Result of FASTA (ccds) for
pFN21AE1715
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1715, 218 aa
1>>>pF1KE1715 218 - 218 aa - 218 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7751+/-0.00103; mu= 10.8985+/- 0.062
mean_var=77.6021+/-15.446, 0's: 0 Z-trim(104.0): 221 B-trim: 272 in 1/50
Lambda= 0.145592
statistics sampled from 7452 (7693) to 7452 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.615), E-opt: 0.2 (0.236), width: 16
Scan time: 2.000
The best scores are: opt bits E(32554)
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 1404 304.5 3.3e-83
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 1260 274.3 4.1e-74
CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15 ( 155) 937 206.4 8.3e-54
CCDS41413.1 RAB25 gene_id:57111|Hs108|chr1 ( 213) 804 178.5 2.8e-45
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 631 142.2 2.5e-34
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 615 138.8 2.5e-33
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 601 135.8 1.8e-32
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 590 133.6 9.6e-32
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 587 132.9 1.4e-31
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 582 131.9 3e-31
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 581 131.7 3.5e-31
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 580 131.5 4.1e-31
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 569 129.1 2e-30
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 568 128.9 2.4e-30
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 555 126.2 1.5e-29
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 552 125.6 2.3e-29
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 533 121.6 3.6e-28
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 530 121.0 6e-28
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 526 120.1 1.1e-27
CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX ( 213) 521 119.1 2.2e-27
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 511 117.0 9.3e-27
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 508 116.3 1.5e-26
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 503 115.3 2.9e-26
CCDS8338.1 RAB39A gene_id:54734|Hs108|chr11 ( 217) 503 115.3 3.1e-26
CCDS56537.1 RAB2A gene_id:5862|Hs108|chr8 ( 188) 499 114.4 4.8e-26
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 498 114.2 6.3e-26
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 497 114.0 8.1e-26
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 495 113.6 9.7e-26
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 495 113.6 1.1e-25
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1 ( 219) 494 113.4 1.1e-25
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 494 113.4 1.3e-25
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5 ( 227) 489 112.4 2.4e-25
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 486 111.7 3.6e-25
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 485 111.5 4.2e-25
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 478 110.0 1.1e-24
CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 ( 195) 469 108.1 3.9e-24
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 468 107.9 5.1e-24
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 462 106.6 1.1e-23
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 458 105.8 2e-23
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 458 105.8 2.2e-23
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 455 105.2 3e-23
CCDS10413.1 RAB40C gene_id:57799|Hs108|chr16 ( 281) 452 104.6 6.4e-23
CCDS11816.1 RAB40B gene_id:10966|Hs108|chr17 ( 278) 450 104.2 8.4e-23
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 448 103.7 9.4e-23
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 437 101.4 4.4e-22
CCDS14621.1 RAB33A gene_id:9363|Hs108|chrX ( 237) 437 101.4 4.9e-22
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX ( 201) 436 101.2 4.9e-22
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX ( 201) 435 101.0 5.7e-22
CCDS56275.1 RAB43 gene_id:339122|Hs108|chr3 ( 155) 433 100.5 6.1e-22
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4 ( 229) 434 100.8 7.4e-22
>>CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 (218 aa)
initn: 1404 init1: 1404 opt: 1404 Z-score: 1607.4 bits: 304.5 E(32554): 3.3e-83
Smith-Waterman score: 1404; 100.0% identity (100.0% similar) in 218 aa overlap (1-218:1-218)
10 20 30 40 50 60
pF1KE1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
130 140 150 160 170 180
190 200 210
pF1KE1 IADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
::::::::::::::::::::::::::::::::::::::
CCDS12 IADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
190 200 210
>>CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 (216 aa)
initn: 1249 init1: 1214 opt: 1260 Z-score: 1444.0 bits: 274.3 E(32554): 4.1e-74
Smith-Waterman score: 1260; 91.3% identity (96.3% similar) in 218 aa overlap (1-218:1-216)
10 20 30 40 50 60
pF1KE1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
::::::::::::::::::::::::::.::::::::::::::: ::..:::::::::::::
CCDS10 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
130 140 150 160 170 180
190 200 210
pF1KE1 IADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
..:: .: ::.:::: : :::::.. :: :.:::::.
CCDS10 MSDRRENDMSPSNNVVPIHVPPTTEN-KP-KVQCCQNI
190 200 210
>>CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15 (155 aa)
initn: 936 init1: 936 opt: 937 Z-score: 1079.5 bits: 206.4 E(32554): 8.3e-54
Smith-Waterman score: 937; 96.1% identity (98.0% similar) in 153 aa overlap (1-153:1-153)
10 20 30 40 50 60
pF1KE1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
::::::::::::::::::::::::::. . .:
CCDS58 LVGNKSDLRHLRAVPTDEARAFAEKNEANVRQTRK
130 140 150
190 200 210
pF1KE1 IADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
>>CCDS41413.1 RAB25 gene_id:57111|Hs108|chr1 (213 aa)
initn: 773 init1: 773 opt: 804 Z-score: 926.4 bits: 178.5 E(32554): 2.8e-45
Smith-Waterman score: 810; 60.5% identity (81.8% similar) in 220 aa overlap (2-218:4-213)
10 20 30 40 50
pF1KE1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK
::..: :...:::::::.:::::.:::::::::::. .:..::::::.::....
CCDS41 MGNGTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTA
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIV
..::::::::: ::::::::::::::::::::.:..:: :: :::::::: :::...::
CCDS41 AVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 IMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ
.::::::::: . : :::.::: :::.:.: :.::::::::::: ::...: ::. ::.
