Result of FASTA (ccds) for
pFN21AE1721
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1721, 210 aa
1>>>pF1KE1721 210 - 210 aa - 210 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.8354+/-0.000838; mu= -1.8932+/- 0.051
mean_var=165.0402+/-32.937, 0's: 0 Z-trim(113.2): 13 B-trim: 96 in 1/50
Lambda= 0.099834
statistics sampled from 13880 (13888) to 13880 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.427), width: 16
Scan time: 2.330
The best scores are: opt bits E(32554)
CCDS53841.1 BCL7A gene_id:605|Hs108|chr12 ( 210) 1375 209.0 1.7e-54
CCDS9226.1 BCL7A gene_id:605|Hs108|chr12 ( 231) 1233 188.6 2.7e-48
CCDS5550.1 BCL7B gene_id:9275|Hs108|chr7 ( 202) 497 82.5 2e-16
CCDS10693.1 BCL7C gene_id:9274|Hs108|chr16 ( 217) 418 71.2 5.6e-13
CCDS67012.1 BCL7C gene_id:9274|Hs108|chr16 ( 242) 413 70.5 1e-12
CCDS56489.1 BCL7B gene_id:9275|Hs108|chr7 ( 145) 386 66.5 9.6e-12
>>CCDS53841.1 BCL7A gene_id:605|Hs108|chr12 (210 aa)
initn: 1375 init1: 1375 opt: 1375 Z-score: 1091.6 bits: 209.0 E(32554): 1.7e-54
Smith-Waterman score: 1375; 100.0% identity (100.0% similar) in 210 aa overlap (1-210:1-210)
10 20 30 40 50 60
pF1KE1 MSGRSVRAETRSRAKDDIKRVMAAIEKVRKWEKKWVTVGDTSLRIYKWVPVTEPKVDDKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MSGRSVRAETRSRAKDDIKRVMAAIEKVRKWEKKWVTVGDTSLRIYKWVPVTEPKVDDKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KNKKKGKDEKCGSEVTTPENSSSPGMMDMHDDNSNQSSIADASPIKQENSSNSSPAPEPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KNKKKGKDEKCGSEVTTPENSSSPGMMDMHDDNSNQSSIADASPIKQENSSNSSPAPEPN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SAVPSDGTEAKVDEAQADGKEHPGAEDASDEQNSQSSMEHSMNSSEKVDRQPSGDSGLAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SAVPSDGTEAKVDEAQADGKEHPGAEDASDEQNSQSSMEHSMNSSEKVDRQPSGDSGLAA
130 140 150 160 170 180
190 200 210
pF1KE1 ETSAISQDLEGVPPSKKMKLEASQQNSEEM
::::::::::::::::::::::::::::::
CCDS53 ETSAISQDLEGVPPSKKMKLEASQQNSEEM
190 200 210
>>CCDS9226.1 BCL7A gene_id:605|Hs108|chr12 (231 aa)
initn: 1227 init1: 1227 opt: 1233 Z-score: 980.5 bits: 188.6 E(32554): 2.7e-48
Smith-Waterman score: 1323; 90.9% identity (90.9% similar) in 231 aa overlap (1-210:1-231)
10 20 30 40 50 60
pF1KE1 MSGRSVRAETRSRAKDDIKRVMAAIEKVRKWEKKWVTVGDTSLRIYKWVPVTEPKVDDKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 MSGRSVRAETRSRAKDDIKRVMAAIEKVRKWEKKWVTVGDTSLRIYKWVPVTEPKVDDKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KNKKKGKDEKCGSEVTTPENSSSPGMMDMHDDNSNQSSIADASPIKQENSSNSSPAPEPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 KNKKKGKDEKCGSEVTTPENSSSPGMMDMHDDNSNQSSIADASPIKQENSSNSSPAPEPN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SAVPSDGTEAKVDEAQADGKEHPGAEDASDEQNSQSSMEHSMNSSEKVDRQPSGDSGLAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 SAVPSDGTEAKVDEAQADGKEHPGAEDASDEQNSQSSMEHSMNSSEKVDRQPSGDSGLAA
130 140 150 160 170 180
190 200 210
pF1KE1 ETSAISQ---------------------DLEGVPPSKKMKLEASQQNSEEM
::::::: :::::::::::::::::::::::
CCDS92 ETSAISQVPRSRSQRGSQIGREPIGLSGDLEGVPPSKKMKLEASQQNSEEM
190 200 210 220 230
>>CCDS5550.1 BCL7B gene_id:9275|Hs108|chr7 (202 aa)
initn: 483 init1: 375 opt: 497 Z-score: 408.5 bits: 82.5 E(32554): 2e-16
Smith-Waterman score: 508; 45.3% identity (70.6% similar) in 201 aa overlap (1-197:1-187)
10 20 30 40 50 60
pF1KE1 MSGRSVRAETRSRAKDDIKRVMAAIEKVRKWEKKWVTVGDTSLRIYKWVPVTEPKVDDKN
:::::::::::::::::::.:::::::::::::::::::::::::.::::::. : .:.
