Result of FASTA (ccds) for
pFN21AE1745
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1745, 247 aa
1>>>pF1KE1745 247 - 247 aa - 247 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1812+/-0.000678; mu= 15.0944+/- 0.041
mean_var=63.2974+/-12.667, 0's: 0 Z-trim(110.3): 169 B-trim: 0 in 0/50
Lambda= 0.161206
statistics sampled from 11325 (11499) to 11325 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.733), E-opt: 0.2 (0.353), width: 16
Scan time: 2.140
The best scores are: opt bits E(32554)
CCDS9630.1 CMA1 gene_id:1215|Hs108|chr14 ( 247) 1697 402.8 1.1e-112
CCDS76666.1 CMA1 gene_id:1215|Hs108|chr14 ( 136) 945 227.7 3.1e-60
CCDS9631.1 CTSG gene_id:1511|Hs108|chr14 ( 255) 855 206.9 1e-53
CCDS9633.1 GZMB gene_id:3002|Hs108|chr14 ( 247) 832 201.6 4.1e-52
CCDS9632.1 GZMH gene_id:2999|Hs108|chr14 ( 246) 775 188.3 4e-48
CCDS32860.1 PRTN3 gene_id:5657|Hs108|chr19 ( 256) 565 139.5 2.1e-33
CCDS12046.1 CFD gene_id:1675|Hs108|chr19 ( 253) 547 135.3 3.8e-32
CCDS12812.1 KLK7 gene_id:5650|Hs108|chr19 ( 253) 546 135.1 4.4e-32
CCDS82261.1 CFD gene_id:1675|Hs108|chr19 ( 260) 538 133.2 1.7e-31
CCDS3965.1 GZMA gene_id:3001|Hs108|chr5 ( 262) 527 130.7 9.8e-31
CCDS12813.1 KLK8 gene_id:11202|Hs108|chr19 ( 260) 504 125.3 4e-29
CCDS42600.1 KLK8 gene_id:11202|Hs108|chr19 ( 305) 504 125.3 4.5e-29
CCDS12823.2 KLK14 gene_id:43847|Hs108|chr19 ( 267) 498 123.9 1.1e-28
CCDS5872.1 PRSS1 gene_id:5644|Hs108|chr7 ( 247) 493 122.7 2.2e-28
CCDS77203.1 PRSS57 gene_id:400668|Hs108|chr19 ( 282) 488 121.6 5.6e-28
CCDS12822.1 KLK13 gene_id:26085|Hs108|chr19 ( 277) 486 121.1 7.6e-28
CCDS12041.1 PRSS57 gene_id:400668|Hs108|chr19 ( 283) 486 121.1 7.7e-28
CCDS12809.1 KLK4 gene_id:9622|Hs108|chr19 ( 254) 485 120.9 8.3e-28
CCDS56570.1 PRSS3 gene_id:5646|Hs108|chr9 ( 240) 484 120.6 9.3e-28
CCDS6545.1 PRSS3 gene_id:5646|Hs108|chr9 ( 247) 484 120.6 9.5e-28
CCDS56571.1 PRSS3 gene_id:5646|Hs108|chr9 ( 261) 484 120.7 1e-27
CCDS47958.1 PRSS3 gene_id:5646|Hs108|chr9 ( 304) 484 120.7 1.1e-27
CCDS3964.1 GZMK gene_id:3003|Hs108|chr5 ( 264) 483 120.4 1.2e-27
CCDS83236.1 PRSS2 gene_id:5645|Hs108|chr7 ( 247) 454 113.7 1.2e-25
CCDS12811.1 KLK6 gene_id:5653|Hs108|chr19 ( 244) 451 113.0 1.9e-25
CCDS12821.1 KLK12 gene_id:43849|Hs108|chr19 ( 248) 449 112.5 2.7e-25
CCDS12819.1 KLK11 gene_id:11012|Hs108|chr19 ( 250) 442 110.9 8.4e-25
CCDS12818.1 KLK11 gene_id:11012|Hs108|chr19 ( 282) 442 110.9 9.3e-25
CCDS12816.1 KLK9 gene_id:284366|Hs108|chr19 ( 250) 440 110.4 1.2e-24
CCDS32489.1 CTRB2 gene_id:440387|Hs108|chr16 ( 263) 425 106.9 1.4e-23
CCDS12031.1 GZMM gene_id:3004|Hs108|chr19 ( 257) 423 106.5 1.8e-23
CCDS32490.1 CTRB1 gene_id:1504|Hs108|chr16 ( 263) 422 106.2 2.2e-23
CCDS59414.1 KLK7 gene_id:5650|Hs108|chr19 ( 181) 413 104.1 6.9e-23
CCDS12820.1 KLK12 gene_id:43849|Hs108|chr19 ( 254) 412 103.9 1.1e-22
