FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1734, 241 aa
  1>>>pF1KE1734 241 - 241 aa - 241 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1167+/-0.000653; mu= 15.4151+/- 0.039
 mean_var=61.1838+/-12.282, 0's: 0 Z-trim(110.7): 29  B-trim: 343 in 2/50
 Lambda= 0.163967
 statistics sampled from 11818 (11839) to 11818 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.75), E-opt: 0.2 (0.364), width:  16
 Scan time:  2.380

The best scores are:                                      opt bits E(32554)
CCDS7555.1 GSTO1 gene_id:9446|Hs108|chr10          ( 241) 1627 392.7 1.1e-109
CCDS53573.1 GSTO1 gene_id:9446|Hs108|chr10         ( 213) 1440 348.4 2.1e-96
CCDS7556.1 GSTO2 gene_id:119391|Hs108|chr10        ( 243) 1097 267.3 6.4e-72
CCDS53575.1 GSTO2 gene_id:119391|Hs108|chr10       ( 215)  940 230.2 8.7e-61
CCDS53572.1 GSTO1 gene_id:9446|Hs108|chr10         ( 208)  835 205.3 2.5e-53
CCDS53574.1 GSTO2 gene_id:119391|Hs108|chr10       ( 209)  668 165.8   2e-41


>>CCDS7555.1 GSTO1 gene_id:9446|Hs108|chr10               (241 aa)
 initn: 1627 init1: 1627 opt: 1627  Z-score: 2082.3  bits: 392.7 E(32554): 1.1e-109
Smith-Waterman score: 1627; 99.6% identity (99.6% similar) in 241 aa overlap (1-241:1-241)

               10        20        30        40        50        60
pF1KE1 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 SKVPSLVGSFIRSQNKEDYDGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW
       ::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS75 SKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDYG
              190       200       210       220       230       240

        
pF1KE1 L
       :
CCDS75 L
        

>>CCDS53573.1 GSTO1 gene_id:9446|Hs108|chr10              (213 aa)
 initn: 1440 init1: 1440 opt: 1440  Z-score: 1844.1  bits: 348.4 E(32554): 2.1e-96
Smith-Waterman score: 1440; 99.5% identity (99.5% similar) in 213 aa overlap (29-241:1-213)

               10        20        30        40        50        60
pF1KE1 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP
                                   ::::::::::::::::::::::::::::::::
CCDS53                             MRFCPFAERTRLVLKAKGIRHEVININLKNKP
                                           10        20        30  

               70        80        90       100       110       120
pF1KE1 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF
             40        50        60        70        80        90  

              130       140       150       160       170       180
pF1KE1 SKVPSLVGSFIRSQNKEDYDGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW
       ::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS53 SKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW
            100       110       120       130       140       150  

              190       200       210       220       230       240
pF1KE1 FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDYG
            160       170       180       190       200       210  

        
pF1KE1 L
       :
CCDS53 L
        

>>CCDS7556.1 GSTO2 gene_id:119391|Hs108|chr10             (243 aa)
 initn: 1103 init1: 683 opt: 1097  Z-score: 1404.7  bits: 267.3 E(32554): 6.4e-72
Smith-Waterman score: 1097; 64.0% identity (86.8% similar) in 242 aa overlap (1-241:1-242)

               10        20        30        40        50        60
pF1KE1 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP
       :::...:.::::: :::::::: ::::::::::...::::::::: :::::.::::.:::
CCDS75 MSGDATRTLGKGSQPPGPVPEGLIRIYSMRFCPYSHRTRLVLKAKDIRHEVVNINLRNKP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF
       ::.. :.::: .::::.:: ::::::.:.:::::.::::.::.: ::::.: :::.::::
CCDS75 EWYYTKHPFGHIPVLETSQCQLIYESVIACEYLDDAYPGRKLFPYDPYERARQKMLLELF
               70        80        90       100       110       120

               130       140       150       160       170         
pF1KE1 SKVPSLVGS-FIRSQNKEDYDGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWP
        ::: :.   ..  .  ..  .::  .:.::..:::.:  ..::::::. :::::::.::
CCDS75 CKVPHLTKECLVALRCGRECTNLKAALRQEFSNLEEILEYQNTTFFGGTCISMIDYLLWP
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KE1 WFERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDY
       :::::... . .::.::: :.::..::: :::: ::: ... .::::.::.::.:.: :.
CCDS75 WFERLDVYGILDCVSHTPALRLWISAMKWDPTVCALLMDKSIFQGFLNLYFQNNPNAFDF
              190       200       210       220       230       240