CCDS55 MSGRSVRAETRSRAKDDIKKVMAAIEKVRKWEKKWVTVGDTSLRIFKWVPVTDSKEKEKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KNKKKGKDEKCGSEVTTPENSSSPGMMDMHDDNSNQSSIADASPIKQENSSNSSPAPEPN
:..... : : . ::: .....:.::::::..:. .: ..:.::::.:. .
CCDS55 KSNSSAAREPNGFPSDASANSSL--LLEFQDENSNQSSVSDVYQLKVDSSTNSSPSPQQS
70 80 90 100 110
130 140 150 160 170
pF1KE1 SAV-PSDGTEAKVDEAQADGKEHPGAEDASDEQNSQSSMEHSMNSSEKVDRQPS--GDSG
.. :. .. ..:..: : . : : :. ::: .:. :. .
CCDS55 ESLSPAHTSDFRTDDSQP-----PTLGQEILE-------EPSLPSSEVADEPPTLTKEEP
120 130 140 150 160
180 190 200 210
pF1KE1 LAAETSAISQDLE-GVPPSKKMKLEASQQNSEEM
. ::... .. . :.:: :.
CCDS55 VPLETQVVEEEEDSGAPPLKRFCVDQPTVPQTASES
170 180 190 200
>>CCDS10693.1 BCL7C gene_id:9274|Hs108|chr16 (217 aa)
initn: 408 init1: 339 opt: 418 Z-score: 346.5 bits: 71.2 E(32554): 5.6e-13
Smith-Waterman score: 429; 37.6% identity (69.0% similar) in 213 aa overlap (1-198:1-210)
10 20 30 40 50 60
pF1KE1 MSGRSVRAETRSRAKDDIKRVMAAIEKVRKWEKKWVTVGDTSLRIYKWVPVTEPKVDDKN
:.::.::::::::::::::.:::.:::::.:::.:::::::::::.:::::..:. ...
CCDS10 MAGRTVRAETRSRAKDDIKKVMATIEKVRRWEKRWVTVGDTSLRIFKWVPVVDPQEEERR
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 K-----NKKKGKDEKCGSEVTTPENSSSPGMMDMHDDNSNQSSIADASPIKQENSSNSSP
. ....:.... .. ..:.... ..:..:.::::: ...: ... . . .
CCDS10 RAGGGAERSRGRERR--GRGASPRGGGPLILLDLNDENSNQSFHSEGS-LQKGTEPSPGG
70 80 90 100 110
120 130 140 150 160
pF1KE1 APEPNSAV-PSDGTEAKVDEAQAD--GKEH-PGAEDA--SDEQNSQSSMEH--SMNSSEK
.:.:. : :. :. .::: :.:. ::. : .:: .. : . .:
CCDS10 TPQPSRPVSPAGPPEGVPEEAQPPRLGQERDPGGITAGSTDEPPMLTKEEPVPELLEAEA
120 130 140 150 160 170
170 180 190 200 210
pF1KE1 VDRQPSGDSGLAAETSAI--SQDLEGVPPSKKMKLEASQQNSEEM
. : . . .: ..: ::.:: :..