CCDS10852.1 CTRL gene_id:1506|Hs108|chr16 ( 264) 412 103.9 1.1e-22
CCDS5279.1 PLG gene_id:5340|Hs108|chr6 ( 810) 417 105.3 1.3e-22
CCDS43523.1 LPA gene_id:4018|Hs108|chr6 (2040) 414 104.9 4.4e-22
CCDS59243.1 GZMH gene_id:2999|Hs108|chr14 ( 160) 395 99.8 1.1e-21
CCDS12810.1 KLK5 gene_id:25818|Hs108|chr19 ( 293) 394 99.8 2.2e-21
CCDS12044.1 AZU1 gene_id:566|Hs108|chr19 ( 251) 389 98.6 4.3e-21
CCDS43129.2 TMPRSS7 gene_id:344805|Hs108|chr3 ( 717) 369 94.2 2.6e-19
CCDS156.1 CTRC gene_id:11330|Hs108|chr1 ( 268) 362 92.3 3.6e-19
CCDS13571.1 TMPRSS15 gene_id:5651|Hs108|chr21 (1019) 360 92.1 1.5e-18
CCDS74856.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 802) 358 91.6 1.7e-18
CCDS13941.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 811) 358 91.6 1.7e-18
CCDS8812.1 CELA1 gene_id:1990|Hs108|chr12 ( 258) 352 90.0 1.7e-18
CCDS83235.1 PRSS2 gene_id:5645|Hs108|chr7 ( 261) 351 89.7 2e-18
CCDS220.1 CELA3A gene_id:10136|Hs108|chr1 ( 270) 350 89.5 2.5e-18
CCDS12045.1 ELANE gene_id:1991|Hs108|chr19 ( 267) 347 88.8 4e-18
CCDS74240.1 GZMM gene_id:3004|Hs108|chr19 ( 218) 344 88.1 5.4e-18
>>CCDS9630.1 CMA1 gene_id:1215|Hs108|chr14 (247 aa)
initn: 1697 init1: 1697 opt: 1697 Z-score: 2136.3 bits: 402.8 E(32554): 1.1e-112
Smith-Waterman score: 1697; 100.0% identity (100.0% similar) in 247 aa overlap (1-247:1-247)
10 20 30 40 50 60
pF1KE1 MLLLPLPLLLFLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 MLLLPLPLLLFLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 VLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 SLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 FDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWI
190 200 210 220 230 240
pF1KE1 NQILQAN
:::::::
CCDS96 NQILQAN
>>CCDS76666.1 CMA1 gene_id:1215|Hs108|chr14 (136 aa)
initn: 945 init1: 945 opt: 945 Z-score: 1194.9 bits: 227.7 E(32554): 3.1e-60
Smith-Waterman score: 945; 100.0% identity (100.0% similar) in 136 aa overlap (112-247:1-136)
90 100 110 120 130 140
pF1KE1 TEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPG
::::::::::::::::::::::::::::::
CCDS76 MLLKLKEKASLTLAVGTLPFPSQFNFVPPG
10 20 30
150 160 170 180 190 200
pF1KE1 RMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKG
40 50 60 70 80 90
210 220 230 240
pF1KE1 DSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQAN
::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 DSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQAN
100 110 120 130
>>CCDS9631.1 CTSG gene_id:1511|Hs108|chr14 (255 aa)
initn: 843 init1: 621 opt: 855 Z-score: 1077.7 bits: 206.9 E(32554): 1e-53
Smith-Waterman score: 855; 52.4% identity (77.6% similar) in 246 aa overlap (3-246:1-244)
10 20 30 40 50
pF1KE1 MLLLPLPLLL-FLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRN
. :: ::: ::: . ::::::::: : .::::::::::.: . : :. :::::.:..