CCDS41 VMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK
120 130 140 150 160 170
180 190 200 210
pF1KE1 KQIADRAAHDESPGNNVVDISVPPTTDGQKPN---KLQCCQNL
.. ..: .:. :.. . ::.:. : :: .:
CCDS41 QR-------QNSIRTNA--ITLGSAQAGQEPGPGEKRACCISL
180 190 200 210
>>CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 (216 aa)
initn: 617 init1: 617 opt: 631 Z-score: 729.9 bits: 142.2 E(32554): 2.5e-34
Smith-Waterman score: 631; 48.4% identity (74.2% similar) in 217 aa overlap (8-215:3-216)
10 20 30 40 50 60
pF1KE1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
: :::: ..:::.::::: :: .:: ..:. ::::::..: ...::: :
CCDS95 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQI
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::: .:.:: .:::::.::::::::... :.... ::.. :.:..::.:::
CCDS95 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
:.::::::. : : .:..:::....: :.:::: . :::::: : :::: . :.
CCDS95 LIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKI-QQG
120 130 140 150 160 170
190 200 210
pF1KE1 IADRAAHDESPGNNV-----VDISVPPTTDGQKPNKLQ----CCQNL
. : .:.:. : .. .. :: :... .. . ::
CCDS95 LFD--VHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC
180 190 200 210
>>CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 (212 aa)
initn: 627 init1: 604 opt: 615 Z-score: 711.9 bits: 138.8 E(32554): 2.5e-33
Smith-Waterman score: 615; 48.3% identity (74.9% similar) in 211 aa overlap (8-215:3-212)
10 20 30 40 50 60
pF1KE1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
: :::: ..:::.::::: :: .:: ..:. ::::::..: : .::: :
CCDS61 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::: .:.:: .:::::.::::::::... :.... ::.. :.:..::.:::
CCDS61 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIM
60 70 80 90 100 110
130 140 150 160 170
pF1KE1 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-
:.::::::. : : .:..:::....: :.:::: ..:::::: : :::. ...
CCDS61 LIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV
120 130 140 150 160 170
180 190 200 210
pF1KE1 -QIADRAAHDE-SPGNNVVDISVPPTTDGQKPNKLQCCQNL
.: ..: . .: . ... . . ::. . ::
CCDS61 FDINNEANGIKIGPQHAATNATHAGNQGGQQAGG-GCC
180 190 200 210
>>CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 (201 aa)
initn: 609 init1: 590 opt: 601 Z-score: 696.4 bits: 135.8 E(32554): 1.8e-32
Smith-Waterman score: 603; 47.6% identity (72.2% similar) in 212 aa overlap (5-215:2-201)
10 20 30 40 50 60
pF1KE1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
. :::::::..:::::::::: :: ::. . .. :::::.: :.:..:::::
CCDS31 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.:.:::.::::: : ..:::.. . .: ::..::.:. .:. :. .
CCDS31 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
:::::::: ..: . :. ::.. .. :.:::: ..::::.:: .. .:: .:.
CCDS31 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKR
120 130 140 150 160 170
190 200 210
pF1KE1 IADRAAHD-ESPGNNVVDISVPPTTDGQKPNKLQCCQNL
.. :: : :. .. . : :. : ::
CCDS31 MGPGAASGGERPNLKIDSTPVKPAGGG-------CC
180 190 200
>>CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 (215 aa)
initn: 584 init1: 584 opt: 590 Z-score: 683.4 bits: 133.6 E(32554): 9.6e-32
Smith-Waterman score: 590; 50.0% identity (76.9% similar) in 186 aa overlap (1-186:1-186)
10 20 30 40 50 60
pF1KE1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
:.: .:.:.:: ..::: ::::: :: .::...: . ::::::.:: :.:.:. :
CCDS68 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.::.: .:::::.:::.::::... ::... :: . :. .. : ::.
CCDS68 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
:.:::.::. : : .::. :::.:.: :.:.:: . :::.:: . .::. ... .
CCDS68 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
130 140 150 160 170 180
190 200 210
pF1KE1 IADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
. ::
CCDS68 LDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
190 200 210
>>CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 (205 aa)
initn: 575 init1: 575 opt: 587 Z-score: 680.3 bits: 132.9 E(32554): 1.4e-31
Smith-Waterman score: 589; 45.6% identity (71.6% similar) in 215 aa overlap (1-215:1-205)
10 20 30 40 50 60
pF1KE1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
:.. . :::::::..:::::::::: :: ::. . .. :::::.: :.:..:::::
CCDS46 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.:.:::.::::: : ..:::.. . ...::..::.:. .:. :. .
CCDS46 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
::::: :: ..: :. ::.. .. :.:::: ..::::..: .. .:: .:.
CCDS46 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKR
130 140 150 160 170
190 200 210
pF1KE1 IADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
.. :. . .:: :.: .: ::
CCDS46 MGPGATAGGAEKSNVKIQSTPVKQSGGG-----CC
180 190 200
>>CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 (207 aa)
initn: 572 init1: 572 opt: 582 Z-score: 674.6 bits: 131.9 E(32554): 3e-31
Smith-Waterman score: 582; 47.3% identity (78.8% similar) in 184 aa overlap (8-191:5-188)
10 20 30 40 50 60
pF1KE1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::..:::::::::. :: ::... :: ::::..: :.:..::: :
CCDS10 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.:.::.::::::.: .:::::... ...:.. :......::.:.. :
CCDS10 KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
..::: :. : : .... .: ...:.:::: .:.:::::: .. .:. ...:.
CCDS10 ILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKM
120 130 140 150 160 170
190 200 210
pF1KE1 IADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
. .: .:
CCDS10 NDSNSAGAGGPVKITENRSKKTSFFRCSLL
180 190 200
218 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:28:30 2016 done: Sun Nov 6 13:28:30 2016
Total Scan time: 2.000 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]