Result of FASTA (omim) for
pFN21AE1554
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1554, 273 aa
1>>>pF1KE1554 273 - 273 aa - 273 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1167+/-0.000353; mu= 7.1014+/- 0.022
mean_var=125.6837+/-25.590, 0's: 0 Z-trim(117.7): 203 B-trim: 1295 in 1/56
Lambda= 0.114402
statistics sampled from 29822 (30028) to 29822 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.352), width: 16
Scan time: 7.560
The best scores are: opt bits E(85289)
NP_002534 (OMIM: 602601,608446) oxidized low-densi ( 273) 1852 316.4 3.5e-86
NP_001166104 (OMIM: 602601,608446) oxidized low-de ( 189) 1249 216.8 2.4e-56
NP_001166103 (OMIM: 602601,608446) oxidized low-de ( 181) 907 160.4 2.3e-39
NP_922941 (OMIM: 606264,613108,614079) C-type lect ( 168) 412 78.6 8.3e-15
XP_011518989 (OMIM: 606782) PREDICTED: C-type lect ( 307) 413 79.0 1.2e-14
NP_922938 (OMIM: 606264,613108,614079) C-type lect ( 247) 411 78.6 1.3e-14
NP_072092 (OMIM: 606264,613108,614079) C-type lect ( 201) 404 77.4 2.4e-14
NP_001284678 (OMIM: 606782) C-type lectin domain f ( 188) 364 70.7 2.2e-12
NP_001284677 (OMIM: 606782) C-type lectin domain f ( 247) 361 70.3 3.9e-12
NP_057595 (OMIM: 606782) C-type lectin domain fami ( 280) 358 69.9 6.1e-12
NP_001284680 (OMIM: 606782) C-type lectin domain f ( 192) 349 68.3 1.3e-11
NP_001284679 (OMIM: 606782) C-type lectin domain f ( 192) 349 68.3 1.3e-11
XP_005272529 (OMIM: 604672,607948,609423,614371) P ( 266) 348 68.2 1.8e-11
NP_001138365 (OMIM: 604672,607948,609423,614371) C ( 268) 332 65.6 1.2e-10
NP_001138366 (OMIM: 604672,607948,609423,614371) C ( 360) 334 66.0 1.2e-10
NP_001138368 (OMIM: 604672,607948,609423,614371) C ( 380) 334 66.0 1.2e-10
NP_066978 (OMIM: 604672,607948,609423,614371) CD20 ( 404) 334 66.0 1.3e-10
NP_001138367 (OMIM: 604672,607948,609423,614371) C ( 312) 332 65.6 1.3e-10
NP_001138378 (OMIM: 605872) C-type lectin domain f ( 263) 326 64.6 2.3e-10
NP_997228 (OMIM: 612252) C-type lectin domain fami ( 241) 321 63.7 3.7e-10
NP_001138379 (OMIM: 605872) C-type lectin domain f ( 332) 310 62.0 1.7e-09
NP_001138381 (OMIM: 605872) C-type lectin domain f ( 353) 306 61.3 2.8e-09
NP_001138371 (OMIM: 604672,607948,609423,614371) C ( 243) 301 60.4 3.7e-09
XP_006722677 (OMIM: 605872) PREDICTED: C-type lect ( 343) 301 60.5 4.9e-09
NP_001138376 (OMIM: 605872) C-type lectin domain f ( 348) 301 60.5 4.9e-09
XP_006722676 (OMIM: 605872) PREDICTED: C-type lect ( 371) 301 60.5 5.2e-09
XP_006722675 (OMIM: 605872) PREDICTED: C-type lect ( 371) 301 60.5 5.2e-09
NP_001138377 (OMIM: 605872) C-type lectin domain f ( 375) 301 60.5 5.3e-09
NP_001138382 (OMIM: 605872) C-type lectin domain f ( 376) 301 60.5 5.3e-09
XP_006722674 (OMIM: 605872) PREDICTED: C-type lect ( 398) 301 60.5 5.5e-09
NP_055072 (OMIM: 605872) C-type lectin domain fami ( 399) 301 60.5 5.5e-09
XP_011518987 (OMIM: 606783) PREDICTED: C-type lect ( 196) 286 57.9 1.7e-08
NP_001092901 (OMIM: 606783) C-type lectin domain f ( 196) 286 57.9 1.7e-08
NP_031386 (OMIM: 611817) NKG2-D type II integral m ( 216) 284 57.6 2.3e-08
XP_016874885 (OMIM: 606783) PREDICTED: C-type lect ( 173) 279 56.7 3.5e-08
XP_016874884 (OMIM: 606783) PREDICTED: C-type lect ( 229) 279 56.8 4.4e-08
XP_005253439 (OMIM: 606783) PREDICTED: C-type lect ( 229) 279 56.8 4.4e-08
NP_057593 (OMIM: 606783) C-type lectin domain fami ( 229) 279 56.8 4.4e-08
NP_001138369 (OMIM: 604672,607948,609423,614371) C ( 398) 271 55.6 1.7e-07
NP_031360 (OMIM: 602894) natural killer cells anti ( 148) 258 53.2 3.4e-07
NP_001107868 (OMIM: 602894) natural killer cells a ( 179) 258 53.2 3.9e-07