CCDS96 MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSR-CGGFLVRED
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 FVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEK
:::::::: : .:.:::::::: ..:.: :.. . . .:::.:: :...:::::.:...
CCDS96 FVLTAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRR
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 ASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSH-F
. . :. . .: . . :: .: ::::::.. .. :.:::.::.::.. . : . :
CCDS96 VRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVS-MRRGTDTLREVQLRVQRDRQCLRIF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 RDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRP
..: :.:::. :. :.:::::::::::: .::.::::::.:.. :: ::::.: . :
CCDS96 GSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLP
180 190 200 210 220 230
240
pF1KE1 WINQILQAN
:: ...
CCDS96 WIRTTMRSFKLLDQMETPL
240 250
>>CCDS9633.1 GZMB gene_id:3002|Hs108|chr14 (247 aa)
initn: 839 init1: 426 opt: 832 Z-score: 1049.0 bits: 201.6 E(32554): 4.1e-52
Smith-Waterman score: 832; 53.7% identity (74.8% similar) in 246 aa overlap (3-245:1-245)
10 20 30 40 50
pF1KE1 MLLLPLPLLL-FLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRN
. :. ::: ::: ::.::::::: : ::::::::::: .. .. : ::::::: .
CCDS96 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYL-MIWDQKSLKRCGGFLIRDD
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 FVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEK
:::::::: : ::.:::::::: :.: : : . : . . :: :: ... .:::::.:..:
CCDS96 FVLTAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 ASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQAC-SHF
:. : :: : .::. : ::. : :::::.:. : : ::::::. ... . : : .
CCDS96 AKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 RDF-DHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYR
: . : ...::::.:. :..:::::::::.: ::::::::::... :: . :..: .
CCDS96 RHYYDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFV
180 190 200 210 220 230
240
pF1KE1 PWINQILQAN
::.. ..
CCDS96 HWIKKTMKRY
240
>>CCDS9632.1 GZMH gene_id:2999|Hs108|chr14 (246 aa)
initn: 637 init1: 374 opt: 775 Z-score: 977.4 bits: 188.3 E(32554): 4e-48
Smith-Waterman score: 775; 48.4% identity (74.4% similar) in 246 aa overlap (3-245:1-244)
10 20 30 40 50
pF1KE1 MLLLPLPLLL-FLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRN
. :. ::: ::: : . ::::: : :::::::::..... .. : :::.:.:..
CCDS96 MQPFLLLLAFLLTPGAGTEEIIGGHEAKPHSRPYMAFVQFLQEKS-RKRCGGILVRKD
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 FVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEK
:::::::: : ::.:::::::: :.: : : . : . . :: :: ... .:::::.:..:
CCDS96 FVLTAAHCQGSSINVTLGAHNIKEQERTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 ASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFR
:. : :: : .::. : ::..: ::::: .. .. . ::::: : .. : ..
CCDS96 AKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVS-MSTLATTLQEVLLTVQKDCQCERLF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 --DFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYR
.... ..:::.:.::...:::::::::.: :::::.::: . . ::.:. ..::.
CCDS96 HGNYSRATEICVGDPKKTQTGFKGDSGGPLVCKDVAQGILSYGNKKGTPPGVYIKVSHFL
180 190 200 210 220 230
240
pF1KE1 PWINQILQAN
:::.. ..
