Result of FASTA (ccds) for
pFN21AE1652
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1652, 169 aa
1>>>pF1KE1652 169 - 169 aa - 169 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2337+/-0.000659; mu= 12.6548+/- 0.040
mean_var=60.0640+/-12.354, 0's: 0 Z-trim(110.0): 19 B-trim: 386 in 1/52
Lambda= 0.165488
statistics sampled from 11254 (11273) to 11254 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.741), E-opt: 0.2 (0.346), width: 16
Scan time: 1.760
The best scores are: opt bits E(32554)
CCDS2108.1 IL36G gene_id:56300|Hs108|chr2 ( 169) 1146 281.3 1.9e-76
CCDS62992.1 IL36G gene_id:56300|Hs108|chr2 ( 134) 779 193.7 3.7e-50
CCDS42734.1 IL36A gene_id:27179|Hs108|chr2 ( 158) 616 154.8 2.2e-38
CCDS2110.1 IL36B gene_id:27177|Hs108|chr2 ( 157) 461 117.8 3e-27
CCDS2107.1 IL37 gene_id:27178|Hs108|chr2 ( 192) 313 82.5 1.6e-16
CCDS2104.1 IL37 gene_id:27178|Hs108|chr2 ( 197) 313 82.5 1.6e-16
CCDS2103.1 IL37 gene_id:27178|Hs108|chr2 ( 218) 313 82.5 1.7e-16
CCDS2109.1 IL36B gene_id:27177|Hs108|chr2 ( 164) 259 69.6 1e-12
CCDS2105.1 IL37 gene_id:27178|Hs108|chr2 ( 157) 258 69.3 1.2e-12
CCDS2106.1 IL37 gene_id:27178|Hs108|chr2 ( 178) 258 69.3 1.3e-12
CCDS2112.1 IL1F10 gene_id:84639|Hs108|chr2 ( 152) 232 63.1 8.4e-11
>>CCDS2108.1 IL36G gene_id:56300|Hs108|chr2 (169 aa)
initn: 1146 init1: 1146 opt: 1146 Z-score: 1486.0 bits: 281.3 E(32554): 1.9e-76
Smith-Waterman score: 1146; 100.0% identity (100.0% similar) in 169 aa overlap (1-169:1-169)
10 20 30 40 50 60
pF1KE1 MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY
70 80 90 100 110 120
130 140 150 160
pF1KE1 RAKTGRTSTLESVAFPDWFIASSKRDQPIILTSELGKSYNTAFELNIND
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS21 RAKTGRTSTLESVAFPDWFIASSKRDQPIILTSELGKSYNTAFELNIND
130 140 150 160
>>CCDS62992.1 IL36G gene_id:56300|Hs108|chr2 (134 aa)
initn: 894 init1: 779 opt: 779 Z-score: 1014.0 bits: 193.7 E(32554): 3.7e-50
Smith-Waterman score: 826; 78.7% identity (79.3% similar) in 169 aa overlap (1-169:1-134)
10 20 30 40 50 60
pF1KE1 MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVIT
:::::::::::::::::: .::::::
CCDS62 MRGTPGDADGGGRAVYQS-----------------------------------ITVAVIT
10 20
70 80 90 100 110 120
pF1KE1 CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY
30 40 50 60 70 80
130 140 150 160
pF1KE1 RAKTGRTSTLESVAFPDWFIASSKRDQPIILTSELGKSYNTAFELNIND
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 RAKTGRTSTLESVAFPDWFIASSKRDQPIILTSELGKSYNTAFELNIND
90 100 110 120 130
>>CCDS42734.1 IL36A gene_id:27179|Hs108|chr2 (158 aa)
initn: 617 init1: 561 opt: 616 Z-score: 802.6 bits: 154.8 E(32554): 2.2e-38
Smith-Waterman score: 616; 59.9% identity (87.8% similar) in 147 aa overlap (22-167:10-156)
10 20 30 40 50 60
pF1KE1 MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVIT
: :.:.:.:..::.:: :.:.::::.: ..:::.:.:.
CCDS42 MEKALKIDTPQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALIS
10 20 30 40
70 80 90 100 110 120
pF1KE1 CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY
:.. :.::. ::.:::::... ..::.: :::.::::::::. :::::.:::::: ::::
CCDS42 CRHVETLEKDRGNPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFY
50 60 70 80 90 100
130 140 150 160
pF1KE1 RAKTGRTSTLESVAFPDWFIA-SSKRDQPIILTSELGKSYNTAFELNIND
....::.::.:::::: :::: ::. :.:::.::::. .: : :..
CCDS42 HSQSGRNSTFESVAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF
110 120 130 140 150
>>CCDS2110.1 IL36B gene_id:27177|Hs108|chr2 (157 aa)
initn: 462 init1: 388 opt: 461 Z-score: 602.6 bits: 117.8 E(32554): 3e-27
Smith-Waterman score: 461; 45.0% identity (74.2% similar) in 151 aa overlap (17-166:4-154)
10 20 30 40 50 60
pF1KE1 MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVIT
: : . .: : :.::.:.:..:.:.: : :. :::. .:.
CCDS21 MNPQREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIA
10 20 30 40
70 80 90 100 110 120
pF1KE1 CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY
:. : .. .:. .::::.. ..::.: .. .:::::::..::::: . . :::::.
CCDS21 CRDTEFSDKEKGNMVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFF
50 60 70 80 90 100
130 140 150 160
pF1KE1 RAKTGRTSTLESVAFPDWFIASSKRD-QPIILTSELGKSYNTAFELNIND
. : : ::...::..: ::::.: . :::.::.: : . :: : :.
CCDS21 HNKEGSTSVFQSVSYPGWFIATSTTSGQPIFLTKERGITNNTNFYLDSVE
110 120 130 140 150
>>CCDS2107.1 IL37 gene_id:27178|Hs108|chr2 (192 aa)
initn: 264 init1: 120 opt: 313 Z-score: 410.3 bits: 82.5 E(32554): 1.6e-16
Smith-Waterman score: 313; 36.3% identity (67.8% similar) in 146 aa overlap (22-163:31-175)
10 20 30 40 50
pF1KE1 MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSV
: .:.: ...: .:.. ::.::: .. .
CCDS21 MSGCDRRETETKGKNSFKKRLRGPKVKNLNPKKFSIHDQDHKVLVLDSGNLIAVPDKNYI
10 20 30 40 50 60
60 70 80 90 100
pF1KE1 TPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQ--PTLQLKEQKIMDLYG
: ... . : . .:.:: ::... :.::::.: : :.::::..:.: : .
CCDS21 RPEIFFALASSLSSASAE-KGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAA
70 80 90 100 110
110 120 130 140 150 160
pF1KE1 QPEPVK-PFLFYRAKTGRTSTLESVAFPDWFIASSKR-DQPIILTSELGKSYNTAFELNI
: : .. ::.::::..: . :::.: : ::: .: ..:. .:... . . :
CCDS21 QKESARRPFIFYRAQVGSWNMLESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQP
120 130 140 150 160 170
pF1KE1 ND
CCDS21 VCKAEMSPSEVSD
180 190
>>CCDS2104.1 IL37 gene_id:27178|Hs108|chr2 (197 aa)
initn: 264 init1: 120 opt: 313 Z-score: 410.1 bits: 82.5 E(32554): 1.6e-16
Smith-Waterman score: 313; 36.3% identity (67.8% similar) in 146 aa overlap (22-163:36-180)
10 20 30 40 50
pF1KE1 MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSV
: .:.: ...: .:.. ::.::: .. .
CCDS21 ENSGVKMGSEDWEKDEPQCCLEGPKVKNLNPKKFSIHDQDHKVLVLDSGNLIAVPDKNYI
10 20 30 40 50 60
60 70 80 90 100
pF1KE1 TPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQ--PTLQLKEQKIMDLYG
: ... . : . .:.:: ::... :.::::.: : :.::::..:.: : .
CCDS21 RPEIFFALASSLSSASAE-KGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE1 QPEPVK-PFLFYRAKTGRTSTLESVAFPDWFIASSKR-DQPIILTSELGKSYNTAFELNI
: : .. ::.::::..: . :::.: : ::: .: ..:. .:... . . :
CCDS21 QKESARRPFIFYRAQVGSWNMLESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQP
130 140 150 160 170 180
pF1KE1 ND
CCDS21 VCKAEMSPSEVSD
190
>>CCDS2103.1 IL37 gene_id:27178|Hs108|chr2 (218 aa)
initn: 264 init1: 120 opt: 313 Z-score: 409.4 bits: 82.5 E(32554): 1.7e-16
Smith-Waterman score: 313; 36.3% identity (67.8% similar) in 146 aa overlap (22-163:57-201)
10 20 30 40 50
pF1KE1 MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSV
: .:.: ...: .:.. ::.::: .. .