XP_016874780 (OMIM: 602894) PREDICTED: natural kil ( 179) 258 53.2 3.9e-07
NP_002253 (OMIM: 602894) natural killer cells anti ( 179) 258 53.2 3.9e-07
NP_963917 (OMIM: 612088) C-type lectin domain fami ( 232) 256 53.0 6.1e-07
XP_011518873 (OMIM: 612088) PREDICTED: C-type lect ( 249) 256 53.0 6.5e-07
XP_011518872 (OMIM: 612088) PREDICTED: C-type lect ( 265) 256 53.0 6.8e-07
NP_612210 (OMIM: 612088) C-type lectin domain fami ( 265) 256 53.0 6.8e-07
XP_005253381 (OMIM: 612088) PREDICTED: C-type lect ( 265) 256 53.0 6.8e-07
NP_001193939 (OMIM: 612088) C-type lectin domain f ( 275) 256 53.0 7e-07
XP_006719096 (OMIM: 612088) PREDICTED: C-type lect ( 282) 256 53.0 7.2e-07
>>NP_002534 (OMIM: 602601,608446) oxidized low-density l (273 aa)
initn: 1852 init1: 1852 opt: 1852 Z-score: 1668.2 bits: 316.4 E(85289): 3.5e-86
Smith-Waterman score: 1852; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KE1 MTFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MTFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 SQVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLARKLNEKSKEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SQVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLARKLNEKSKEQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 MELHHQNLNLQETLKRVANCSAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MELHHQNLNLQETLKRVANCSAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 KINSTADLDFIQQAISYSSFPFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KINSTADLDFIQQAISYSSFPFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPS
190 200 210 220 230 240
250 260 270
pF1KE1 GTCAYIQRGAVYAENCILAAFSICQKKANLRAQ
:::::::::::::::::::::::::::::::::
NP_002 GTCAYIQRGAVYAENCILAAFSICQKKANLRAQ
250 260 270
>>NP_001166104 (OMIM: 602601,608446) oxidized low-densit (189 aa)
initn: 1249 init1: 1249 opt: 1249 Z-score: 1132.6 bits: 216.8 E(85289): 2.4e-56
Smith-Waterman score: 1249; 100.0% identity (100.0% similar) in 188 aa overlap (1-188:1-188)
10 20 30 40 50 60
pF1KE1 MTFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 SQVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLARKLNEKSKEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLARKLNEKSKEQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 MELHHQNLNLQETLKRVANCSAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELHHQNLNLQETLKRVANCSAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 KINSTADLDFIQQAISYSSFPFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPS
::::::::
NP_001 KINSTADLI
>>NP_001166103 (OMIM: 602601,608446) oxidized low-densit (181 aa)
initn: 904 init1: 904 opt: 907 Z-score: 827.8 bits: 160.4 E(85289): 2.3e-39
Smith-Waterman score: 907; 97.9% identity (98.6% similar) in 145 aa overlap (1-145:1-145)
10 20 30 40 50 60
pF1KE1 MTFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 SQVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLARKLNEKSKEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLARKLNEKSKEQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 MELHHQNLNLQETLKRVANCSAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLL
:::::::::::::::::::::. :
NP_001 MELHHQNLNLQETLKRVANCSGLHPASNFLFQFSILDGAVSEEPQLPMALGGRFSFDAPL
130 140 150 160 170 180
>>NP_922941 (OMIM: 606264,613108,614079) C-type lectin d (168 aa)
initn: 416 init1: 235 opt: 412 Z-score: 386.8 bits: 78.6 E(85289): 8.3e-15
Smith-Waterman score: 412; 36.5% identity (71.1% similar) in 159 aa overlap (113-270:10-168)
90 100 110 120 130 140
pF1KE1 GQISARQQAEEASQESENELKEMIETLARKLNEKSKEQMELHHQNLNLQETLKRVANCSA
:.: . :... :. . .... . :.