CCDS96 PWIKRTMKRL
240
>>CCDS32860.1 PRTN3 gene_id:5657|Hs108|chr19 (256 aa)
initn: 404 init1: 131 opt: 565 Z-score: 713.2 bits: 139.5 E(32554): 2.1e-33
Smith-Waterman score: 565; 40.4% identity (66.1% similar) in 245 aa overlap (8-245:14-248)
10 20 30 40 50
pF1KE1 MLLLPLPLLLFLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGF
:: .:: . :.:.::.:: : .:::::::: :.. .: :.::::
CCDS32 MAHRPPSPALASVLLALLLSGAARAAEIVGGHEAQPHSRPYMASLQM-RGNPGSHFCGGT
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 LIRRNFVLTAAHC----AGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHD
::. .:::::::: : ..:.:::::. .: : :.. : . : . .:.. . .:
CCDS32 LIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLN-NYDAENKLND
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 IMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLM
..:..:. :.:. .:.:. .:.: . :: : .: . ::::.:. : ...:::... ..
CCDS32 VLLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 DPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSY---GRSDAKPP
: ::. :. ::. . :::::::.: :. ::: :. : . :
CCDS32 T------FFCRPHNI--CTFVPRRKAGICFGDSGGPLICDGIIQGIDSFVIWGCATRLFP
180 190 200 210 220 230
230 240
pF1KE1 AVFTRISHYRPWINQILQAN
:::.. : :: . :.
CCDS32 DFFTRVALYVDWIRSTLRRVEAKGRP
240 250
>>CCDS12046.1 CFD gene_id:1675|Hs108|chr19 (253 aa)
initn: 493 init1: 290 opt: 547 Z-score: 690.6 bits: 135.3 E(32554): 3.8e-32
Smith-Waterman score: 547; 36.9% identity (64.3% similar) in 249 aa overlap (6-244:10-252)
10 20 30 40 50
pF1KE1 MLLLPLPLLLFLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLI
: :: :. :.:.:: : . :.::::: ... :: ...::: :.
CCDS12 MHSWERLAVLVLLGAAACAAPPRGRILGGREAEAHARPYMASVQL---NG-AHLCGGVLV
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 RRNFVLTAAHC----AGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIM
...::.:::: : .. : ::::.... : . . .:.. :: . .:. ::..
CCDS12 AEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 LLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDP
::.:.:::.: :: ::. : :: .: ::::: .. :.::.: : ..:
CCDS12 LLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDR
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 QACSHFRDFDHNLQ---LCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGR---SDAKP
.:.. : . .:. . : ... ::::::::.:.:: .:.:. : .. :
CCDS12 ATCNRRTHHDGAITERLMCAESNR--RDSCKGDSGGPLVCGGVLEGVVTSGSRVCGNRKK
180 190 200 210 220 230
230 240
pF1KE1 PAVFTRISHYRPWINQILQAN
:...::.. : ::...:
CCDS12 PGIYTRVASYAAWIDSVLA
240 250
>>CCDS12812.1 KLK7 gene_id:5650|Hs108|chr19 (253 aa)
initn: 444 init1: 220 opt: 546 Z-score: 689.4 bits: 135.1 E(32554): 4.4e-32
Smith-Waterman score: 546; 38.3% identity (66.4% similar) in 256 aa overlap (2-245:5-250)
10 20 30 40 50
pF1KE1 MLLLPLPLLLFLLC-----SRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCG
::::: .::. : .:.. .:: :. : :.:. ... .: . ::
CCDS12 MARSLLLPLQILLLSLALETAGEEAQGDKIIDGAPCARGSHPW----QVALLSGNQLHCG
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 GFLIRRNFVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIM
: :. . .::::::: :: ::. .. ... :.... :.:::: :.:.: .:.:
CCDS12 GVLVNERWVLTAAHCKMNEYTVHLGSDTLGDRRA--QRIKASKSFRHPGYSTQTHVNDLM
60 70 80 90 100 110
120 130 140 150 160
pF1KE1 LLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRT---GVLKPGSDTLQEVKLRL
:.::. .: :. : . .::. . ::: : :.::: : : : :: :. : ..:
CCDS12 LVKLNSQARLSSMVKKVRLPSRCE--PPGTTCTVSGWGTTTSPDVTFP-SD-LMCVDVKL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 MDPQACSH-FRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSD-AKP-
..:: :.. ..:. .: .::.: : . :.: .:::::::.: :. ::.::.: ..:
CCDS12 ISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPLVCRGTLQGLVSWGTFPCGQPN
180 190 200 210 220 230
230 240
pF1KE1 -PAVFTRISHYRPWINQILQAN
:.:.:.. .. :::. ..