     240  
pF1KE1 GL 
       :: 
CCDS75 GLC
          

>>CCDS53575.1 GSTO2 gene_id:119391|Hs108|chr10            (215 aa)
 initn: 946 init1: 526 opt: 940  Z-score: 1204.8  bits: 230.2 E(32554): 8.7e-61
Smith-Waterman score: 940; 62.1% identity (86.0% similar) in 214 aa overlap (29-241:1-214)

               10        20        30        40        50        60
pF1KE1 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP
                                   :::::...::::::::: :::::.::::.:::
CCDS53                             MRFCPYSHRTRLVLKAKDIRHEVVNINLRNKP
                                           10        20        30  

               70        80        90       100       110       120
pF1KE1 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF
       ::.. :.::: .::::.:: ::::::.:.:::::.::::.::.: ::::.: :::.::::
CCDS53 EWYYTKHPFGHIPVLETSQCQLIYESVIACEYLDDAYPGRKLFPYDPYERARQKMLLELF
             40        50        60        70        80        90  

               130       140       150       160       170         
pF1KE1 SKVPSLVGS-FIRSQNKEDYDGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWP
        ::: :.   ..  .  ..  .::  .:.::..:::.:  ..::::::. :::::::.::
CCDS53 CKVPHLTKECLVALRCGRECTNLKAALRQEFSNLEEILEYQNTTFFGGTCISMIDYLLWP
            100       110       120       130       140       150  

     180       190       200       210       220       230         
pF1KE1 WFERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDY
       :::::... . .::.::: :.::..::: :::: ::: ... .::::.::.::.:.: :.
CCDS53 WFERLDVYGILDCVSHTPALRLWISAMKWDPTVCALLMDKSIFQGFLNLYFQNNPNAFDF
            160       170       180       190       200       210  

     240  
pF1KE1 GL 
       :: 
CCDS53 GLC
          

>>CCDS53572.1 GSTO1 gene_id:9446|Hs108|chr10              (208 aa)
 initn: 835 init1: 835 opt: 835  Z-score: 1070.8  bits: 205.3 E(32554): 2.5e-53
Smith-Waterman score: 1349; 86.3% identity (86.3% similar) in 241 aa overlap (1-241:1-208)

               10        20        30        40        50        60
pF1KE1 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 SKVPSLVGSFIRSQNKEDYDGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW
       :::                                 ::::::::::::::::::::::::
CCDS53 SKV---------------------------------LTNKKTTFFGGNSISMIDYLIWPW
                                               130       140       

              190       200       210       220       230       240
pF1KE1 FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDYG
       150       160       170       180       190       200       

        
pF1KE1 L
       :
CCDS53 L
        

>>CCDS53574.1 GSTO2 gene_id:119391|Hs108|chr10            (209 aa)
 initn: 668 init1: 668 opt: 668  Z-score: 857.2  bits: 165.8 E(32554): 2e-41
Smith-Waterman score: 970; 60.2% identity (78.4% similar) in 241 aa overlap (1-241:1-208)

               10        20        30        40        50        60
pF1KE1 MSGESARSLGKGSAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKP
       :::...:.::::: :::::::: ::::::::::...::::::::: :::::.::::.:::
CCDS53 MSGDATRTLGKGSQPPGPVPEGLIRIYSMRFCPYSHRTRLVLKAKDIRHEVVNINLRNKP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 EWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELF
       ::.. :.::: .::::.:: ::::::.:.:::::.::::.::.: ::::.: :::.::::
CCDS53 EWYYTKHPFGHIPVLETSQCQLIYESVIACEYLDDAYPGRKLFPYDPYERARQKMLLELF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 SKVPSLVGSFIRSQNKEDYDGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWPW
        :.       .. ::                          ::::::. :::::::.:::
CCDS53 CKI-------LEYQN--------------------------TTFFGGTCISMIDYLLWPW
                                               130       140       

              190       200       210       220       230       240
pF1KE1 FERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLELYLQNSPEACDYG
       ::::... . .::.::: :.::..::: :::: ::: ... .::::.::.::.:.: :.:
CCDS53 FERLDVYGILDCVSHTPALRLWISAMKWDPTVCALLMDKSIFQGFLNLYFQNNPNAFDFG
       150       160       170       180       190       200       

         
pF1KE1 L 
       : 
CCDS53 LC
         




241 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 15:22:41 2016 done: Sun Nov  6 15:22:42 2016
 Total Scan time:  2.380 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]