smith-Waterman score: 346; 30.3% identity (58.5% similar) in 188 aa overlap (16-194:2732-2916)
10 20 30 40
pF1KE1 MFFWCACCLMVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILG
: . : :: :. :. . ... .
CCDS60 WSGSEVRCLATQTKLHSIFYKLLFDVLSSPSLTKAGHCGTPEPIVNGHINGENYSYRGSV
2710 2720 2730 2740 2750 2760
50 60 70 80 90 100
pF1KE1 TYVCIKGYHLVGKKTLFCNASKEWDNTTTEC---RLGHCPDPVLVNGEFSSSGPVNVSDK
.: : :..:.: .. .:. ...:.. : : :: .: ::: ..... :..:
CCDS60 VYQCNAGFRLIGMSVRICQQDHHWSGKTPFCVPITCGHPGNP--VNG-LTQGNQFNLNDV
2770 2780 2790 2800 2810
110 120 130 140 150
pF1KE1 ITFMCNDHYILKGSNRSQCLEDHTWAPPFPICKSRDCDPPG---NPVHGYFEG--NNFTL
. :.:: :. .:. ::::: . :. .: :. .: :: : :. . . :..
CCDS60 VKFVCNPGYMAEGAARSQCLASGQWSDMLPTCRIINCTDPGHQENSVRQVHASGPHRFSF
2820 2830 2840 2850 2860 2870
160 170 180 190 200 210
pF1KE1 GSTISYYCEDRYYLVGVQEQQCV-DGEWSSALPVCKLIQEAPKPECEKALLAFQESKNLC
:.:.:: :. .::.:. .: :: :. : : :.
CCDS60 GTTVSYRCNHGFYLLGTPVLSCQGDGTWDRPRPQCLLVSCGHPGSPPHSQMSGDSYTVGA
2880 2890 2900 2910 2920 2930
220 230 240 250
pF1KE1 EAMENFMQQLKESGMTMEELKYSLELKKAELKAKLL
CCDS60 VVRYSCIGKRTLVGNSTRMCGLDGHWTGSLPHCSGTSVGVCGDPGIPAHGIRLGDSFDPG
2940 2950 2960 2970 2980 2990
>>CCDS4729.1 CFB gene_id:629|Hs108|chr6 (764 aa)
initn: 186 init1: 116 opt: 292 Z-score: 323.5 bits: 69.0 E(32554): 1.1e-11
Smith-Waterman score: 335; 31.7% identity (53.4% similar) in 189 aa overlap (40-212:54-241)
10 20 30 40 50 60
pF1KE1 MVAWRVSASDAEHCPELPPVDNSIFVAKEVEGQILGTYVCIKGYHLVGKKTLFCNASKEW
::: : ::: .:.. .: : .. :
CCDS47 TTTPWSLARPQGSCSLEGVEIKGGSFRLLQEGQAL-EYVCPSGFYPYPVQTRTCRSTGSW
30 40 50 60 70 80
70 80 90 100 110
pF1KE1 DNTTT---------ECRLGHCPDPV-LVNGEFSSSGPV-NVSDKITFMCNDHYILKGSNR
.. : ::: ::: : . :::. .: ::::.:.: : : : :.::
CCDS47 STLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSAN
90 100 110 120 130 140
120 130 140 150 160 170
pF1KE1 SQCLEDHTWAPPFPICKSRD--CDPPGNPVHGYFEGNNFTLGSTISYYCEDRYYLVGVQE
: . :. :: . :. :: :. :... : ....:.: : : :.
CCDS47 RTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLEDSVTYHCSRGLTLRGSQR
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE1 QQCVDG-EWSSALPVCK--LIQEAPKPECEKALLAFQESKNLCEAMENFMQQLKESGMTM
. : .: ::.. : :. .. ..:. : : .. :.
CCDS47 RTCQEGGSWSGTEPSCQDSFMYDTPQEVAEAFLSSLTETIEGVDAEDGHGPGEQQKRKIV
210 220 230 240 250 260
240 250
pF1KE1 EELKYSLELKKAELKAKLL
CCDS47 LDPSGSMNIYLVLDGSDSIGASNFTGAKKCLVNLIEKVASYGVKPRYGLVTYATYPKIWV
270 280 290 300 310 320
252 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:40:21 2016 done: Sun Nov 6 18:40:22 2016
Total Scan time: 1.960 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]