CCDS12 DPGVYTQVCKFTKWINDTMKKHR
240 250
>>CCDS82261.1 CFD gene_id:1675|Hs108|chr19 (260 aa)
initn: 470 init1: 267 opt: 538 Z-score: 679.2 bits: 133.2 E(32554): 1.7e-31
Smith-Waterman score: 538; 37.4% identity (66.0% similar) in 235 aa overlap (20-244:31-259)
10 20 30 40
pF1KE1 MLLLPLPLLLFLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSK
:.:.:: : . :.::::: ... :: ..
CCDS82 MHSWERLAVLVLLGAAACGEEAWAWAAPPRGRILGGREAEAHARPYMASVQL---NG-AH
10 20 30 40 50
50 60 70 80 90 100
pF1KE1 FCGGFLIRRNFVLTAAHC----AGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTS
.::: :. ...::.:::: : .. : ::::.... : . . .:.. :: . .
CCDS82 LCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPD
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 TLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEV
:. ::..::.:.:::.: :: ::. : :: .: ::::: .. :.::.:
CCDS82 TIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE1 KLRLMDPQACSHFRDFDHNLQ---LCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGR-
: ..: .:.. : . .:. . :. .. ::::::::.:.:: .:.:. :
CCDS82 LLPVLDRATCNRRTHHDGAITERLMCAESNRR--DSCKGDSGGPLVCGGVLEGVVTSGSR
180 190 200 210 220 230
230 240
pF1KE1 --SDAKPPAVFTRISHYRPWINQILQAN
.. : :...::.. : ::...:
CCDS82 VCGNRKKPGIYTRVASYAAWIDSVLA
240 250 260
>>CCDS3965.1 GZMA gene_id:3001|Hs108|chr5 (262 aa)
initn: 523 init1: 291 opt: 527 Z-score: 665.3 bits: 130.7 E(32554): 9.8e-31
Smith-Waterman score: 541; 40.7% identity (66.7% similar) in 231 aa overlap (21-240:28-254)
10 20 30 40 50
pF1KE1 MLLLPLPLLLFLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGG
.::::.: ::::::: .. : . .:.:
CCDS39 MRNSYRFLASSLSVVVSLLLIPEDVCEKIIGGNEVTPHSRPYM----VLLSLDRKTICAG
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 FLIRRNFVLTAAHCA-GRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIM
:: ...::::::: .. : ::::.::.:: : : . : :.: .: :. .: . :.
CCDS39 ALIAKDWVLTAAHCNLNKRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 LLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDP
::.: :::... : : .:.. . : :: ::.::::::: ::::.::.. ..:
CCDS39 LLQLMEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVNITIIDR
120 130 140 150 160 170
180 190 200 210 220
pF1KE1 QACSHFRDFDHNL-----QLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGR----SD
..:. .. : ..:.:. : ... .::::.:::: :: .:..:.: .:
CCDS39 KVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEGVFRGVTSFGLENKCGD
180 190 200 210 220 230
230 240
pF1KE1 AKPPAVFTRISH-YRPWINQILQAN
. :.:. .:. . ::
CCDS39 PRGPGVYILLSKKHLNWIIMTIKGAV
240 250 260
247 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:28:44 2016 done: Sun Nov 6 14:28:45 2016
Total Scan time: 2.140 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]