FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1661, 179 aa
  1>>>pF1KE1661 179 - 179 aa - 179 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1963+/-0.000807; mu= 13.0977+/- 0.048
 mean_var=58.6406+/-11.547, 0's: 0 Z-trim(106.6): 15  B-trim: 0 in 0/51
 Lambda= 0.167485
 statistics sampled from 9067 (9073) to 9067 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.279), width:  16
 Scan time:  1.940

The best scores are:                                      opt bits E(32554)
CCDS8982.1 IL22 gene_id:50616|Hs108|chr12          ( 179) 1155 287.0 4.1e-78


>>CCDS8982.1 IL22 gene_id:50616|Hs108|chr12               (179 aa)
 initn: 1155 init1: 1155 opt: 1155  Z-score: 1515.9  bits: 287.0 E(32554): 4.1e-78
Smith-Waterman score: 1155; 100.0% identity (100.0% similar) in 179 aa overlap (1-179:1-179)

               10        20        30        40        50        60
pF1KE1 MAALQKSVSSFLMGTLATSCLLLLALLVQGGAAAPISSHCRLDKSNFQQPYITNRTFMLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 MAALQKSVSSFLMGTLATSCLLLLALLVQGGAAAPISSHCRLDKSNFQQPYITNRTFMLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 KEASLADNNTDVRLIGEKLFHGVSMSERCYLMKQVLNFTLEEVLFPQSDRFQPYMQEVVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 KEASLADNNTDVRLIGEKLFHGVSMSERCYLMKQVLNFTLEEVLFPQSDRFQPYMQEVVP
               70        80        90       100       110       120

              130       140       150       160       170         
pF1KE1 FLARLSNRLSTCHIEGDDLHIQRNVQKLKDTVKKLGESGEIKAIGELDLLFMSLRNACI
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 FLARLSNRLSTCHIEGDDLHIQRNVQKLKDTVKKLGESGEIKAIGELDLLFMSLRNACI
              130       140       150       160       170         




179 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 14:46:28 2016 done: Sun Nov  6 14:46:29 2016
 Total Scan time:  1.940 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]