CCDS10 PEAYPVFEPVPPVPEAAQGDTEDSEGAPPLKRICPNAPDP
180 190 200 210
>>CCDS67012.1 BCL7C gene_id:9274|Hs108|chr16 (242 aa)
initn: 376 init1: 339 opt: 413 Z-score: 341.8 bits: 70.5 E(32554): 1e-12
Smith-Waterman score: 418; 38.4% identity (71.7% similar) in 198 aa overlap (1-181:1-195)
10 20 30 40 50 60
pF1KE1 MSGRSVRAETRSRAKDDIKRVMAAIEKVRKWEKKWVTVGDTSLRIYKWVPVTEPKVDDKN
:.::.::::::::::::::.:::.:::::.:::.:::::::::::.:::::..:. ...
CCDS67 MAGRTVRAETRSRAKDDIKKVMATIEKVRRWEKRWVTVGDTSLRIFKWVPVVDPQEEERR
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 K-----NKKKGKDEKCGSEVTTPENSSSPGMMDMHDDNSNQSSIADASPIKQENSSNSSP
. ....:.... .. ..:.... ..:..:.::::: ...: ... . . .
CCDS67 RAGGGAERSRGRERR--GRGASPRGGGPLILLDLNDENSNQSFHSEGS-LQKGTEPSPGG
70 80 90 100 110
120 130 140 150 160
pF1KE1 APEPNSAV-PSDGTEAKVDEAQAD--GKEH-PGAEDA--SDEQNSQSSME------HSMN
.:.:. : :. :. .::: :.:. ::. : .:: .. : .. .
CCDS67 TPQPSRPVSPAGPPEGVPEEAQPPRLGQERDPGGITAGSTDEPPMLTKEEPVPELLEAED
120 130 140 150 160 170
170 180 190 200 210
pF1KE1 SSEKVDRQPSGDSGLAAETSAISQDLEGVPPSKKMKLEASQQNSEEM
:. .. :. ..:: .:
CCDS67 SGVRMTRRALHEKGLKTEPLRRLLPRRGLRTNVRPSSMAVPDTRAPGGGSKAPRAPRTIP
180 190 200 210 220 230
>>CCDS56489.1 BCL7B gene_id:9275|Hs108|chr7 (145 aa)
initn: 388 init1: 368 opt: 386 Z-score: 324.4 bits: 66.5 E(32554): 9.6e-12
Smith-Waterman score: 386; 59.6% identity (78.8% similar) in 104 aa overlap (1-104:1-102)
10 20 30 40 50 60
pF1KE1 MSGRSVRAETRSRAKDDIKRVMAAIEKVRKWEKKWVTVGDTSLRIYKWVPVTEPKVDDKN
:::::::::::::::::::.:::::::::::::::::::::::::.::::::. : .:.
CCDS56 MSGRSVRAETRSRAKDDIKKVMAAIEKVRKWEKKWVTVGDTSLRIFKWVPVTDSKEKEKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KNKKKGKDEKCGSEVTTPENSSSPGMMDMHDDNSNQSSIADASPIKQENSSNSSPAPEPN
:..... : : . ::: ...... . .: .:: :
CCDS56 KSNSSAAREPNGFPSDASANSSL--LLEFQEPSLPSSEVADEPPTLTKEEPVPLETQVVE
70 80 90 100 110
130 140 150 160 170 180
pF1KE1 SAVPSDGTEAKVDEAQADGKEHPGAEDASDEQNSQSSMEHSMNSSEKVDRQPSGDSGLAA
CCDS56 EEEDSGAPPLKRFCVDQPTVPQTASES
120 130 140
210 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:33:43 2016 done: Sun Nov 6 21:33:43 2016
Total Scan time: 2.330 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]