FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1655, 171 aa
  1>>>pF1KE1655 171 - 171 aa - 171 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7870+/-0.000852; mu= 9.6392+/- 0.051
 mean_var=62.8003+/-12.339, 0's: 0 Z-trim(105.7): 17  B-trim: 0 in 0/48
 Lambda= 0.161843
 statistics sampled from 8556 (8563) to 8556 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.651), E-opt: 0.2 (0.263), width:  16
 Scan time:  1.670

The best scores are:                                      opt bits E(32554)
CCDS8981.1 IL26 gene_id:55801|Hs108|chr12          ( 171) 1111 267.8 2.3e-72


>>CCDS8981.1 IL26 gene_id:55801|Hs108|chr12               (171 aa)
 initn: 1111 init1: 1111 opt: 1111  Z-score: 1412.7  bits: 267.8 E(32554): 2.3e-72
Smith-Waterman score: 1111; 100.0% identity (100.0% similar) in 171 aa overlap (1-171:1-171)

               10        20        30        40        50        60
pF1KE1 MLVNFILRCGLLLVTLSLAIAKHKQSSFTKSCYPRGTLSQAVDALYIKAAWLKATIPEDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 MLVNFILRCGLLLVTLSLAIAKHKQSSFTKSCYPRGTLSQAVDALYIKAAWLKATIPEDR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 IKNIRLLKKKTKKQFMKNCQFQEQLLSFFMEDVFGQLQLQGCKKIRFVEDFHSLRQKLSH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 IKNIRLLKKKTKKQFMKNCQFQEQLLSFFMEDVFGQLQLQGCKKIRFVEDFHSLRQKLSH
               70        80        90       100       110       120

              130       140       150       160       170 
pF1KE1 CISCASSAREMKSITRMKRIFYRIGNKGIYKAISELDILLSWIKKLLESSQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 CISCASSAREMKSITRMKRIFYRIGNKGIYKAISELDILLSWIKKLLESSQ
              130       140       150       160       170 




171 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 22:30:16 2016 done: Sat Nov  5 22:30:16 2016
 Total Scan time:  1.670 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]