FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1650, 164 aa
  1>>>pF1KE1650 164 - 164 aa - 164 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5453+/-0.000612; mu= 11.4122+/- 0.037
 mean_var=65.6345+/-13.021, 0's: 0 Z-trim(111.8): 6  B-trim: 573 in 1/54
 Lambda= 0.158310
 statistics sampled from 12662 (12666) to 12662 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.389), width:  16
 Scan time:  1.970

The best scores are:                                      opt bits E(32554)
CCDS31919.1 IL31 gene_id:386653|Hs108|chr12        ( 164) 1076 253.6   4e-68


>>CCDS31919.1 IL31 gene_id:386653|Hs108|chr12             (164 aa)
 initn: 1076 init1: 1076 opt: 1076  Z-score: 1336.5  bits: 253.6 E(32554): 4e-68
Smith-Waterman score: 1076; 100.0% identity (100.0% similar) in 164 aa overlap (1-164:1-164)

               10        20        30        40        50        60
pF1KE1 MASHSGPSTSVLFLFCCLGGWLASHTLPVRLLRPSDDVQKIVEELQSLSKMLLKDVEEEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MASHSGPSTSVLFLFCCLGGWLASHTLPVRLLRPSDDVQKIVEELQSLSKMLLKDVEEEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 GVLVSQNYTLPCLSPDAQPPNNIHSPAIRAYLKTIRQLDNKSVIDEIIEHLDKLIFQDAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GVLVSQNYTLPCLSPDAQPPNNIHSPAIRAYLKTIRQLDNKSVIDEIIEHLDKLIFQDAP
               70        80        90       100       110       120

              130       140       150       160    
pF1KE1 ETNISVPTDTHECKRFILTISQQFSECMDLALKSLTSGAQQATT
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ETNISVPTDTHECKRFILTISQQFSECMDLALKSLTSGAQQATT
              130       140       150       160    




164 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  9 12:21:46 2016 done: Wed Nov  9 12:21:46 2016
 Total Scan time:  1.970 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]