FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1707, 207 aa 1>>>pF1KE1707 207 - 207 aa - 207 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.9472+/-0.00121; mu= 2.3054+/- 0.072 mean_var=157.7943+/-31.511, 0's: 0 Z-trim(106.6): 24 B-trim: 71 in 2/50 Lambda= 0.102101 statistics sampled from 9092 (9105) to 9092 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.28), width: 16 Scan time: 2.100 The best scores are: opt bits E(32554) CCDS878.1 SIKE1 gene_id:80143|Hs108|chr1 ( 207) 1305 203.7 6.7e-53 CCDS41371.1 SIKE1 gene_id:80143|Hs108|chr1 ( 211) 1287 201.1 4.3e-52 CCDS53767.1 FGFR1OP2 gene_id:26127|Hs108|chr12 ( 215) 667 109.7 1.3e-24 CCDS53766.1 FGFR1OP2 gene_id:26127|Hs108|chr12 ( 172) 454 78.3 3.1e-15 CCDS8709.1 FGFR1OP2 gene_id:26127|Hs108|chr12 ( 253) 454 78.4 4.3e-15 >>CCDS878.1 SIKE1 gene_id:80143|Hs108|chr1 (207 aa) initn: 1305 init1: 1305 opt: 1305 Z-score: 1063.2 bits: 203.7 E(32554): 6.7e-53 Smith-Waterman score: 1305; 100.0% identity (100.0% similar) in 207 aa overlap (1-207:1-207) 10 20 30 40 50 60 pF1KE1 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 MKDMSKYKPHILLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLMVAKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 MKDMSKYKPHILLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLMVAKK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 AVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELENKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 AVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELENKEL 130 140 150 160 170 180 190 200 pF1KE1 RELLSISSESLQARKENSMDTASQAIK ::::::::::::::::::::::::::: CCDS87 RELLSISSESLQARKENSMDTASQAIK 190 200 >>CCDS41371.1 SIKE1 gene_id:80143|Hs108|chr1 (211 aa) initn: 978 init1: 978 opt: 1287 Z-score: 1048.8 bits: 201.1 E(32554): 4.3e-52 Smith-Waterman score: 1287; 98.1% identity (98.1% similar) in 211 aa overlap (1-207:1-211) 10 20 30 40 50 pF1KE1 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQ----YQE ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: CCDS41 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQVRQRYQE 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 DASDMKDMSKYKPHILLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 DASDMKDMSKYKPHILLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 VAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 VAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELE 130 140 150 160 170 180 180 190 200 pF1KE1 NKELRELLSISSESLQARKENSMDTASQAIK ::::::::::::::::::::::::::::::: CCDS41 NKELRELLSISSESLQARKENSMDTASQAIK 190 200 210 >>CCDS53767.1 FGFR1OP2 gene_id:26127|Hs108|chr12 (215 aa) initn: 727 init1: 441 opt: 667 Z-score: 555.1 bits: 109.7 E(32554): 1.3e-24 Smith-Waterman score: 667; 51.4% identity (81.2% similar) in 208 aa overlap (1-203:1-200) 10 20 30 40 50 60 pF1KE1 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD ::::::: :.:::.:.::::.:: :::::..:..::..:: ::. ::::. .. CCDS53 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMK--------QYQEEIQE 10 20 30 40 50 70 80 90 100 110 pF1KE1 MKDMSKYKPHILL----SQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM ........:. : .::: :::.:::::.:: ::::::.::::::::::.::..:. CCDS53 LNEVARHRPRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLL 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 VAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELE .:.: : ..: ...:: :.....:.: ::. :::::...:..: :: ::.. ::: : CCDS53 MASKKDDPGIIMKLKEQHSKELQAHVDQITEMAAVMRKAIEIDEQQGCKEQERIFQLEQE 120 130 140 150 160 170 180 190 200 pF1KE1 NKELRELLSISSES-LQARKENSMDTASQAIK :: :::.:.:. :: :. ::... ...: CCDS53 NKGLREILQITRESFLNLRKDDASESTSLSALVTNSDLSLRKS 180 190 200 210 >>CCDS53766.1 FGFR1OP2 gene_id:26127|Hs108|chr12 (172 aa) initn: 474 init1: 243 opt: 454 Z-score: 387.0 bits: 78.3 E(32554): 3.1e-15 Smith-Waterman score: 454; 53.2% identity (80.6% similar) in 139 aa overlap (1-135:1-131) 10 20 30 40 50 60 pF1KE1 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD ::::::: :.:::.:.::::.:: :::::..:..::..:: ::. ::::. .. CCDS53 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMK--------QYQEEIQE 10 20 30 40 50 70 80 90 100 110 pF1KE1 MKDMSKYKPHILL----SQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM ........:. : .::: :::.:::::.:: ::::::.::::::::::.::..:. CCDS53 LNEVARHRPRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLL 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 VAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELE .:.: : ..: ...:: CCDS53 MASKKDDPGIIMKLKEQHSKIDMVHRNKSEGFFLDASRHILEAPQHGLERRHLEANQNVH 120 130 140 150 160 170 >>CCDS8709.1 FGFR1OP2 gene_id:26127|Hs108|chr12 (253 aa) initn: 630 init1: 243 opt: 454 Z-score: 384.5 bits: 78.4 E(32554): 4.3e-15 Smith-Waterman score: 574; 44.0% identity (68.5% similar) in 241 aa overlap (1-198:1-233) 10 20 30 40 50 60 pF1KE1 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD ::::::: :.:::.:.::::.:: :::::..:..::..:: ::. ::::. .. CCDS87 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMK--------QYQEEIQE 10 20 30 40 50 70 80 90 100 110 pF1KE1 MKDMSKYKPHILL----SQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM ........:. : .::: :::.:::::.:: ::::::.::::::::::.::..:. CCDS87 LNEVARHRPRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLL 60 70 80 90 100 110 120 130 pF1KE1 VAKKAVDAEPVLKAHQSHSA--------------------------------------EI .:.: : ..: ...:: :. CCDS87 MASKKDDPGIIMKLKEQHSKIDMVHRNKSEGFFLDASRHILEAPQHGLERRHLEANQNEL 120 130 140 150 160 170 140 150 160 170 180 190 pF1KE1 ESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELENKELRELLSISSES-LQARKEN ....:.: ::. :::::...:..: :: ::.. ::: ::: :::.:.:. :: :. ::.. CCDS87 QAHVDQITEMAAVMRKAIEIDEQQGCKEQERIFQLEQENKGLREILQITRESFLNLRKDD 180 190 200 210 220 230 200 pF1KE1 SMDTASQAIK . CCDS87 ASESTSLSALVTNSDLSLRKS 240 250 207 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:59:32 2016 done: Sun Nov 6 18:59:33 2016 Total Scan time: 2.100 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]