NP_922 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKGVLSS
10 20 30
150 160 170 180 190 200
pF1KE1 PCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFI-QQAISYSSFP
::: .:: . ..::::: . .:. :...: .: ..::::.:. .: :: .:. : .
NP_922 PCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNS
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE1 FWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQRGAVYAENCILAAF
::.:::: . :::::::: . .::..: ...: :: .:..:. ...: . : . ..
NP_922 FWIGLSRPQTEVPWLWEDGSTFSSNLFQIRTTATQENPSPNCVWIHVSVIYDQLCSVPSY
100 110 120 130 140 150
270
pF1KE1 SICQKKANLRAQ
:::.:: ..
NP_922 SICEKKFSM
160
>>XP_011518989 (OMIM: 606782) PREDICTED: C-type lectin d (307 aa)
initn: 342 init1: 188 opt: 413 Z-score: 383.8 bits: 79.0 E(85289): 1.2e-14
Smith-Waterman score: 415; 30.2% identity (59.5% similar) in 252 aa overlap (32-270:44-290)
10 20 30 40 50 60
pF1KE1 TFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQLS
: : .: :: .::: :.. . .::. .
XP_011 DDGDTTMSLHSQGSATTRHPEPRRTEHRAPSSTWRPVALTLLTLCLVLLIGLAALGLLFF
20 30 40 50 60 70
70 80 90 100 110 120
pF1KE1 QVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQ-ESENELKEMIETLARKLNEKSKEQ
: .: . : ........: :. : . :. .... . . :... : : :.: .:.
XP_011 QYYQLSNTGQDTISQMEERL-GNTSQELQSLQVQNIKLAGSLQHVAEKLCRELYNKAGGY
80 90 100 110 120 130
130 140 150 160 170
pF1KE1 MELHHQNLNLQETLKRVAN---------CSAPCPQDWIWHGENCYLFSSGSFNWEKSQEK
. .:.:... . :: :: ..: :::.::: : . : .:: .
XP_011 TRNMVPASASSESLRQLPHMGESAAAHRCS-PCTEQWKWHGDNCYQFYKDSKSWEDCKYF
140 150 160 170 180 190
180 190 200 210 220
pF1KE1 CLSLDAKLLKINSTADLDFIQQAISYSSF--PFWMGLSRRNPSYPWLWEDGSPLMPHLFR
::: .. .::::. ::.: . ::: : .: :: : . . ::: ::.:. .::.
XP_011 CLSENSTMLKINKQEDLEFAASQ-SYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFH
200 210 220 230 240 250
230 240 250 260 270
pF1KE1 VRGAVSQTYP-SGTCAYIQRGAVYAENCILAAFSICQKKANLRAQ
. .. : : : :. : : .....: .:...:..
XP_011 I--IIDVTSPRSRDCVAILNGMIFSKDCKELKRCVCERRAGMVKPESLHVPPETLGEGD
260 270 280 290 300
>>NP_922938 (OMIM: 606264,613108,614079) C-type lectin d (247 aa)
initn: 476 init1: 235 opt: 411 Z-score: 383.4 bits: 78.6 E(85289): 1.3e-14
Smith-Waterman score: 440; 31.9% identity (59.2% similar) in 260 aa overlap (16-270:21-247)
10 20 30 40 50
pF1KE1 MTFDDLKIQTVKDQPDEKSNGKKA----KGLQFLYSPWWCLAAATLGVLCLGLVV
: .:: . : :: . :: : : :. ::.::: ..:
NP_922 MEYHPDLENLDEDGYTQLHFDSQSNTRIAVVSEKG-SCAASPPWRLIAVILGILCLVILV
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 TIMVLGMQLSQVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQESENELKEMIETLAR
.::: . :. .. : : . .:.. :. :: ... :.. .