CCDS21 EDPAGSPLEPGPSLPTMNFVHTSPKVKNLNPKKFSIHDQDHKVLVLDSGNLIAVPDKNYI
30 40 50 60 70 80
60 70 80 90 100
pF1KE1 TPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQ--PTLQLKEQKIMDLYG
: ... . : . .:.:: ::... :.::::.: : :.::::..:.: : .
CCDS21 RPEIFFALASSLSSASAE-KGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAA
90 100 110 120 130 140
110 120 130 140 150 160
pF1KE1 QPEPVK-PFLFYRAKTGRTSTLESVAFPDWFIASSKR-DQPIILTSELGKSYNTAFELNI
: : .. ::.::::..: . :::.: : ::: .: ..:. .:... . . :
CCDS21 QKESARRPFIFYRAQVGSWNMLESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQP
150 160 170 180 190 200
pF1KE1 ND
CCDS21 VCKAEMSPSEVSD
210
>>CCDS2109.1 IL36B gene_id:27177|Hs108|chr2 (164 aa)
initn: 228 init1: 228 opt: 259 Z-score: 341.7 bits: 69.6 E(32554): 1e-12
Smith-Waterman score: 259; 39.4% identity (70.2% similar) in 94 aa overlap (17-110:4-97)
10 20 30 40 50 60
pF1KE1 MRGTPGDADGGGRAVYQSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVIT
: : . .: : :.::.:.:..:.:.: : :. :::. .:.
CCDS21 MNPQREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIA
10 20 30 40
70 80 90 100 110 120
pF1KE1 CKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFY
:. : .. .:. .::::.. ..::.: .. .:::::: : .: :.
CCDS21 CRDTEFSDKEKGNMVYLGIKGKDLCLFCAEIQGKPTLQLKLQGSQDNIGKDTCWKLVGIH
50 60 70 80 90 100
130 140 150 160
pF1KE1 RAKTGRTSTLESVAFPDWFIASSKRDQPIILTSELGKSYNTAFELNIND
CCDS21 TCINLDVRESCFMGTLDQWGIGVGRKKWKSSFQHHHLRKKDKDFSSMRTNIGMPGRM
110 120 130 140 150 160
>>CCDS2105.1 IL37 gene_id:27178|Hs108|chr2 (157 aa)
initn: 231 init1: 120 opt: 258 Z-score: 340.7 bits: 69.3 E(32554): 1.2e-12
Smith-Waterman score: 258; 42.3% identity (72.2% similar) in 97 aa overlap (71-163:44-140)
50 60 70 80 90
pF1KE1 NLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQ--PTLQ
.:.:: ::... :.::::.: : :.::
CCDS21 SEDWEKDEPQCCLEEIFFALASSLSSASAEKGSPILLGVSKGEFCLYCDKDKGQSHPSLQ
20 30 40 50 60 70
100 110 120 130 140 150
pF1KE1 LKEQKIMDLYGQPEPVK-PFLFYRAKTGRTSTLESVAFPDWFIASSKR-DQPIILTSELG
::..:.: : .: : .. ::.::::..: . :::.: : ::: .: ..:. .:...
CCDS21 LKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPGWFICTSCNCNEPVGVTDKFE
80 90 100 110 120 130
160
pF1KE1 KSYNTAFELNIND
. . :
CCDS21 NRKHIEFSFQPVCKAEMSPSEVSD
140 150
>>CCDS2106.1 IL37 gene_id:27178|Hs108|chr2 (178 aa)
initn: 231 init1: 120 opt: 258 Z-score: 339.8 bits: 69.3 E(32554): 1.3e-12
Smith-Waterman score: 258; 42.3% identity (72.2% similar) in 97 aa overlap (71-163:65-161)
50 60 70 80 90
pF1KE1 NLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGEQ--PTLQ
.:.:: ::... :.::::.: : :.::
CCDS21 EPGPSLPTMNFVHTKIFFALASSLSSASAEKGSPILLGVSKGEFCLYCDKDKGQSHPSLQ
40 50 60 70 80 90
100 110 120 130 140 150
pF1KE1 LKEQKIMDLYGQPEPVK-PFLFYRAKTGRTSTLESVAFPDWFIASSKR-DQPIILTSELG
::..:.: : .: : .. ::.::::..: . :::.: : ::: .: ..:. .:...
CCDS21 LKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPGWFICTSCNCNEPVGVTDKFE
100 110 120 130 140 150
160
pF1KE1 KSYNTAFELNIND
. . :
CCDS21 NRKHIEFSFQPVCKAEMSPSEVSD
160 170
169 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 18:18:49 2016 done: Sun Nov 6 18:18:49 2016
Total Scan time: 1.760 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]