NP_922 IAVVLGTMAIWRSNSGSNTLEN---------GYFLSRNK-ENHSQPTQSSLEDSVTPT--
60 70 80 90 100
120 130 140 150 160 170
pF1KE1 KLNEKSKEQMELHHQNLNLQETLKRVANCSAPCPQDWIWHGENCYLFSSGSFNWEKSQEK
...: .. :.::: .:: . ..::::: . .:. :...
NP_922 --------------------KAVKTTGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQ
110 120 130 140
180 190 200 210 220 230
pF1KE1 CLSLDAKLLKINSTADLDFI-QQAISYSSFPFWMGLSRRNPSYPWLWEDGSPLMPHLFRV
: .: ..::::.:. .: :: .:. : . ::.:::: . :::::::: . .::..
NP_922 CWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQI
150 160 170 180 190 200
240 250 260 270
pF1KE1 RGAVSQTYPSGTCAYIQRGAVYAENCILAAFSICQKKANLRAQ
: ...: :: .:..:. ...: . : . ..:::.:: ..
NP_922 RTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKKFSM
210 220 230 240
>>NP_072092 (OMIM: 606264,613108,614079) C-type lectin d (201 aa)
initn: 476 init1: 235 opt: 404 Z-score: 378.5 bits: 77.4 E(85289): 2.4e-14
Smith-Waterman score: 404; 41.2% identity (74.0% similar) in 131 aa overlap (141-270:71-201)
120 130 140 150 160 170
pF1KE1 RKLNEKSKEQMELHHQNLNLQETLKRVANCSAPCPQDWIWHGENCYLFSSGSFNWEKSQE
:.::: .:: . ..::::: . .:. :..
NP_072 PPWRLIAVILGILCLVILVIAVVLGTMGVLSSPCPPNWIIYEKSCYLFSMSLNSWDGSKR
50 60 70 80 90 100
180 190 200 210 220
pF1KE1 KCLSLDAKLLKINSTADLDFI-QQAISYSSFPFWMGLSRRNPSYPWLWEDGSPLMPHLFR
.: .: ..::::.:. .: :: .:. : . ::.:::: . :::::::: . .::.
NP_072 QCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTEVPWLWEDGSTFSSNLFQ
110 120 130 140 150 160
230 240 250 260 270
pF1KE1 VRGAVSQTYPSGTCAYIQRGAVYAENCILAAFSICQKKANLRAQ
.: ...: :: .:..:. ...: . : . ..:::.:: ..
NP_072 IRTTATQENPSPNCVWIHVSVIYDQLCSVPSYSICEKKFSM
170 180 190 200
>>NP_001284678 (OMIM: 606782) C-type lectin domain famil (188 aa)
initn: 263 init1: 188 opt: 364 Z-score: 343.2 bits: 70.7 E(85289): 2.2e-12
Smith-Waterman score: 364; 33.7% identity (60.7% similar) in 163 aa overlap (113-270:12-171)
90 100 110 120 130 140
pF1KE1 GQISARQQAEEASQESENELKEMIETLARKLNEKSKEQMELHHQN--LNLQETLKRVANC
:.. . : :: :. . . .:.:.
NP_001 MQAKYSSTRDMLDDDGDTTMSLHSQGSATTRHPEPRRTAHR
10 20 30 40
150 160 170 180 190 200
pF1KE1 SAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSF
.:: ..: :::.::: : . : .:: . ::: .. .::::. ::.: . ::: :
NP_001 CSPCTEQWKWHGDNCYQFYKDSKSWEDCKYFCLSENSTMLKINKQEDLEFAASQ-SYSEF
50 60 70 80 90 100
210 220 230 240 250
pF1KE1 --PFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYP-SGTCAYIQRGAVYAENCI
.: :: : . . ::: ::.:. .::.. .. : : : :. : : .....:
NP_001 FYSYWTGLLRPDSGKAWLWMDGTPFTSELFHI--IIDVTSPRSRDCVAILNGMIFSKDCK
110 120 130 140 150
260 270
pF1KE1 LAAFSICQKKANLRAQ
.:...:..
NP_001 ELKRCVCERRAGMVKPESLHVPPETLGEGD
160 170 180
>>NP_001284677 (OMIM: 606782) C-type lectin domain famil (247 aa)
initn: 263 init1: 188 opt: 361 Z-score: 338.8 bits: 70.3 E(85289): 3.9e-12
Smith-Waterman score: 377; 30.2% identity (56.9% similar) in 232 aa overlap (59-270:4-230)
30 40 50 60 70 80
pF1KE1 FLYSPWWCLAAATLGVLCLGLVVTIMVLGMQLSQVSDLLTQE---QANLTHQKKKLEGQI
. :.. :.: .. .: : . .
NP_001 MQAKYSSTRDMLDDDGDTTMSLHSQGSATTRHP
10 20 30
90 100 110 120 130
pF1KE1 SARQQAEEASQESENELKEMIETLARKLNEKSKEQMELHHQNLNLQETLKRVAN------
:. . . : : : .. : . ..:.. :.: . :. ::..: .:..::.
NP_001 EPRRTVFQYYQLS-NTGQDTISQMEERLGNTSQELQSLQVQNIKLAGSLQHVAEKLCREL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE1 --------CSAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFI
:: :: ..: :::.::: : . : .:: . ::: .. .::::. ::.:
NP_001 YNKAGAHRCS-PCTEQWKWHGDNCYQFYKDSKSWEDCKYFCLSENSTMLKINKQEDLEFA
100 110 120 130 140 150
200 210 220 230 240
pF1KE1 QQAISYSSF--PFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTYP-SGTCAYIQR
. ::: : .: :: : . . ::: ::.:. .::.. .. : : : :. :
NP_001 ASQ-SYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFHI--IIDVTSPRSRDCVAILN
160 170 180 190 200
250 260 270
pF1KE1 GAVYAENCILAAFSICQKKANLRAQ
: .....: .:...:..
NP_001 GMIFSKDCKELKRCVCERRAGMVKPESLHVPPETLGEGD
210 220 230 240
>>NP_057595 (OMIM: 606782) C-type lectin domain family 1 (280 aa)
initn: 304 init1: 188 opt: 358 Z-score: 335.4 bits: 69.9 E(85289): 6.1e-12
Smith-Waterman score: 402; 30.9% identity (58.8% similar) in 243 aa overlap (32-270:44-263)
10 20 30 40 50 60
pF1KE1 TFDDLKIQTVKDQPDEKSNGKKAKGLQFLYSPWWCLAAATLGVLCLGLVVTIMVLGMQLS
: : .: :: .::: :.. . .::. .
NP_057 DDGDTTMSLHSQGSATTRHPEPRRTEHRAPSSTWRPVALTLLTLCLVLLIGLAALGLLFF
20 30 40 50 60 70
70 80 90 100 110 120
pF1KE1 QVSDLLTQEQANLTHQKKKLEGQISARQQAEEASQ-ESENELKEMIETLARKLNEKSKEQ
: .: . : ........: :. : . :. .... . . :... : : :.: .:.
NP_057 QYYQLSNTGQDTISQMEERL-GNTSQELQSLQVQNIKLAGSLQHVAEKLCRELYNKAGA-
80 90 100 110 120 130
130 140 150 160 170 180
pF1KE1 MELHHQNLNLQETLKRVANCSAPCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLL
:. :: :: ..: :::.::: : . : .:: . ::: .. .:
NP_057 ----HR-------------CS-PCTEQWKWHGDNCYQFYKDSKSWEDCKYFCLSENSTML
140 150 160 170
190 200 210 220 230
pF1KE1 KINSTADLDFIQQAISYSSF--PFWMGLSRRNPSYPWLWEDGSPLMPHLFRVRGAVSQTY
:::. ::.: . ::: : .: :: : . . ::: ::.:. .::.. .. :
NP_057 KINKQEDLEFAASQ-SYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFHI--IIDVTS
180 190 200 210 220 230
240 250 260 270
pF1KE1 P-SGTCAYIQRGAVYAENCILAAFSICQKKANLRAQ
: : :. : : .....: .:...:..
NP_057 PRSRDCVAILNGMIFSKDCKELKRCVCERRAGMVKPESLHVPPETLGEGD
240 250 260 270 280
273 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:43:35 2016 done: Sun Nov 6 22:43:36 2016
Total Scan time: 7.560 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]